Syngnathoides biaculeatus (alligator pipefish): 133511982
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Entry
133511982 CDS
T09681
Symbol
abca12
Name
(RefSeq) glucosylceramide transporter ABCA12
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133511982 (abca12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbia02000
]
133511982 (abca12)
Transporters [BR:
sbia02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
133511982 (abca12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_30
DUF4162
MukB
Mg_chelatase
AAA_15
Motif
Other DBs
NCBI-GeneID:
133511982
NCBI-ProteinID:
XP_061697128
LinkDB
All DBs
Position
14:9519816..9563944
Genome browser
AA seq
2196 aa
AA seq
DB search
MSSLGLLSGAVDMLPDSFPFSALLKNMTRALANESQENLLHLQQIIQTAAQLFQTNLSDP
FFTQQLDQLKSQICVAEGTEFAGHLLGAFSMEPGQLCDVIIPALQILLQAAQVNTTGLSD
ALFQALVGDPSTYANDTHWSSMLTQSLGFDTSSLSSLNINITTQGEVTVGEMLRNKSAFV
QDVQKYMDFDPVALQMLMETIMPKNNLQILSWLMNLRHCNSPEHLSIIEPDVLLFRTFCS
LSGQGWYTFSLLMARHLNVEKFLFRMVLSDEVQSLLGFMLQMANNIINMMDDILPAIGQL
QGYMISVRELNLMAENEFNLVSRRMKSGLSTRATFVTMTRAMCSYGVMPFFGLAKLPHKS
ESNPSLLNSSQRDEIIERFKIPRNATPYCMNMYLDMVNTTGGAIAWAFLKPLLMGNILFT
PDTPITRAIMAKANTTLQEFSNLRRHSNEWLKSSNYIMKSAEVLNHTLPMLQKSLANGFV
KTFIEMETDINVDKMKATLNNFSNMTLMLERNKHIMEQITTLSTLMVNISSCIKFDRYQG
YQSAEELDTEAQELAKDRSLYGSVIFKLPKEENSSSLPPKVSYTIRMHLDNVMRTDRVRS
PYFVKDTHISQRKTMRYNRAFVYLQENIDRALIEMQTGRVTDTAVQIQPFPYPCYLRDRY
MEAITLVFPLMLMLAWVLFVADFVKKLVHERELGLHEYMKMMGVNPFSHFLAWFLEGAAH
LMVTIIILTLILKHGGILSHSDGFLLFLYFCDYGLTILAFSYLMSSFFDKTYIAGLSASL
LYIICFFPYIVVMAVETSLSFFQKSALSLFSPCCFSYATQYISLYEARGEGIQWSNSYSS
PQAGDTSSFGWLCWMMLYDSLIYFTAGAYIRMVFPGKYGIPAPWYFPFTASFWADLFCCI
KSQKGGKGLMFTNTMNLTLPVFSNDKGKGQSQLFSQTGEDFSHLPVGVTLHSLTKVYGDR
MAIQNLNISFYEGHVTSLLGHNGAGKTTTMSLLTGLFAPSSGTVQVYGRDMHTNLDDVRK
DLGVCMQYDVLFDHMTTKEHLLLYGQIKAPHWSQKELHEQVRTILEETGMYIHRHKRVGT
LSGGMKRKLSISIAFIGGSRLVVLDEPTTGVDPCSRRSIWDIIIQNKKRHTIIMSTHHLD
EAETLSDRIAFLERGGLKCCGSPFYLKDKLGQGYKLTLTKKAHVLESDGFDDAEIKAFIQ
AHVPEARLKETQGGDLVYSLPPFTSSNASSYSSLLTALDANLDDLQLGGYGISDTTLEEV
FLHLTEENKGSLHEENRPFSISETLSETDSIDTFPADPSDMIPGSDKINLTSSNRAQGMA
LAWQQIKAILIKRFHHSCRDYRGLISQLLLPVLFVAFAMGLGSIKNDVWHYPELELSPAL
YNIRPSYSFFSNHNGRSSQMVDTMMSFPGMDNSCLDQSSNPVCTILTNNLNSGGNRSTSL
SDCKCTLQEQSCHGERFQPASWQIPSSQIVYNLSGINVENYLLTTANTFIRNRYGGFEFG
MPLPRDLEMDLLPKSNNVTLSKVWFNPEGYHTMPAYLNSLNNVILRSKLPGDKDPKKYAI
SVSNHPYFGRPDEDDSITLGLLQILVAICVLTGYSITTASFSVYVVNERHSGSKRLQHIA
GISEPFYWAINFLYDMILYLIPVSLTIGVVAAFQISAFTDQQNLAAISLLLVLFGFATFP
