Syngnathoides biaculeatus (alligator pipefish): 133511394
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Entry
133511394 CDS
T09681
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133511394 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133511394 (gtf2b)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
133511394 (gtf2b)
Prokaryotic type
Archaeal type
TFB
133511394 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Auto_anti-p27
Motif
Other DBs
NCBI-GeneID:
133511394
NCBI-ProteinID:
XP_061696259
LinkDB
All DBs
Position
13:13957888..13965405
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AA seq
325 aa
AA seq
DB search
MGCSTCDTSEDKRGDGATLPRVQCPNHPDAILVEDYRAGDMVCPECGLVVGDRVIDVGSE
WRTFSNEKALKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSD
RAMLNAFKEITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQE
GVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMA
ATYIAMKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRL
IYPRAAELFPPDFKFDTPVDKLPQL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcagcacttgtgacaccagtgaggataagcgtggagacggagcaacccttccg
agagttcagtgtcccaaccaccccgatgcaattctggtggaggactaccgggcaggggac
atggtttgccccgagtgtggtcttgtcgtaggtgatcgagtgattgatgttggctctgag
tggaggacgttttccaacgagaaagccctcaaagacccatccagagtgggagatgcccag
aacccactgctgaatggaggagacctcaccaccatgatcagcaaggggactggcgccgct
agctttgatgagtttggcaactccaagtaccagaaccgccgcaccatgagcagctcggac
cgcgccatgctcaacgccttcaaagagatcaccactatggcggatcgcatcaacttgccg
aggaacatcatagatagaaccaacaacctattcaagcaagtttatgaacaaaagagcctg
aagggcagagcgaacgacgccatcgcatcggcttgcctctacatcgcctgcagacaagaa
ggcgtcccgagaacgtttaaagagatctgcgccgtgtcccgcatctccaagaaggagatc
ggccgctgcttcaagctgatcctgaaggccctggagaccagcgtggacctgattaccacg
ggagacttcatgtcccgtttctgctccaacctgggcctgcccaagcaggtgcagatggcc
gccacctacatcgccatgaaggccgtggagctggacctggtgcccggcaggagccccatc
tccgtggccgccgccgccatctatatggcttcgcaggcctccgccgagaagaagacgcag
aaagaaatcggagacatcgccggtgtcgcagacgtcaccatccgacagtcgtaccggctc
atctaccctcgcgccgcggaacttttcccaccggacttcaaattcgacacgcctgtcgac
aagctgccccaactgtga
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