Syngnathoides biaculeatus (alligator pipefish): 133511947
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Entry
133511947 CDS
T09681
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133511947 (stxbp5l)
Membrane trafficking [BR:
sbia04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133511947 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
133511947 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Lgl_C
Synaptobrevin
Beta-prop_EML
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
133511947
NCBI-ProteinID:
XP_061697053
LinkDB
All DBs
Position
14:19956665..20081596
Genome browser
AA seq
1288 aa
AA seq
DB search
MKKFRKVLDGLTTSSPGGGTIGSPSCGSAAGTPTAAAPTPKEIDVQETLVSENFQLCKTV
RHGFPYQPTALAFDPVQKILAIGSRSGGVRILGRPGVDCFCQHESGAAVLQLQFLINEGA
LVTACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIE
SFILSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLVGFESGTIVQWDLRAKKADF
RIYYDEAIHSVSWHHEGKQFMCSHSDGSLTLWNLRNTSKPIQVTFPHGKIQKDGRKESCK
PILKVDYKTSRNSEPFIIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYAIVEFMTLCET
PYNNEVQDPYAVVVLLEKDLIVVDLTQSKSGEITRNPPRDETNYERNKDRTKEAHSDIHV
CSVCDFRSFPVFENPYPMDIHESPVTCTAYFADCPPDIIPVLYSIGAKHKKTGFSQKEWP
VSGGMWTLGSHTYPEIIITGHADGSIKFWDASAITLQMLYKLKTSKVFEKPKPSEGRAAE
LADDDPFAVQMVNWCPQSRIFCVVGISAHIILYRFSKYDANTQIVSLEVRLQCDPEDVIS
PSENENNPCFSEPHSGSHSPQAHHQHPVSPAGGTPESFKDSTPCLKVKDRVVRVPPGYQA
ELVIQLPWIDGEPPQQISSLDINSAYGLLAFGNCNGLAVVDYLQKTVLLCMSTLDLYGAA
DPYQRLTRSPRRNRQSTSGLTELSDNQQSVDMERSKSPTSVHYPTSLHNDPRVLPEPVAS
LRASHCSPVFYLLDNVKGPGRKLSLPTDLKTNLDHVNGHCTSPTSQPCSAGKPRVPMGPE
GPRLARRGPGRPPFRKAQSAACMEISLPVSHTEGYASRRAMLQQLHGVTMYSHDEHHTAT
PYCWSDRESRENSFSRSRSSSVSSIDRETKEAITVLQFGESFGRKSDTLPTPCLWVGTSL
GVIILIPMSIPTDQEERMEEPVTIGPCGAVLMLKGSVLRFGFLDCTGAHIQSPYEVWRDL
NAPEDPDRPRKRKLVHYSPSSSQDTCGEGHLAIVCSERQAKVFLMPSQSCLFVHNITESS
FVLRADVVSVCNSVCLACFCANGHVMTLSLPSLRPLMDVNYLPLTDMRIARTFCFTNGGQ
ALYLSSPTEIQRITYSQEMYDNLQEMLGELFTPTETPEAQNRGFLKGFFGGNAHTFDREE
LFGEAAAGKASRSLAQHIPGQGGVEGMKVAASGAVGELARARIALDERGQRLGELEERTA
LMMTSAESFSKHAHELMLKCKDKKWYQF
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttccggaaggtgctggacggcttgaccacctcgtccccgggcggcgggact
attggatcgccgtcgtgcgggagcgccgccgggacccccaccgccgcggcgccgaccccc
aaagagatcgacgtgcaagagacgctcgtgtcggaaaactttcagctgtgtaagacggtg
cgccacgggttcccctaccagcccacggctttggccttcgaccccgtgcagaagatcctg
gccatcggctccagatcaggtggtgttcggatactgggacgacccggggttgactgcttt
tgtcagcacgagagcggcgcagcggttcttcaacttcagtttctgatcaatgagggcgcg
ttagtcacggcctgcgcagatgacacgttgcacttgtggaatcttcgtcagaggcggcca
gcgatcctgcattcgctcaagttcaacagagaaaggatcacattttgccaccttcccttt
cagagcaaatggctctatgtcgggacggagcgcggcaacacgcacatcgtcaacatcgag
tccttcattttgtccggatatgtcatcatgtggaacaaagccatcgaactctcaactaaa
actcatccaggacccgtagttcacttgagtgacagcccgaaggatgaaggcaagcttctg
gtcgggttcgagagcggtacaatagtacagtgggacctcagggccaaaaaggcggatttc
cgaatctactacgatgaggccatccactcagtcagctggcatcatgaaggcaaacagttt
atgtgcagccactcagacggcagcctgaccctgtggaaccttagaaacacctccaagcct
atccaggtcactttcccgcatggtaaaatacagaaagatgggaggaaggaatcatgtaaa
ccgatattgaaagtggactataagacctcaaggaacagtgagccttttatcatcttctct
