Syngnathoides biaculeatus (alligator pipefish): 133511416
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Entry
133511416 CDS
T09681
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog isoform X1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03030
DNA replication
sbia03410
Base excision repair
sbia03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133511416 (zgc:110269)
03410 Base excision repair
133511416 (zgc:110269)
03450 Non-homologous end-joining
133511416 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbia03032
]
133511416 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133511416 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133511416 (zgc:110269)
DNA replication proteins [BR:
sbia03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
133511416 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
133511416 (zgc:110269)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
133511416 (zgc:110269)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133511416 (zgc:110269)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
Herpes_UL79
Motif
Other DBs
NCBI-GeneID:
133511416
NCBI-ProteinID:
XP_061696288
LinkDB
All DBs
Position
13:14111410..14118405
Genome browser
AA seq
376 aa
AA seq
DB search
MGITKLSELIRFEAPGAISHKDVSDYTGKVIALDTSIVMNQFRAVTPSLNPLTGLFFRTL
TLLEHDIKPVFVFDGRPPGEKFAALQKRAEAAGWRSFIHLGTGSLQTKKSVHLLKLLGVP
VVQAPGDAEALCAWLVREKTVEAVASEDMDTLPFGAHVLIRHLNAKKDSDIVEYSLPVLL
EKLQLTHKEFVDLCILLGCDYCDKIAGLGPKRALTLIQKYRTIENVILHINKMTYPVPNN
WKYKEARKLFLDAPHAETPELVWTEPDEEALVEFFCRCTYVKYIFICSILDVSPSLFHSY
PLDDCIGVFREERIRHRMARFRHIRESKRQQREKEMAKGHCTQTRMDDFFRVLRKREQTV
EPGDCGDSNRKKHKSK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggggatcactaaactatcagagttgatccgatttgaagctcccggcgcgatttctcac
aaagatgtcagtgactacacaggcaaggtcattgccttggatacatcaatcgtgatgaac
cagttccgggctgtaacaccgtcactgaacccattgactggcctcttctttcgcactctg
actctcctggagcatgacataaaacccgtgtttgtgtttgatggaagacctcccggagaa
aagtttgctgctcttcagaaacgagccgaggcagcaggttggcgctccttcatccatttg
ggcacaggatcactccaaacaaaaaaaagtgtccatctcctgaagcttctgggtgttcct
gtggtccaagctccaggagacgctgaggccctttgcgcttggctggtgagggaaaagact
gtagaagctgtggcatcagaggacatggacacgttgccatttggggctcatgttttgatt
cgtcacctgaatgccaagaaagacagtgacattgtggaatattccttacctgtgttgttg
gaaaagttacaactaactcacaaagagtttgttgacctgtgtatcttgctgggatgcgac
tactgcgataagatagcaggactcggtccaaagagggccctgacactcatccagaagtac
cgcaccatcgaaaatgttattttgcacatcaacaaaatgacctatccggtgccaaataac
tggaaatacaaagaggctcggaagttatttttggatgcaccgcacgccgaaacacccgag
ttggtgtggactgagccagatgaagaagctttggttgagttcttctgccgctgcacatat
gtcaagtacatattcatttgtagtattttggatgtgagtccctccctttttcacagctac
ccactcgatgactgtattggggtctttagggaggaaagaatccgtcatcgcatggcgaga
ttccgacacattcgggagagtaagcgacaacaaagggaaaaggagatggcaaaaggacac
tgcactcaaactcgaatggatgactttttcagagtgcttagaaagagggagcagactgtt
gaacccggggactgtggagacagcaacagaaagaaacacaaatcaaaatga
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