Syngnathoides biaculeatus (alligator pipefish): 133511939
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Entry
133511939 CDS
T09681
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04145
Phagosome
sbia04814
Motor proteins
sbia05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133511939
09142 Cell motility
04814 Motor proteins
133511939
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133511939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133511939
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133511939
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
133511939
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
133511939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML
WDR55
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IP5PC_F
RAB3GAP2_N
ComX
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
133511939
NCBI-ProteinID:
XP_061697039
LinkDB
All DBs
Position
14:complement(12029724..12057988)
Genome browser
AA seq
628 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKRKEAEQLKDTAIHHEESDLEKKRCEAD
ALLQSFGIASDVPVGPPPTSPTAKSADSETGSQDSDGAVGPRTLHWDSDPSTLQLHSDSQ
LGRGTSKLGMAKVTQVDFPPRETVSYTKETQTPVMTQQKEDEEEEEDEGEAAPPQPVVET
LTEKPDLKEEEEVSLHELTEEEKLQILHSEEFVNFFDHSTRIIERALSEHVDLFFDYSGR
DLEEKEGEIQGGAKLSLNRHFTDERWSKHRVVTCLDWSPQYPELLVASYNNNMDAPHEPD
GVALVWNMKYKKTTPEYVFHCQSAVMSAAFAKFHPNVVVGGTYSGQIVLWDNRSNKRTPV
QRTPLSAAAHTHPVYCVNVVGTQNANNLISISTDGKMCSWSLDMLSQPQDSMELVFKQSK
AVAVTSMSFPLGDVNNFVVGSEDGSVYMSCRHGSKAGISEMFEGHHGPITGIHCHTAAGP
LDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLD
LWNLNNDTEVPTASVTVDGNPALNRIRWAPSGREIAVGDSEGRVLVYDIGEQIAAPRNDE
WSRFVRTLADINENRDDAEELAAQRLTA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgaactgaaagcagagctggaaaggaagaagcaacgcttggcccaa
atcagagaagaaaagaaaaggaaagaggaggaacgcaagaggaaggaggcagaacaactg
aaagataccgccattcaccatgaagagtctgacttggagaagaagcggtgtgaagctgat
gccctgctacaaagctttggaatagcttcagatgttcctgttggtcctcctcctacgtct
ccaactgccaaatcagcagacagtgagacagggagccaggactcggatggagctgttggg
ccgaggactctgcactgggactctgacccgtccactcttcagcttcactctgattctcag
ctggggcgggggacttcgaaactgggaatggccaaagtcacacaggtggacttccctcca
cgtgagactgtgtcttatacaaaagaaactcagacacctgtaatgacacagcaaaaagaa
gatgaggaagaagaagaagatgaaggagaagctgctccaccacaacctgtagtcgagact
ctgactgagaagccggacctcaaagaggaagaagaagtgagcctccacgagctgaccgag
gaagagaaacttcagattttgcactcggaggagtttgtgaattttttcgaccacagtact
cgcatcatcgagcgggctttgtcggagcacgtggacctcttttttgactacagtggccgt
gacctggaggagaaggaaggcgaaatccagggcggggcaaaactttcactgaacagacat
tttacggatgaacgctggtccaagcaccgtgttgtcacttgcctggattggtcaccacag
tatcctgaacttctggttgcttcctacaacaacaacatggacgctcctcacgagccagat
ggcgtggccttggtgtggaacatgaagtacaagaagaccacaccagaatatgtctttcac
tgtcagtctgctgtaatgtccgctgcctttgcgaagttccacccgaatgtggtggtcggg
ggcacatactcaggccagattgttttgtgggacaacaggagcaacaagaggactccagtg
cagagaacacccctgtctgctgccgcacatacgcacccggtttactgtgtcaacgtggtt
ggcacccagaacgccaacaacctgatcagcatctccactgatggcaagatgtgctcctgg
agtctggacatgctctctcagccgcaagacagcatggagctggttttcaagcagtccaaa
gctgtagccgtcacctccatgtctttcccactgggagacgtaaacaatttcgtggtgggc
agtgaggacggctccgtctacatgtcgtgtcgtcacggaagcaaagcaggcatcagcgaa
atgttcgagggccaccacgggcccatcacaggcatccactgccacacagccgctgggccg
ctggacttttcccatctctttgtgacatcctcttttgactggacagtcaaactgtggagc
accaagaacaacaagccgctctattcgtttgaggacaactctgactatgtgtatgacgtc
atgtggtctccgactcacccggctctgttcgcttgtgtggacggtgtgggccacctggac
ctgtggaacctcaacaatgacacagaggtcccaacagccagcgtgaccgtggatgggaac
ccggctctcaacaggatccgatgggctccttccggaagagaaatcgccgtgggagactca
gagggacgagtgctggtgtatgacattggggagcaaatcgctgccccgcggaacgacgag
tggagccgtttcgtccgtactttggctgacatcaacgagaacagagacgacgccgaggag
ctggcggctcagcgtttgacagcgtga
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