ggaggtctctcgtacgacaaggcaggacggcggcccacgttaaccatcatgcacggcaag
gccattacggtgctggagatggactacgctattgtcgagttcatgactctttgtgagact
ccttacaataacgaagtccaggatccttatgcggtggtggtgcttttagaaaaggattta
atagtggtggacctgacgcagagcaagagcggcgagattacccggaaccctccgagggac
gagactaattacgagagaaataaagacagaacaaaggaggcccattcagacattcacgtc
tgttctgtttgcgatttccgcagcttccccgtctttgagaacccttaccccatggacatc
cacgagtctccagttacatgcacggcttattttgccgactgccctccagacatcatccct
gtcctctactccataggagctaaacacaagaagaccggcttcagtcaaaaggagtggcca
gttagtgggggaatgtggacgttgggctcgcacacctacccggagatcatcatcactgga
catgcagatggctcgatcaagttttgggacgcatctgcaattacactgcagatgttgtac
aagttgaagacttccaaagtgtttgaaaagccaaaacccagcgaggggcgcgcagcggag
ctggcggatgacgacccctttgcggtgcaaatggtcaactggtgcccccaaagtcggatc
ttttgcgtcgtggggatctcggcccacatcatcctgtaccgcttcagcaaatatgatgcc
aacacccagattgtgtctctagaggtgcgactgcaatgcgatccggaggatgtcatctcg
ccatctgaaaatgaaaacaatccctgcttctcagagcctcactcgggctcccactcccct
caggcccatcaccaacacccagtgagccccgccggcggaacaccggagtctttcaaagac
agcaccccctgccttaaagtaaaggatcgggtggtgcgggtaccgcctggctaccaagca
gagctcgtgatccagctgccttggatcgatggagaacctccacagcagatttcaagcctg
gacatcaactccgcctatggccttttggcgttcgggaactgtaacggccttgcggtggtc
gactacttgcagaaaactgtcctgttgtgcatgtccactctggatttgtacggagccgcc
gatccctatcaacgccttacccgctccccccgtaggaaccgacagtccacctcaggcctt
actgaactatctgacaaccagcagtctgttgacatggagagaagcaagtcgcccacctca
gttcattacccaacctcccttcacaatgacccacgtgtcctgccagagcccgtggccagt
ctgagagccagccactgcagcccagtcttttacttattggacaatgtaaagggacccggc
agaaagttaagtctgccaacagatcttaagaccaatcttgatcatgtgaatggacattgc
actagtcccacctcccagccctgctcggcggggaagcctcgcgtcccgatgggtcccgag
gggccacggcttgcccgcagaggccctggccgaccgccgttccgcaaggcccagtctgct
gcttgcatggagatctctttgcctgtgtcccacacggaaggttatgcatccaggagggca
atgctccagcagttacacggagtcacaatgtactctcacgacgagcaccacaccgccacc
ccctactgctggagtgacagagagagccgcgaaaactccttcagtcgctcgcgcagctcc
agtgtctccagcattgaccgagagaccaaagaggcaatcaccgtgctgcagtttggggaa
tccttcgggagaaagagcgacactttgcccacaccatgtctttgggttggtaccagcctt
ggtgttatcatactcattccaatgtccatccccactgaccaggaggaaaggatggaggag
ccggtcactattggtccctgtggggcagttctgatgctaaagggctccgtgttgcgcttt
ggcttcttggactgcacgggcgcgcacattcaaagcccctacgaggtttggcgcgatctc
aacgcccctgaagaccccgaccggccacgaaagcgcaagctggtgcactactcgccctcg
tcctcccaggacacctgcggagagggacatctggccatcgtgtgctctgagaggcaggcc
aaagtgttcttgatgccctcgcagtcttgcctcttcgtccacaacatcacggagtcgtcc
ttcgtcctgcgggccgacgtggtgtccgtgtgtaacagtgtgtgcctcgcctgcttctgt
gccaacgggcacgtcatgacgctcagtttgccaagtctaagaccgctgatggatgttaat
tacctgcctctgacagacatgcgcattgccagaaccttttgcttcaccaatgggggacag
gcgctctatctcagctccccgacagagatccagagaattacatacagccaggaaatgtat
gacaatctgcaggaaatgcttggagagctgtttacgccaacagaaacaccagaggcccag
aacagaggcttcttaaagggcttcttcgggggaaacgctcacacattcgaccgagaggag
ctttttggggaggcagcggcgggtaaggcctcccggagtctcgcccaacacattcccggt
caggggggcgtggagggcatgaaggtggcggctagcggggcggtgggcgagctggccagg
gcccgcatcgctctggacgagagaggccagagacttggcgagctggaggagagaactgcg
ctgatgatgaccagtgcagaaagtttctccaagcatgctcacgagctcatgttaaagtgc
aaggacaagaagtggtaccagttctaa
DBGET
integrated database retrieval system
