Syngnathoides biaculeatus (alligator pipefish): 133511834
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Entry
133511834 CDS
T09681
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133511834 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133511834 (hspd1)
03110 Chaperones and folding catalysts [BR:
sbia03110
]
133511834 (hspd1)
03029 Mitochondrial biogenesis [BR:
sbia03029
]
133511834 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133511834 (hspd1)
Enzymes [BR:
sbia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
133511834 (hspd1)
Messenger RNA biogenesis [BR:
sbia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
133511834 (hspd1)
Chaperones and folding catalysts [BR:
sbia03110
]
Heat shock proteins
HSP60 / Chaperonin
133511834 (hspd1)
Mitochondrial biogenesis [BR:
sbia03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
133511834 (hspd1)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133511834 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
133511834 (hspd1)
Exosomal proteins of breast cancer cells
133511834 (hspd1)
Exosomal proteins of colorectal cancer cells
133511834 (hspd1)
Exosomal proteins of bladder cancer cells
133511834 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
133511834
NCBI-ProteinID:
XP_061696793
LinkDB
All DBs
Position
14:complement(6724621..6746520)
Genome browser
AA seq
573 aa
AA seq
DB search
MYRLPTMMKQVRPVCKTLAPHLTRAYAKDVKFGADARALMLQGVDLLADTVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMLAVETVISELKRLSKPVTTPEEIAQVATISANGDT
DIGSVISNAMKKVGRKGVITVKDGKTLHDELEVIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGTVFGDDAVGMALEDIQAHDFGKVGEVQITKDDTLLLKG
AGAPADVERRAAEIVEQLENTTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPSLDAIKPANADQKIGVDIIRRALRIPAVTIA
KNAGVEGSLVVEKILQGPAEMGYDAMLGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTEIPKEDKEMPAGGMGGMGGMGGGMGF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtctccccacaatgatgaagcaggtgaggcccgtgtgcaagactcttgcgcct
cacctcacacgtgcttacgctaaagacgtcaagttcggtgctgatgctcgtgccctaatg
ctgcaaggggttgacctgttggctgatacagttgctgtcaccatgggccctaagggccgt
acagtcatcatcgagcaaagctggggcagcccgaaggtgaccaaggacggtgtaactgtg
gcaaagagcatcgacttgaaggacaagtacaagaacattggtgccaagttggttcaggat
gtggccaacaacaccaacgaggaggcaggtgatggcaccactaccgccaccgtgctggca
cgtgccattgccaaggagggcttcgacaccatcagcaaaggcgccaaccctgtagagatc
cgtcgcggcgtcatgctggccgttgagactgtcatcagcgagctcaagcgcctctccaaa
cctgtcaccaccccagaggaaattgcacaggttgcaaccatctcagccaatggcgacaca
gatattgggagtgtcatctccaatgcaatgaagaaagttggtcgcaaaggagtcatcact
gtgaaggatgggaaaactcttcatgatgagctggaggtcattgagggtatgaagtttgac
cgtggttacatctccccatactttattaacaccgctaaaggtcagaaatgtgagttccag
gatgcttacctgctactcagtgaaaagaaaatctccagtgtccagagcatcgttcctgcc
ctggagatcgccaaccagcaccgcaagcccttggtcattgtggctgaggatgtggatgga
gaagccctcagcactcttgttcttaataggctgaaggttggtctgcaggtggttgcagtc
aaagcgccaggatttggggacaacaggaagaaccagctaaaggatatggccattgccacc
ggcggcactgttttcggtgacgatgctgtgggcatggctctggaggacatccaggcgcac
gactttggtaaagttggcgaggtgcagatcaccaaagacgacacgctgctcctgaagggc
gccggcgcacctgccgatgtcgagaggcgggcggctgagatcgtggagcaacttgagaac
acgaccagcgactacgagaaggagaagctcaacgagcgcttggccaaactttcagatggc
gtggccgtgctcaagatcggagggacgagcgatgttgaggtgaacgagaagaaagaccgt
gtgactgacgccttgaatgccacgcgggcagctgtggaggaaggcatcgtgcctggcggc
ggctgtgctcttctgcgctgtattccctccctggacgccatcaaacctgctaatgctgac
cagaagattggtgtggacatcattagacgggcattgcgcatccccgccgtgaccattgcc
aagaacgctggcgtggagggctcgctggtggtggagaagatcctgcaaggacctgccgag
atgggctacgacgccatgttgggcgaatacgtcaacatggtggagaagggcatcatcgac
cccaccaaagtggttcgcacggctctcctggacgcagcaggcgtggcctcgcttctctcc
acagctgaggcggtcgtcacagagatccccaaggaggacaaggaaatgccggccggcgga
atgggcggcatgggcggaatgggcggtggtatgggtttctaa
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