Syngnathoides biaculeatus (alligator pipefish): 133511888
Help
Entry
133511888 CDS
T09681
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sbia03037
]
133511888
Cilium and associated proteins [BR:
sbia03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
133511888
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_14
TPR_16
TPR_19
TPR_7
TPR_6
TPR_8
CFAP70_TPR_C
ANAPC3
TPR_9
RMD1-3
ARM_TT21_5th
TPR_CcmH_CycH
TPR_MalT
ARM_TT21_4th
DUF6340
ARM_TT21_C
SHPRH_helical-1st
TTC22_N
NatA_aux_su
CFAP70_mid_TPR
BTAD
TPR-S
RNPP_C
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
133511888
NCBI-ProteinID:
XP_061696933
LinkDB
All DBs
Position
14:complement(18939927..18953500)
Genome browser
AA seq
904 aa
AA seq
DB search
MHIFFTFIYLLCNLRVCVDVRISCVSVRCSCRVYSHISCVYVFVPVCVCTLCMCAHHFCH
VFVCVCMHIFYFIFEYLSINCDFWICVCVCVCVCVRMHACIFFLLLCMYCVIFFVCVCVC
LSLSLSLSLVCGLLHIHGHVNKIMTTYFCCQSRTPMPSSVSRPITGAVQQSGAARPISAI
SAAGYSSSTTRCPTYDPLGQSRGPAPPLEEKKDDTPEEKIKLLEKKVNDLITESCLAQSM
GNSQLALEKAKEAERMERALERQREQSRKAEHINVHLTYAVLLNLANQYENNEMYPEALS
SYQLIVKNKMTNAGRLKVNMANIWVKQKNYPKAIKLYRMALDHISDDYKEMRIKIMQNIG
TVFVLLGQYSEAIASFEHIMRKSPNIRTGYNLVLCYYATRDADGMKNAFHKLLAVPLDVQ
NEDKYIAANDDIKSNMLMEVIKNDKLHQMERDLKARAERYVMTSAKLIAPAIEASFAAGF
DWCVDLVKNSPYVELANDLQLKKAMTFFRQMHFDQAMKILKEVAKQDSRVKSAAANNLAS
LFILEKDYEQAERYADLAVNADRYNPGAFVCKGNTEFVKRDYVKAAEFFKEALRNDSSCT
EALRNLGLTYKKLNRLEDALGCFLKLHSILRDSAEVMYQLADIYELMEDPHQAVEWLMQV
ISVVPNDPKALAKLGDLHDLEGDKSQALHYYCESFRLFPCNMEVIEWLAAYYVQTQLYEK
AIHYFDRAILVQPSEVRWQLMVASCYRRSGNSQKALETYKEIHRKFPEDPQCLRFLVRLC
QDMGLKEVHDYASKLKKLEKMKELREQRAKAEQEVSTRSRRTDSAASPTENTSSVPKGER
AAAPVTSLPASGKLYENSGSPKELDASYIDPLGPLADPPRVGAKKQADDDVFAGEDLGDE
LLPE
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgcatattttttttacttttatctatttattgtgtaatttacgtgtgtgtgtagatgtg
cgtatctcttgtgtgtctgtccgttgttcttgtcgtgtgtattcacacatatcttgtgtc
tatgtttttgttcccgtgtgtgtgtgcacattatgtatgtgtgcgcatcatttctgtcat
gtttttgtgtgtgtgtgcatgcatattttttattttatatttgaatacctgtctatcaac
tgtgatttctggatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcatgcatgcatgc
atattttttttacttttatgtatgtattgtgttattttttttgtgtgtgtgtgtgtgtgt
ctctctctctctctctctctctctctcgtgtgtgggttgttacatatccatggacacgtc
aacaaaataatgaccacttatttttgctgccagtctcgtactcccatgccgtcatcggtg
agtcgaccaataacaggcgcagtgcagcagagcggagcagctcgtcccatatctgcaatt
agcgctgcgggttattcctcctcgaccacacgatgcccaacatatgatcctctgggccaa
tccagaggtcccgcacccccactggaagagaagaaagacgacacgccggaggagaagatc
aaactcctggagaagaaggtcaatgacttgatcacagagagctgcttggcgcaaagcatg
ggcaactcacaactggctctagagaaggccaaagaggccgagaggatggagcgagcgcta
gagaggcagagggagcagtcccgaaaggccgagcatatcaacgtacatctcacctacgct
gttctgctcaaccttgctaaccagtatgaaaacaacgagatgtatccggaggctctgagc
agctaccagctcatcgtcaagaacaagatgaccaacgccggacgcctgaaggtgaacatg
gccaacatctgggtgaagcagaagaactaccccaaagccatcaagttgtaccgcatggcg
ctggaccacatctcggacgactacaaggagatgaggatcaagatcatgcagaacatcggc
acggtcttcgtgctgctgggccagtactcggaagccatcgcgtcctttgagcacatcatg
aggaagagccccaacatcaggaccggctacaacctggtcctctgctactatgccacacgg
gacgccgacgggatgaagaacgccttccacaaactcctcgccgtgcccctcgacgtgcag
aacgaagacaagtacatcgccgccaacgatgacatcaaatccaacatgttgatggaggtc
atcaaaaacgacaaacttcaccaaatggagcgagacttgaaagcccgagccgagaggtac
gttatgacctccgccaagctcatcgctccggccatcgaggcttctttcgccgccggattt
gactggtgtgtggacttggtgaagaactcgccgtatgtggagctggccaatgacctgcaa
ttaaaaaaggccatgaccttcttcagacagatgcacttcgaccaggccatgaaaatcctg
aaggaggtcgccaagcaggacagcagagttaaaagcgccgcggccaacaaccttgccagt
ctcttcatcctggagaaagactacgagcaagcggagcgctacgccgacctggccgtgaac
gcggaccgctacaacccgggagcctttgtgtgcaaaggcaacacggagtttgttaagcgc
gattacgtcaaggcggccgagttcttcaaggaggcgctgaggaacgactcctcctgcacc
gaagccctcaggaacctgggtctgacgtacaagaaactgaatcgtctggaggacgcgttg
ggctgcttcctgaagctgcacagcatcctcagggacagcgccgaggtcatgtatcaactg
gcagacatctacgaactcatggaggaccctcatcaggcggttgagtggctgatgcaggtc
atcagcgtggtccccaacgaccccaaagctctggccaagctgggagatctgcacgacttg
gagggggacaagtcgcaggctttgcattactactgcgagtctttcaggctgttcccctgc
aacatggaggtgatcgagtggttggccgcctactacgtgcagacgcagctctacgagaag
gccattcactactttgacagggccatacttgtgcaaccgagtgaggtgaggtggcagctg
atggtggccagctgttacaggagaagcggaaacagtcagaaggctctggaaacctacaaa
gaaatccaccgcaagttcccagaagatccgcaatgtcttcgcttcctggtgcggctgtgc
caggacatgggcctcaaggaagtccacgactacgccagcaaactcaagaagctggagaag
atgaaggagcttcgggaacaaagagccaaagctgagcaggaagtaagtacaagaagccga
aggaccgacagtgcagcctctcctactgagaacacatcaagtgttcccaaaggcgagcgt
gcggccgcccctgtgacgtcacttcccgcttccggcaagctttatgagaacagcggcagc
cccaaagaacttgacgcgtcttacattgacccgctggggcccctcgccgacccgccccgg
gtgggcgccaagaagcaggcggacgacgacgtctttgccggagaggacctcggagacgag
ctgctgcccgagtag
DBGET
integrated database retrieval system