WMYLLSGVFKDGETAFITYVCINLFISINTIISTSIIFFLAESTTPAAKRESIQNIFRIL
SDAFLIFPQFSFGNGLMKLARMNVEVQVLRGYGIDAYKNPFSTEVLGWMFISSIIQGVVF
FGLRLLLNMFLLRKVRHLILGRKKVSEVVEDEDEDVAAERLRVSSGAAGEDILQVNQLTK
IYQHVNKKIYAVKKLSVGIPAGECFGLLGVNGAGKTTTFKMLTGDVSPTDGTAQIRDWDG
RLVDIMECRRKGINIGYCPQVDALDNLLTGEEHLYFYARIQGITKREIDRVVKYLLKKLE
LNHHRNVITDGYSCGTRRKLSTAIALIGHPQILLLDEPSSGMDPRTKRHLWKIISEEVKG
KSAVVLTSHSMEECEALCSRLAIMVKGQFRCLGSLQHIKNRFGSGFTVKMHLAEPASDVE
PITVFMQKQFPSTYLKDQHSSMAEYHVPFAPGGVADIFQHLEDNRTSLKIKHFSVSQTTL
DEVFINFAMGNFHMESISTHSKGEDDDLGFIKEVQT
NT seq
6591 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcactgggcctcttgagtggtgctgttgatatgctgcctgatagctttccgttc
tctgctctgctgaaaaatatgaccagagcgcttgccaatgaatctcaagagaacttacta
catttgcagcagatcatccagacagctgcacagcttttccagaccaacctgagtgatccg
ttttttacacaacaacttgaccaactgaaatcccagatttgtgtagcagaggggactgag
tttgccggtcacctcttgggagctttctccatggagcctggtcaactctgtgacgttatt
ataccagccctgcaaatattgttgcaggctgcgcaggtcaacaccacaggtctgagtgat
gcccttttccaggcactagttggtgaccccagcacctatgccaatgacacacattggtcc
tctatgctcactcaaagtttgggctttgacaccagcagcctgagttctctcaacatcaac
atcacaactcaaggggaggtaacggtcggcgagatgctgcggaataaaagtgcatttgtc
caggatgttcagaagtacatggatttcgatccggttgctctccagatgctgatggagaca
attatgcccaaaaacaatttacagatcctttcttggttgatgaatctgcgtcattgcaat
tcgccagaacatctgagcatcatagagccggatgtgctcctgttccgaaccttctgttcc
ttgtccggtcaagggtggtacaccttctctctgctcatggctcgccatctcaacgtggaa
aagttcctcttcagaatggtgttgtcagatgaagttcaaagcctactaggatttatgctt
cagatggccaacaatatcatcaacatgatggacgatatccttcctgccattggtcagctg
cagggttacatgatttccgtcagagaactcaacctgatggctgaaaacgagtttaaccta
gtgtcaagaagaatgaagtcggggctctcaacccgggctacttttgtcaccatgactcga
gcaatgtgcagttacggtgtgatgcctttttttggacttgccaaacttccccacaagtca
gagtccaatccatccttgctgaacagcagtcagagggacgagataattgagaggttcaag
attccacgaaatgccaccccttattgtatgaacatgtacctagacatggtcaacacgaca
gggggcgccattgcatgggcctttctcaaaccattgctgatgggaaacatcctcttcaca
cctgacacaccaatcaccagggctattatggcgaaggccaatactaccctgcaagagttc
agcaacctaagaaggcactctaacgaatggctcaagtcctcaaactacatcatgaaatct
gccgaagtgcttaaccacactttgcccatgcttcagaagtccttagcaaatggctttgtg
aagactttcattgagatggagacagacataaatgttgacaaaatgaaggcgacgctcaat
aacttctcaaacatgacattgatgttggagaggaacaaacacataatggagcagatcacc
accttgtccaccctaatggtcaacatctcatcctgtattaaatttgatcggtaccaaggt
taccaatctgctgaagagcttgacactgaagctcaggaactcgccaaggaccgcagtctc
tatggaagtgtcattttcaagctccccaaagaggagaactcctcttccctgccacccaaa
gtcagctacactatccgaatgcatctggacaacgtcatgcggacagaccgtgtccgcagc
ccatactttgtcaaagacacccacatatctcagcggaaaacaatgcggtacaaccgggcc
