Syngnathoides biaculeatus (alligator pipefish): 133511890
Help
Entry
133511890 CDS
T09681
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sbia03037
]
133511890 (ift88)
Cilium and associated proteins [BR:
sbia03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
133511890 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_14
TPR_19
TPR_16
TPR_8
TPR_7
TPR_6
TPR_11
ANAPC3
TPR_9
TPR_10
ARM_TT21_5th
ARM_TT21_4th
ARM_TT21_C
TPR_MalT
TPR_15
TPR_CcmH_CycH
TPR_EMC2
TPR-S
SHPRH_helical-1st
NatA_aux_su
HAT_PRP39_C
Glyco_hydro38C2
Cpf1_PI-like
Motif
Other DBs
NCBI-GeneID:
133511890
NCBI-ProteinID:
XP_061696940
LinkDB
All DBs
Position
14:complement(18956201..18972741)
Genome browser
AA seq
815 aa
AA seq
DB search
MENVHLAVEEDDIYSGYNDYNPTFDTEELDNDAGFQEAVRTSHGRRPPMTAKFPGTAASG
RPFASSFGARLATTGRPVTGAVLDGASRPMSAVRAAGFTSSRTRGSSFDPLGQSRGPAPA
LEEKKEDLPEEKIKLLEKKVNDLITESCMAQSLGNSQLALEKAKEAERKERMLVRQREQY
GNAEQINIDLTYAVLLNLANQYENNEMYPEALSSYQLIVKNKMFTNAGRLKVNMANIWVK
QKNFPKAIKLYRMALDHISDDYKEMRIKIMQNIGTVFVLLGQYSDAIASFEHIMSKSPNI
RTGYNLVLCYYAVRDADGMKNAFHKLLAVPLDMQNEDKYIAANDDIRSNMLIEAIKNDKL
HQMERDLKARAEKYVMTAAKLIAPAIESSFASGFDWCVDMVKSSQFVELANDLEINKAIT
YLRQKDFNQAVTILKTFEKKESRVKSAASTNLSALFFLEKDYEQAERYADLAMIADRYNP
GALVNKGNTEFVKEDYAKAVEFFKEALRNDSSCTEALRNLGLTYKKLNRLEDALDCFLKL
HAILRDSAEVMYQLADTYELMEDPHQAVEWLMQVISVVPNDPKALAKLGDLHDLEGDKSQ
ALHYYCESFRLFPCNMEVIEWLAAYYVQTQLYEKAIHYFDRAILVQPTEVRWQLMVASCY
RRSGNYQKAWDTYKEIHRKFPENVECLRFLVRLSQDMGLQEVQDYTSKLKKVEKMKELRE
QRVRSAREGSARGRREGSAGSADSSNGNKGERLGVQVMSLPAFSEPYESSSPKELDASYV
DPLGPLTERPKTGAKARVDDDDFADEDLGDELLPE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgtacatcttgcggtagaggaagacgatatttactcgggatacaacgactac
aacccgacgtttgacaccgaggagctggataatgatgcgggattccaagaggcagtcagg
accagccatggaagaagacctccgatgactgcaaaatttcccggaactgccgcatcgggg
cgcccttttgcttcatcctttggagctcggctggccacgaccggtcgacccgtgactgga
gctgtgttggatggagcatctcggcccatgtcggcggtcagagcggcaggtttcacctct
tcgcgaacacgtggctcatcttttgaccctctgggacagtccagaggccctgccccagca
ctggaggaaaagaaagaggatttgcctgaagagaagatcaaactcttggagaagaaagtg
aatgacttaatcactgagagctgcatggcacaaagcttgggcaactcgcaactggctctt
gagaaggcgaaagaggctgagaggaaggagagaatgttagtgagacagagagagcagtac
ggcaatgcagaacaaatcaacatagatctcacctacgctgttctgctcaacctggctaat
cagtatgaaaacaatgagatgtacccagaggccctgagcagctaccaactcatcgtcaag
aacaagatgttcaccaatgcaggacgtctgaaggtgaacatggccaacatctgggtgaag
cagaagaacttccccaaagccatcaagttgtaccgcatggcgctggaccacatctctgac
gactacaaggagatgaggatcaagatcatgcagaacatcggcacggtcttcgtgctgctg
ggccagtactcggatgccatcgcgtcctttgagcacatcatgagcaagagccccaacatc
aggaccggctacaacctggtcctctgctactatgccgtccgggacgccgacgggatgaag
aacgccttccacaaactcctcgccgtgccgctcgacatgcagaacgaagacaagtacatc
gccgccaacgacgacatcagatccaacatgctgattgaggccatcaagaatgacaagctg
caccaaatggagcgagacttgaaagctcgtgctgaaaagtacgtgatgacggccgccaag
ctcatcgccccggccatcgagtcttcttttgcctccggatttgactggtgcgtggatatg
gtcaagagctctcagttcgtggagctggccaatgacttggagataaacaaagccatcacc
tacctcagacaaaaggacttcaaccaggcagtgaccatattgaaaacctttgagaagaag
gaaagcagagtcaaaagtgccgcctccaccaacctctccgccctcttcttcctggagaag
gactacgagcaggccgagcgatatgccgacctggccatgattgctgaccgctacaacccg
ggcgctctggtcaacaaaggcaacacggagttcgttaaggaggactacgccaaggcagtc
gagttcttcaaggaagcactgagaaacgactcctcttgcaccgaagccctcaggaacctg
ggtctaacatacaagaagctgaatcgtctggaggacgcactggactgcttcttgaagctc
cacgccatcctgagggacagcgccgaggtcatgtaccagctggcagacacctacgaactc
atggaggaccctcatcaggcggtggagtggctgatgcaggtcatcagcgtggtccccaat
gaccccaaagctctggccaagctgggagatctgcacgacttggagggggacaagtcgcag
gctttgcattactactgcgagtcctttaggctctttccctgcaacatggaggtgatcgag
tggttggccgcctactacgtgcagacgcagctctacgagaaggccattcactactttgac
agggccatacttgtgcaaccgactgaggtgaggtggcaactcatggtcgccagctgttat
aggagaagtggaaactaccagaaagcttgggacacatacaaagaaatccaccgcaagttc
cctgaaaatgtggaatgtctccgcttcctggtgaggctgagccaggacatgggcctgcag
gaggtccaggactacacgagcaagctgaagaaagtggagaagatgaaggagctcagagaa
cagagggtgaggtcggcacgagagggcagtgcccgaggtcgaagagagggcagcgcaggg
agtgctgacagcagcaacggcaacaaaggcgagcgtctgggcgtccaagtgatgtcactt
cctgctttcagtgaaccgtacgaaagcagcagtccaaaagaactcgacgcctcctacgtg
gacccgctcgggcccctgacggagcgccccaagacgggggccaaggcgcgggtggacgat
gacgactttgcggacgaagacctcggagatgagctgctgcccgagtag
DBGET
integrated database retrieval system
