Syngnathoides biaculeatus (alligator pipefish): 133511415
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Entry
133511415 CDS
T09681
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133511415 (smc5)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
133511415 (smc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
DUF8567
ODF2_C
AAA_29
AAA_25
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
133511415
NCBI-ProteinID:
XP_061696291
LinkDB
All DBs
Position
2:20535047..20566643
Genome browser
AA seq
1089 aa
AA seq
DB search
MATQKKKIRYSNGGQSSAASVLTSRRPSEVNEADDGFVEGSVVRITMKNFICLGEVNGYL
LPWRSWTYNYIMVRPGPNLNMIIGANGTGKSSIVCAICLSLAGKTTVLGRDDKVGGYVKT
GCDKGFVEIELFKSGGNVIINREIHVENNQSVWKLNGRICNQKTVEEEVKALHIQVNNLC
QFLPQEKVGQFAKMSKIELLEATEKSVGSPEMFEYHCELKNSRSKDREMENVIKEKTSYL
EKTKQRFERHKLDENRYYEKQRHLNAIELIEKKIPWVEYETTREELEGVKKERDKAKKQL
AVLKQAHMPMLTKLQSIEEHLKPSEEQMKAKSAAIKEASSKCKLKRDQLDRMHKDIEDIK
QAFKMKQTEEEDQTKRIKNIILMIEDLKVVLAEVDKQPDVTPRITEVNAELRQIQTEREK
VQKQKADLRQEKDNLSAELRMLEKKLTDMNNVMTMKEEKLRGRHRDTHTAVEWLRQHRDL
FSGNVCEPLMLVINMKDHRFAKYLENHISFNDLRAFVFQRKEDMDKFLFEVRDKMSLRIN
VIIAPTETWSRAPPSRHIESLRRFGFFTYLRETFDAPEEVMSYLCQQYKVHEIPIGNEQT
EAMIATVIKEPYIKVLYTKDQKYTVKKSFYSNITSTKNTTVYPSKYLSITVDAEQKRQLE
QQMNVCRSKLRDIDERLNIIQNEATALDRRDNELLSEKKNLLESKGKKRQLEQKISTKQD
RLKQLEHSGIDLKKAEAETKKKIIAVNSKKKSVVTTLIEQIKLQAKLTMEKEYLALEMMG
LLAEKTKLENLCREGTSGLKAMTHQCSQLEESAAQLKIQCKENMERAKSICKMQPNETLP
RNLHDAFSKLPNTLDELDAMLNEERSRAESFPGLTKKVVEECNKQAQEIKQLEQELTEKN
AALIAFRQKMSEAKEYWLTPLKQLVQQINKKFSDFFRALECTGEVDLHYDNEDEYDKYGI
SILVKFHESSQLHELTQFHQSGGERSVATMLYLMALQELIRCPFRVVDEINQGMDSINER
KVFDILVHTACKERTSQYFFITPKLLQNLTYVEEMTILCVNNSSHMLCSNEWDESAFLQR
CQQKKKVQA
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggccactcaaaagaaaaaaattcgatacagtaatggcggtcaaagctcagcagccagc
gtcctgacgagcaggcggccgagtgaagtcaacgaggctgatgatggttttgtggagggg
tcggtagttcgcattaccatgaaaaacttcatatgcctgggcgaggttaatggatacctc
cttccatggagatcttggacatacaactacatcatggtgcgtcccggaccaaacctgaac
atgattattggagcgaacggaaccggcaagtccagcattgtgtgcgccatctgtctcagc
ctggcaggcaagaccactgtcctgggaagagatgacaaggtcggcggctacgtgaaaaca
ggatgtgacaaaggatttgttgaaattgaactttttaagagtggtgggaatgtcataatt
aacagagagatccatgtggagaacaaccagtcagtgtggaagctcaacggaagaatttgt
aaccagaaaacagtggaggaggaagttaaggcgttgcatatccaagtcaataacctttgc
cagttcctgcctcaggaaaaagtggggcagtttgccaaaatgtccaaaatcgaattactg
gaggcaactgaaaagtctgtgggttccccagagatgttcgagtatcactgcgagctcaaa
aactctcgctccaaagatcgagaaatggagaacgttataaaggagaagaccagctaccta
gagaaaaccaaacagagatttgagcgacacaaacttgacgagaaccgttactatgaaaag
caaaggcatctgaatgcgattgagttaattgagaagaagataccctgggtggagtatgaa