ttcgtttacctgcaggagaacatcgaccgggcactcattgagatgcaaactggaagagtc
acagacacggctgtgcaaattcagcccttcccatatccatgctatcttcgtgataggtac
atggaggccataaccttggtcttcccgctcatgctgatgttagcttgggttctctttgtg
gctgactttgtaaaaaaattggttcatgaaagagaactggggttgcatgagtatatgaag
atgatgggcgtgaatccttttagccacttcctcgcatggttcttggaaggtgccgctcat
ctgatggtgaccatcatcatcctcacgcttatcctcaagcatggtggcatcctctcgcat
agcgatgggttcctcctgtttttgtacttctgcgactacggtttgaccatcctggccttc
agttacctgatgagctccttcttcgacaagacctacattgctggtcttagcgccagcctg
ctttacattatctgcttcttcccgtatattgtggtcatggcggtggagaccagtctcagc
tttttccagaagagtgcactgagcttattttccccgtgctgtttcagttacgccactcag
tatatctctctctatgaggctcgaggagaaggaattcagtggagcaattcctattcctca
ccccaagctggagacacatcgtcttttggttggctgtgctggatgatgctctatgactca
ttaatctacttcactgctggagcgtacatccgcatggtcttccctggcaaatatggtatc
ccagctccatggtacttccccttcacagcctccttttgggctgaccttttctgctgtata
aagtcacagaagggaggcaaagggcttatgttcaccaacaccatgaatctaaccctgcct
gtgttctctaatgacaaggggaaaggccagagccagcttttctctcagacaggcgaggac
ttctctcatctcccagtgggtgttacccttcacagtctcactaaggtctatggggaccgg
atggccattcagaaccttaacatttctttctacgagggccatgtcacatcactactaggt
cacaatggagctggaaagactactaccatgtcactcctcacaggtctctttgcgccatca
tctggtacggttcaagtgtatggccgagacatgcatacaaatttggatgacgtccgcaaa
gacctgggtgtgtgcatgcaatatgatgttctctttgatcacatgaccaccaaggagcac
ctcctgctctatggccaaataaaggccccacactggtcccagaaggaattgcatgagcag
gttcgaacgatcctggaggagacgggcatgtacattcacagacacaagcgggtgggcaca
ctgtctggcggtatgaagcgcaagttgtcaatctccattgcgttcattggtggctcccgc
ttagtggtgctggatgaacccaccacaggtgttgatccttgttccaggcgaagcatctgg
gacattattatccaaaataaaaaacggcacaccattatcatgtctacccaccacctggat
gaagctgaaacgctgagtgaccggattgccttcctggagcgaggagggttaaaatgctgt
ggctcccctttctatctgaaagataagctgggccagggctacaaactcactctcactaaa
aaggcgcacgttcttgagtctgacggctttgatgatgctgaaattaaggcctttatccaa
gcacatgtaccggaagcacggctaaaagagacccaggggggcgacttggtctactctctg
cccccattcacctcatccaatgcctcctcatacagctctcttctgacagcgctggacgcc
aatctggatgatctacagttgggaggctacggtatctcagatacaaccctagaagaggtg
ttcctccatttgactgaggaaaataaaggaagtcttcatgaggagaacagacctttttct
atctcagagacgctttcagaaactgactccattgacactttccctgcagatccaagtgac
atgatcccaggttctgacaaaattaacctgactagttccaacagagcacaagggatggcc
cttgcttggcagcaaatcaaagctattctcatcaagaggttccatcacagctgcagagac
tacaggggcctgatctcccagctcctacttcctgttttgtttgtggcatttgctatgggc
ctgggatccatcaagaatgatgtgtggcactatcctgagctggagcttagccctgcactc
tacaacatcagaccaagttactctttcttcagtaaccacaatggacgatccagccaaatg
gtggacactatgatgtcattcccaggaatggataacagttgccttgaccagtccagtaat
