Syngnathoides biaculeatus (alligator pipefish): 133511874
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Entry
133511874 CDS
T09681
Symbol
itga4
Name
(RefSeq) integrin alpha-4 isoform X1
KO
K06483
integrin alpha 4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
sbia04514
Cell adhesion molecules
sbia04672
Intestinal immune network for IgA production
sbia04810
Regulation of actin cytoskeleton
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133511874 (itga4)
04514 Cell adhesion molecules
133511874 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133511874 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133511874 (itga4)
04810 Regulation of actin cytoskeleton
133511874 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
133511874 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133511874 (itga4)
04515 Cell adhesion molecules [BR:
sbia04515
]
133511874 (itga4)
04090 CD molecules [BR:
sbia04090
]
133511874 (itga4)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133511874 (itga4)
Exosomal proteins of other cancer cells
133511874 (itga4)
Cell adhesion molecules [BR:
sbia04515
]
Integrins
Integrin alpha subunits
133511874 (itga4)
CD molecules [BR:
sbia04090
]
Proteins
133511874 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP_3
DUF11
GNVR
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
133511874
NCBI-ProteinID:
XP_061696896
LinkDB
All DBs
Position
14:complement(14598118..14621431)
Genome browser
AA seq
1044 aa
AA seq
DB search
MLTTQQNLDQNQRQNHDLNCSTEMTRPSAVGPDLLPLLVRVLSLVLVSGYTLDVDHALQF
TGVPASMFGYSVLLHRHGAHSWLVVGAPVDNTSSSSSSLSAGGIYRCAITKDERKCQLMP
ADVSHCGKTCKAESDHQWLGVSLSRQPGKHHGGAEGHILACAHRWKNVFYSWNDGQNNKL
PHGVCYRYDNNLTHAQAIIPCYRDHQRKFGEEYGSCQAGMSNQLTQDLIIMGAPGTSYWT
GSVLVFNTSSSVMSVYLDDDGSVGFGSYLGYSVDAGHFLDATSMEVVGGAPQYNQRGKVF
IFSVDGNMLRVQAEVSGTELGSYFGSSIRTVDLNGDGLSDLLVGAPMATGASREEGRVHV
YLNQGQAKLVETEFQLSGGNAHAARFGETISDLGDLDDDGYPEVAVGAPQEDDLKGAVYI
YNGRKHGITQTPSQRISGAVLGRDLLMFGQSLSSGVDVDDNGYQDVAVGAFLSDAAIVLR
SRPVLRVAVLLTLPEKIQQQAASINVSVCFRVTSRQYKGVIDLQYNLTSDLLHQPSFPHR
FYFHGNGSSNSTKARVKMRLGQLSCTNHVAYQRKDVRDIFTPVRFEVSYSLRETNAHKHA
GKHFPPLRPVLQRAAGSRNTVSNETLFARSCFLPNCSTDLQLSATLILPQNGQYLALGAG
PSLMLNTSLLVAGDDAFLPRLTLRFHQNIHYIKVLNNEDKVVSCDVTQEVNGTAVEVSCG
FSQLILASHSLVNISFLLDVNQNATPGDLIIHANTNSNNLESSEYLHDNAVALLLPLKYG
VDVHIHGFVTPTSFMFGDEDTTQVQCYSQTLNYTYKVLNSGPSRSVDTVVEITLPKLLTP
FPHRLLQVVDWQSSQGACVIRNNTAPVIDDCDVPRASFIKQMVFFFSSTSTRTMFCGRGD
QLCERLLCHLGNVEAGRDATIQLEVRLNPDVLLQAPGRHSVVKLESGVVMSSPKNDHHTI
LDRGQPTAQVLAEAHFTQKPSTPIKVFIIVVSLVLGLMILAALIWCLWKAGFFKRDLQKK
KAEEEFNRDSWDYVPKRNNRESTS
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaacacaacagaacctggaccagaaccagcgccagaaccacgatctgaattgt
tccactgagatgacgcgcccctcagccgtcgggccggacctactaccactcctggttcgg
gttctgagcctggtcctggtttctgggtacacgttggacgtggatcacgcgctgcagttc
accggcgttcccgcgtccatgttcggatactccgtgctgctgcaccgacacggggcgcac
agctggttggtggtgggagctccagtggacaacacttcttcttcttcttcttcattgtca