accacccgcgaggagcttgagggtgtgaagaaggaacgagacaaggctaaaaagcagctc
gctgtcctcaagcaggcccatatgcccatgttgaccaagctccagtcgattgaagagcat
ttgaagcccagtgaagaacaaatgaaggcaaagagtgcagcaatcaaagaagcttcctcg
aaatgcaaactaaaacgagaccagttggatcgaatgcacaaagatattgaagacataaaa
caggcatttaaaatgaagcagactgaagaagaagatcagacgaagcgcatcaaaaacatc
atattgatgatcgaggacttgaaagtcgtacttgctgaagttgacaaacaacctgacgtg
acgccaaggatcactgaagtcaatgccgagttgaggcaaatccaaacggagagggagaaa
gtgcaaaaacagaaagccgacttgcgccaggagaaggacaacttatctgcagagttgaga
atgttggagaaaaagctcactgatatgaataacgtaatgacgatgaaagaggagaagctc
cggggacgccacagggacacacacacagctgtggaatggttgaggcagcacagagacctt
ttcagtggaaacgtgtgtgagcccttgatgcttgtgatcaacatgaaagatcatcgcttt
gccaagtacttggagaaccacatctccttcaatgacttaagggcttttgtcttccagagg
aaagaagacatggacaagttcttattcgaggtgcgtgacaaaatgagtttgagaatcaat
gttattattgctccgacagagacatggtcaagagctcctccatcgcgtcatattgagtct
ttgaggcgctttgggttcttcacctatctgcgtgagacctttgatgcccccgaggaggtg
atgagttacctctgtcagcagtataaagtgcacgagatccccataggcaacgagcagacc
gaagccatgatagcaacggtgataaaggagccgtacattaaggtgctctatacaaaagac
cagaagtacactgttaagaagtccttctactccaacattacctccaccaaaaacactaca
gtgtatccgtccaagtaccttagtatcacagtggacgctgagcagaaacggcaactggag
cagcagatgaacgtttgccgttcaaagttacgagacattgacgagcggttgaacataatc
caaaatgaagcgaccgcactggatcgccgtgacaatgagctgttgtcagagaagaagaac
ctcttggaatcaaagggcaaaaaaagacaactggaacagaaaatcagcaccaaacaggac
agactgaagcagctggagcacagtggaattgacctgaagaaggctgaggcagagacaaaa
aagaaaataattgctgtcaattccaagaagaaatccgtagttactacattgatagaacaa
attaagctgcaagccaaactgaccatggagaaggagtacctagcattggagatgatgggg
ctgttagcagagaagaccaagctggagaacctttgcagagaaggcacaagcggactaaaa
gccatgactcatcaatgcagccaattggaggagagtgcagcccagctgaaaatccagtgc
aaagagaacatggagagagccaaatcaatctgcaagatgcagcccaacgagacgttaccc
cgaaacttgcacgatgctttcagtaagctgccgaacacattggatgagttggatgccatg
ttgaatgaagagcggtccagagctgagagctttcctggactcactaaaaaggtggtcgag
gagtgcaacaagcaagcgcaggaaataaaacagttggaacaagaactgactgagaagaac
gcggccttaattgctttcagacagaagatgtcagaggctaaagaatattggctcacccct
ctgaaacaattggttcaacaaattaacaagaagttcagcgatttcttccgtgccttggag
tgtacaggagaagtggatttgcactatgacaatgaggatgaatatgacaagtatggcatt
agcattttggtcaagttccatgagagcagtcagctccatgagctgacacaattccatcag
agtggaggtgagcgcagcgtcgccaccatgttgtacctcatggccctgcaggagctcatc
cgctgccccttcagagtcgtggatgagatcaaccagggaatggattccatcaacgagagg
aaagtctttgacattcttgtccacacagcctgcaaagagaggacatctcagtactttttc
atcacacccaaactgctgcagaacctcacctatgttgaggagatgaccatcctttgtgtc
aacaacagctctcacatgctttgctccaatgagtgggacgagagtgctttccttcaacgc
tgtcaacaaaagaagaaagttcaggcgtga
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