ccggtttgcacaattctaactaacaacttgaattccggggggaacagatccacatctttg
agtgactgtaaatgtacccttcaggaacagagttgtcatggggaaagatttcagccagcc
agttggcagatcccgtcttctcagatcgtttacaacctaagtggaatcaatgtcgagaat
tacctactgaccacggccaatacctttattagaaacaggtatggtgggtttgaatttgga
atgccgctcccacgtgacttggaaatggatcttctacccaagtctaacaatgtcacttta
tctaaggtttggttcaaccctgagggataccacacaatgccagcatatttaaacagcctc
aacaatgttatcctacgctccaaacttccaggagataaagatccaaagaaatatgctatt
tcagtgtccaatcatccctactttggccggccagatgaagatgactccatcactctggga
ttgctccagatccttgtggccatttgtgtgcttacaggctattcgatcactacagccagc
ttctccgtctatgttgtcaacgagcgtcacagcggctccaagaggcttcagcacatcgca
ggcatcagcgagcccttctactgggccattaacttcctttatgacatgatcctctatctg
attcctgtcagtttgaccatcggtgttgttgcagccttccagatttcagcattcacggat
caacaaaatttagctgccatttcacttcttctggtgctctttgggtttgccaccttccca
tggatgtatctcttgtcaggtgttttcaaggatggagagacagccttcatcacctatgtg
tgcattaaccttttcatcagtatcaataccattatatccacctctattatcttctttctg
gctgaaagtacaacacctgctgcaaagagagagagcattcagaatatcttcaggatattg
agcgatgccttcctcatcttcccccaattcagctttggaaatggactgatgaaactggca
agaatgaacgttgaggtccaggttcttagaggctatggcattgatgcctacaagaaccca
ttctctacagaggttcttggctggatgttcatctcctccatcatccaaggcgtggtcttc
tttgggctgcgcctcttactcaacatgttcctgttgcgcaaagtcaggcacctgattttg
ggcagaaaaaaggtgtccgaggtggttgaggacgaggatgaagatgtagcagctgaacgc
ttgcgggtgtccagtggagcggcaggtgaagacatcctacaagttaaccagctcacgaag
atctatcagcatgtcaacaagaagatttatgcagtcaagaagctttctgtgggaattcct
gcaggagagtgctttggtctgctgggagtgaacggagcaggaaaaacaaccactttcaag
atgctcacaggagatgttagccccactgatggtactgcgcagatcagggactgggatggg
cggctagtagacattatggagtgccggcgcaagggaattaacatcggctactgtccccag
gtggatgcactggataatctgctcactggagaagagcatttgtatttttatgctcgtatt
caaggcatcacaaagagggagatagacagggtggtgaagtaccttctaaaaaagttggag
ctgaaccaccatcgaaatgtaatcaccgatggctacagttgtggcacacgcaggaagctt
tcgacagctattgctctcattggacatccacaaatcctgctcctggatgagccaagctct
ggcatggatcctcgaaccaaacgccacctgtggaaaattatctcagaagaggtgaaagga
aagtctgcagtcgttctcacttctcacagcatggaggagtgtgaggcactgtgtagccgc
ctcgctattatggtgaaaggtcagttccgctgcctgggctctttgcagcacattaagaac
aggttcggcagtgggttcactgtgaagatgcacttggcagaacctgccagtgatgtagag
ccaatcactgttttcatgcagaaacaatttcccagcacttatttgaaggaccagcactcc
tccatggcagagtatcatgttccgttcgcaccaggaggagtggctgacatcttccaacac
ttggaggataacaggacttctctgaagatcaagcacttttccgtgagccagaccaccttg
gatgaggtctttatcaactttgccatgggaaattttcacatggaatccatctcaactcac
agcaaaggagaagatgatgacctgggcttcataaaagaagtacagacatag
DBGET
integrated database retrieval system
