Syngnathoides biaculeatus (alligator pipefish): 133511742
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Entry
133511742 CDS
T09681
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133511742 (rfwd3)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133511742 (rfwd3)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133511742 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4
Beta-prop_WDR5
WD40
zf-rbx1
Beta-prop_THOC3
zf-C3HC4_2
zf-ANAPC11
WDR55
zf-C3HC4_3
zf-RING_5
WD40_CDC20-Fz
Rtf2
zf-RING_Vps41
Beta-prop_EML_2
EIF3I
zf-C3HC4_4
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
zf-RING_11
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
zf-UDP
RING_XB3-XBAT31
Beta-prop_WDR36-Utp21_1st
Beta-prop_SPT8
EPTP
Beta-prop_WDR75_1st
zf-Nse
Motif
Other DBs
NCBI-GeneID:
133511742
NCBI-ProteinID:
XP_061696604
LinkDB
All DBs
Position
14:complement(28341398..28348531)
Genome browser
AA seq
707 aa
AA seq
DB search
MTTSTGSRRGSPRESCRASQMEAMEVDPLQRDPPVPPAAPLVIADSGSSTEVEEDDGEGG
ARAAFPPGLPATWAFSQRSAGRGGAVASGLSPPPPRRRVRQGFRVHYSSQTAASSRTFPD
FLLRAPGAAVGADPPSSGTESSESEEDERARAAPPAPPRLDGADESGGAPRPATPPPGPD
GPRREEVGGDNGGSGVQRRRRLSFEPDAAAQSEEAEGDTCSICFEAWTAAGDHRVAALRC
GHLFGFTCIRKWLTSQRSAAKCPQCNKKAKRSDILLLYAPKLRAVDNSEHESLKKSLEEE
QSRRRKAELESAQYKLKLQVITNKFGRAQQELREMKARMVHAGGSSAAAAASSSPPRCAA
GSRLMAPYSFSDAVMVSANGGCRVLAHSEWLHCLVASQPSAHAALLPGYGVKKVSLAHIK
SSQYVPIHAAQIRGLCFNRQSAGLLLSASLDGTLKLTSLSANAVVQTYKADKPVWSCCWC
ADDPNYAYAGLSNGSVLLYDVRDTSAHVRELQPLRSRAPVASLCYIPRAASSSFPCGGLI
AGTLEGGYFWERGGDGAYEPHVLPLEAGSCTDIQVETESRHCLVTYRAGRGHPTVRCVLM
ALTQAPQQSSGESPAVSCLAVQTFSAGSSCKLLTKNAIFAGPHGSGALVCAGDEASQSTL
VWEASSGALLQKLPADLPVLDISPFTVNGEHFLASLTEKMLKLYKWK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgtcaacaggaagtcgccgtggaagcccgcgagaatcttgtcgcgctagccag
atggaggccatggaggtggaccccctccagcgcgacccccccgtcccccccgccgcccct
ctcgtcatcgccgactcgggcagcagcactgaagtggaggaggacgacggcgaaggggga
gcccgggcggcgttcccccccggacttcccgccacctgggctttcagtcagaggagtgcg
ggccgagggggcgccgtcgcctccgggctgtcgccgccgcccccgcggaggcgggtcagg
cagggcttccgggtgcactactccagccagacggccgcgtcctccagaaccttccccgac
ttccttctgcgagcccccggagccgccgtcggggccgacccgccgtccagcggcaccgag
tccagcgagtctgaggaggacgagcgcgcccgggccgccccgccggctccccctcgtctc
gacggcgccgacgagagcgggggggcgccccggcccgcgactccgccccccggtccagac
ggtccgagacgggaagaagtaggaggagataatggaggttccggcgtccagcgccgtcgt
cgtctgagttttgagccggacgcggcggcccagagcgaggaggccgaaggcgacacctgc
agcatctgcttcgaggcgtggacagcggcgggagaccatcgcgtcgccgccctgcgctgc
ggacatcttttcggattcacgtgcatccgcaaatggctgacctcgcagcgctctgctgcc
aaatgtccgcagtgcaacaagaaggcgaagcgctccgacattttgctgctgtacgccccc
aagctgagagcggtggacaacagcgagcacgagagcctcaagaagtctctggaggaggag
cagtcccggaggaggaaggccgagctggaatcggctcaatacaaactcaaacttcaggtc
atcaccaacaagtttgggcgagctcagcaggagctgcgggagatgaaagctaggatggtt
cacgcaggcgggagctcggccgccgccgccgcctcctcctccccgcctcgctgcgccgcc
gggtcccgcttgatggcgccgtacagcttctccgacgcggtgatggtgtcggccaacgga
ggctgccgggttctggcccacagcgagtggctccactgtctggtggcctcgcagccttcg
gctcacgctgcgctcctgcccggctacggcgtgaagaaggtgagcctggcccacatcaag
tccagccagtacgtccccatccacgccgctcagatccgaggtctgtgcttcaaccgtcag
agcgccggactgctgctgtccgcctcgctggacggcaccctcaagctcacgagcctgtcg
gccaacgcggtggtccagacgtacaaggcggacaagccggtgtggagctgctgctggtgc
gcggacgaccccaactacgcctacgcggggctcagcaacggctcggttctgctctacgac
gtcagagacaccagcgcccacgtgcgggagctgcagccgctgcgctccagggccccggtg
gcttcgctgtgctacatcccacgcgcggcgtccagctcgttcccgtgcggcggactgatc
gccggcacgctggagggcggctacttctgggagcgcggcggcgacggcgcgtacgagccc
cacgtcctgccgctggaggcgggaagctgcaccgacatccaggtggagacggagagccga
cactgcctggtcacgtaccgagccggccgcgggcacccgacggtgcgctgcgtcctgatg
gcgctgacgcaggcgccgcagcagagctccggcgagtcgcccgccgtctcctgtttggcc
gtgcagaccttcagcgccggctcgtcctgcaaactcctcaccaagaacgccatcttcgcc
ggcccgcacggatccggagccctggtgtgcgccggggacgaggcttctcagtccacgttg
gtgtgggaggcgtccagcggcgccctcctgcagaagcttccggccgacctgcccgtgctg
gacatctcgccgttcacggtgaacggcgagcacttcctggcctcgctgacagagaagatg
ctgaagctctacaagtggaagtga
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integrated database retrieval system