gctggcgggatttaccgttgcgccatcacaaaagatgagcgaaagtgtcagctgatgccg
gcggatgtgtcgcattgtgggaagacatgcaaggctgagagcgaccaccagtggttgggg
gtcagtctgtcccgacaacccgggaagcaccacggaggcgcagagggacacatcctggca
tgtgcacaccgctggaagaatgtgttctactcttggaatgatggtcagaataacaaactg
ccccacggagtttgttatcgatatgacaacaacctcacacacgcacaggccatcataccc
tgctacagagaccaccagaggaagtttggtgaggagtacggctcctgtcaggctggaatg
tcaaaccaactcactcaggacctgatcatcatgggtgctcccgggacatcgtactggacc
ggttccgtcctggtcttcaacacatccagcagtgtgatgtccgtctacctggacgacgac
gggtcggtaggctttggaagctacctgggctactcagtggatgcaggtcatttcctggat
gctactagcatggaggtggtgggaggtgccccacagtacaaccagaggggaaaagtgttt
atcttctcggtggatggcaatatgctacgtgtgcaagcggaagtgtcagggacagagctg
ggctcatactttggctctagcatccgcacagtagacctgaacggtgatggtttatcagat
ctcttagtgggtgctccaatggcaacaggcgcaagtagagaggaaggccgtgtccacgtc
tacctcaatcagggacaggctaagctagtggagacggagtttcagctgagtgggggcaat
gcccatgccgcacgttttggggagaccatctcagacttgggagacctggatgacgacggc
taccctgaggtggcagtgggtgccccacaggaagacgatctaaaaggggccgtttacatc
tacaacggcaggaaacatggcatcactcaaacgccatcacagaggatcagtggggcggtg
ctgggtcgtgacctcttgatgttcggccagtcactgagctcgggtgtggatgttgacgac
aatggttaccaagacgttgccgtgggtgcgttcctctcggatgctgccattgttctcagg
tctcgtcctgttctgcgggtggcggtcttgctcaccctgcccgagaagatacagcagcag
gcggcgagcatcaacgtcagtgtctgcttcagagtcacctccagacagtacaaaggagtt
atagatcttcagtacaacctgacatccgacctcctccaccagccatccttcccacatcgc
ttctatttccacggcaacggctcatccaatagcacgaaagctcgggtgaagatgcggctc
ggccaactcagctgcaccaatcacgtcgcgtaccagaggaaggacgttcgggacattttc
acgccggtccgttttgaagtatcctacagcctacgagagacaaacgctcacaaacacgct
ggcaaacacttcccaccactgaggcctgtcctgcagagggcggctgggagccgcaatact
gtcagcaacgagacgctgttcgctcgctcgtgctttctgcccaactgttctacagacctg
caactcagtgccacgctcatacttccgcagaacggtcagtacttggcactgggcgctggt
cccagcctgatgttgaacacgtctctgttggtggctggagacgatgccttcctgccacgt
ctgacgcttcgtttccaccaaaacatccactatatcaaagtactcaacaatgaggacaag
gttgtgagttgcgatgtcacacaggaagtgaacggcacagcggtcgaagtgagctgcggc
ttttcccaactcatcctggcatctcactccctggtgaacattagcttcctgttggatgtc
aaccagaacgccacacctggtgacctcatcattcacgctaacacgaacagtaacaacctg
gaaagctccgaatatctccacgacaacgccgtcgccttgttacttcctctcaaatatggc
gtcgacgtccacatccatggttttgtgacaccgacttcatttatgtttggagatgaagac
acgacacaggtccaatgttattcacaaaccttgaactacacctacaaggtgttgaattca
ggtcctagcaggtcagtggatacggtggtggaaattacattaccgaagctgttgactccg
tttcctcacaggttgctgcaggtcgtggactggcagtcgtcacaaggcgcctgtgtgatc
agaaacaatactgctcccgtcatcgacgactgcgatgtcccacgggcttccttcatcaaa
caaatggtcttcttcttctcctccacctccacgcgcaccatgttctgtgggcgcggtgac
cagctgtgcgagcgtctgctatgccacctgggcaacgtagaggccggtcgagatgccacc
atacagctggaagtccgactaaaccccgacgttctgctgcaagcgcccggtcgccatagt
gtggtgaagctggaaagcggggtggtgatgtcatcgccaaagaacgaccatcacaccatc
ctggaccgagggcaacccaccgcacaggtcctggcggaagctcacttcacccaaaaacct
tccacgccaatcaaagtgttcatcatcgtggtcagtttggttctgggtctgatgatcctg
gcggcactcatctggtgcttgtggaaggcgggtttcttcaagagggacttgcagaagaag
aaagcggaagaggagtttaaccgtgacagctgggactacgtacccaagcgtaacaacagg
gagagcacatcctaa
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