Syngnathoides biaculeatus (alligator pipefish): 133511440
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Entry
133511440 CDS
T09681
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133511440 (kcnn1a)
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
133511440 (kcnn1a)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Ion_trans
Motif
Other DBs
NCBI-GeneID:
133511440
NCBI-ProteinID:
XP_061696343
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All DBs
Position
13:13231048..13300732
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AA seq
980 aa
AA seq
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MRHRYAGAVYQHQNPQQKRASSKPSGEPADAPVFSLPPPPSSSHHRDRASTTDAHRRSLQ
ELPCVSQPARRAPQGGDTPPSASSCNAEGGVTGAPATLQQDPWAPAPVFPSCHCSFSTQE
ANHSQNQPHHRVAPPQPSPPFPPPIPPPPTTTATTSSSSSSLLFSRESKRGDRLGRSANN
YQQASNVERCRGGGGAGGQRDYRQLQQQQQQQQHCHPRLLPRDSSPEGIGANSQKRCTDR
RAFEPQAQEQQIPQLRARQQLLVGSSLPINHCASGSGELCRTHQAPLLHQQQQHQQQQQQ
QQQKQQHQNSAPGQHCEARERKKSARTPAPGDPQAQPHGATPPATQQADAAKSSATAGGS
NNSSNSSSRESPNYGSSYHLWPESPHKPGEERIRIELHKATTEKKKLSHAGSKPSLSESS
GRLPQIAMNTCKYNGGVVRPLVGSLASSSRRNLAELDSETQPLQTLHSSGLEVVVSKGNG
GEDPSKASNESLVREGSGRGRGRAPQKKNRDIGYKLGHRRALFEKRKRLSDYALIFGMFG
IVVMVTETELSWGVYTKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDW
RIAMTYERIFFIVLELLVCAIHPIPGQYVFTWKARLAFTYAPSVADADVDIILSIPMFLR
LYLIGRVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIA
AWTVRVCERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGC
TALVVAVVARKLELTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDH
AKVRKHQRKFLQAIHQLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDK
RIGTLEDKLDSVTGSLQALPCLISQAITQQQQDFLDGFVHRFRPASLASERSERSERSWT
STTRRRRSPSTAPHTSSDSG
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggtacgcgggagctgtctatcagcaccagaacccccagcaaaagcgagcc
agtagcaagccgagcggggagccagcagacgcgcctgttttcagcctgccgcccccgccc
tcttcttctcaccaccgagaccgcgcttcgactaccgacgctcaccgccggagcctccag
gagctcccgtgcgtgagccagcctgcacggcgagccccgcaaggtggggatacgccacct
tcggcgagctcctgcaacgccgaaggcggcgttaccggtgcgccggccaccttgcagcag
gatccctgggccccggccccggtttttccgagctgccactgcagcttttccacgcaggag
gcgaaccattcacaaaaccagccacaccatcgcgtcgcaccaccgcagccctccccacct
ttccccccgcctatacctccgccgccgaccaccaccgccacaacctcctcctcctcctcc
tcactgctgttttctcgggaatccaaacgaggggatcgtctgggaaggagcgccaataat
taccaacaggcgagcaacgtggaacgctgcaggggaggaggaggagcaggagggcaacga
gactacaggcagttgcagcagcagcagcagcagcagcaacactgtcatccaagactccta
ccgagggactcctcccctgaaggaatcggtgcaaactcacagaaaaggtgcacagacaga
cgagcattcgagccccaggcgcaggagcaacagattcctcaattaagagctcggcagcag
ctcctggtggggagcagcttgcctatcaaccactgcgccagcggctccggtgagctatgt
aggactcaccaggctccactgctgcatcaacagcagcagcatcaacagcagcagcagcag
cagcagcagaagcagcagcatcagaacagcgcaccggggcagcactgtgaagcccgagag
cgcaaaaagtccgcgaggacccccgcgccgggcgacccgcaggcgcagccgcacggcgca
acgcccccggcgacacagcaggcggacgcggccaagtcgagcgcgactgcaggcggcagc
aacaacagcagtaacagcagtagcagagagagccccaactacggctccagctatcacctg
tggcccgagagcccgcacaagccgggagaggagaggatacgcatcgagctccacaaggcc
acaactgagaagaagaagctgagccatgctggatccaagccctccctctccgagagcagc
ggccgactccctcagatagccatgaacacctgcaagtacaatggcggcgtggtgagacca
ctcgtgggcagtctggcgtcgtcgtcgcgccgcaacctcgcggagctcgactcggaaacg
cagcccctacagacgctgcacagctctggcctggaggtggtggtgtctaagggtaatggc
ggcgaagaccccagtaaggcgtccaatgagagcctggtcagggagggcagtgggcgtggc
agaggcagggcgccacaaaagaaaaacagggacattggctacaagctcggccaccggagg
gcactgttcgagaagcgaaagcggctcagcgactacgcgctcatctttggaatgtttggg
attgtagtcatggtgacggagactgaattgtcatggggggtttacactaaggaatcttca
tactcatttgcactgaaatgccttatcagcctttccactgttatactgcttggtcttata
ataatgtaccacgcacgggaaatccagctgtttatggtcgacaacggtgcagatgactgg
aggatagccatgacctatgagcggatcttcttcatcgtgctggagctgctggtgtgtgcc
atccatcccatccccggccagtacgtcttcacatggaaggcccggctggcttttacgtac
gcgccatccgtggcagatgccgacgtggacatcatcctctccatccccatgttcctgaga
ctttacctgatcggcagggtcatgctacttcatagcaagctgttcacggatgcttcgtct
cgcagcatcggcgccctaaacaagatcaacttcaacacacgctttgtcatgaaaacgctc
atgaccatctgcccaggaacagttctgctcgtgttcagtatatcgtcctggatcattgct
gcatggactgtgcgcgtctgcgagaggtatcatgacaaacaggaagtgaccagtaacttc
ctgggcgctatgtggctcatctcaattaccttcctctccattggttacggggacatggta
ccgcacacgtactgtgggaaaggcgtgtgtctgcttacagggattatgggagctggctgc
actgcacttgtagttgcagtggtagccaggaagctggagctgaccaaggcggagaagcac
gtccacaacttcatgatggatacgcaactctgcaaacgagtgaagaacacagctgccaat
gtactcagggaaacatggctcatctacaaacacaccaagttggtcaagaagattgatcac
gccaaggtgcggaaacaccagcgcaagtttctccaagccattcaccaactgcgcagtgtg
aagatggagcagaggaaactcaatgatcaggccaacacgttggtggacctggcgaagacc
cagaatgtgatgtatgacctggtgtcagaactccaggagcgcagcgaggagctggacaag
cgaatcggcacactggaggacaagctggactcggtgacgggcagcctgcaggcgctgccc
tgcctcatctcccaagccataacccagcagcagcaggacttcctggacggctttgttcac
cgcttccggcccgcgtcgctagcttcggagcgctccgaacgctccgagcgatcctggacg
tcgactacccgcaggcggcgctcgccgtccactgcaccacacacctcctccgacagtgga
taa
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