Syngnathoides biaculeatus (alligator pipefish): 133511357
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Entry
133511357 CDS
T09681
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133511357
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
133511357
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_14
Ig_2
LRRNT
LRR_6
LRR_LRWD1
LRR_9
V-set
Motif
Other DBs
NCBI-GeneID:
133511357
NCBI-ProteinID:
XP_061696184
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All DBs
Position
13:11389051..11442700
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AA seq
622 aa
AA seq
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MIGSPGPGGRALVPWPKMWRAVLVASLVAVLTLTLPGSSQACPPRCECSAQLRSVSCQRR
RLTNIPEGIPTETQLLDLSRNRLRWVQAGDLAPYPRLEEVDFSENLIATLEPNSFASLPN
LKVLKLRSNQLKLVPMGAFAKLGNLTSLDLSENKIVILLDYTFQDLKSLKHLEVGDNDLV
YISHKAFSGLLGLEDLTIARCNLTSISGQTLSYLRSLVTLRLHHLSIMALEDQNFRKLSN
LRGLDINHWPYLEYISPLSFQGLDLHWLSITNTNLSSVPSGSFKNMVHLTHLNLSYNPIT
ALEPWAFKDLLRLKELIMVSTGLMAVEPHALGGLRQLRVLNFSSNDLQTLEEGSFHSVNS
LETLRVDGNPLMCDCRLLWILQRRKTLNFDGRVPICAGPVEVQGVSLSSFTDSALFDHFT
CQKPKIRNRKLQQVTAREGQPVNFLCRAEGEPAPAIIWISPQRRRITAKSSGRVTVLPSG
TLEIRYAQLTDSGTYICIASNAGGNDTYFATLTVRSQPQDAASAFFFNRSLYSGEFFNDT
NLNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSF
RKSEPATGSSSGGTRKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgattggctcacctggccctggtgggcgtgccttagtgccatggccgaagatgtggcgg
gcggtcctggttgcttctctggttgccgtcttaactttgactctgccaggaagtagccag
gcctgtccgccacgctgcgagtgttcggctcagctgaggtcggtgtcgtgtcagcggcgg
cggctcaccaacatccctgaaggcatccccaccgagacacaactcctggatctcagcagg
aaccgactccgatgggtgcaagccggtgatctggcgccgtacccccggctggaggaggtg
gatttcagtgaaaacctcatcgccacattagagcccaactccttcgcaagtctgcccaat
ctcaaagttctgaagttaaggagcaaccaactgaagttagtgcccatgggggcctttgcc
aaacttggcaatctgaccagccttgacctgagtgagaacaagattgtgattctgttggac
tacaccttccaggacctgaagagtctaaaacacctggaagtgggagacaatgatctggtt
tatatttcccacaaggcgttttcggggttgctgggactggaagatctcaccatagctcgc
tgcaacctgacctccatctcaggccagaccctgtcctacctgcgcagcctggtcaccctc
cgccttcatcacctcagcatcatggctcttgaggaccagaatttcagaaagctctcaaac
ttgagaggtctcgacatcaaccactggccatacctggagtacatttcacctctcagtttc
cagggtcttgatctccactggctctccattacaaacaccaacctctcctctgtcccctcc
ggttctttcaaaaacatggtacatctaacccacctcaacctttcctacaaccccatcaca
gcactggagccttgggccttcaaagacttgctgaggttgaaggaactcatcatggtcagc
acagggttgatggcggtggagccccacgccctcggaggacttcgtcagcttcgggtcctc
aacttctcctcaaacgacctgcagactttggaggagggttccttccactctgttaacagt
ctggagacactcagagtggatgggaaccctctcatgtgtgactgccgtctgttgtggatc
ctgcaaaggcgcaagaccctcaactttgacggcagagtgccaatttgtgcagggcctgtg
gaggtgcaaggcgtcagcctgagtagcttcaccgattccgcactctttgatcattttacg
tgccagaaacctaaaattcgcaaccgcaagcttcagcaggtgacagctcgtgagggccag
cccgtgaatttcctctgccgtgccgaaggagaaccagcacccgctatcatctggatttcc
cctcagcgtcgacggatcactgccaaaagctcgggccgcgtcaccgttctcccgagtggc
accttggagatccgctacgctcagcttactgacagcggaacatatatctgcatcgccagt
aacgctgggggcaatgacacctacttcgctacgctcacagtacgcagccagccgcaagat
gctgcctcagcctttttcttcaatcgctcactgtacagcggcgagttcttcaatgacaca
aatctgaacagcactcgggtgtttctcaaatttaccttggacttgacaaccatcctggtc
tccacagcaatgggttgcatcaccttcctgggggtggtccttttctgtttcttgctgttg
ttcgtgtggagtcggggacgcggccaacgtaagaataacttcacggtggagtactctttc
cgcaaatccgagcccgcgaccgggagctcttcgggagggaccaggaagtttaacatgaaa
atgatatga
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