Syngnathoides biaculeatus (alligator pipefish): 133512080
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Entry
133512080 CDS
T09681
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133512080 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133512080 (u2af1)
Spliceosome [BR:
sbia03041
]
Complex A
U2 snRNP components
U2 related factors
133512080 (u2af1)
Complex B
133512080 (u2af1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
Torus
RRM_1
zf_CCCH_4
zf-CCCH_2
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
133512080
NCBI-ProteinID:
XP_061697330
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All DBs
Position
14:complement(24921709..24926013)
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AA seq
239 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SADGLTCAISDMEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRCE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKGGRHRSRSRSRDRRSRSRDRDRGDRGGRGGGRDHDRRRSRDRERSGRF
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacttggcgtcgatttttgggacagagaaagacaaagtaaattgctctttt
tattttaaaatcggtgcctgtcgacatggtgaccgctgctccagattacacaacaagccc
actttcagtcagaccatcgctctcttgaacatttaccgcaacccccagaatagcgcgcaa
tcagcagatggcctcacctgtgccatcagtgacatggaaatgcaggagcattatgatgag
ttttttgaggaggtcttcacagaaatggaggagaaatacggcgaggtggaggaaatgaac
gtgtgcgacaaccttggagaccacctcgtggggaacgtctacgtgaagttccgctgcgaa
gaggacgccgagaaggcggtgatcgacctgaacaatcgctggttcaacgggcagcccatc
catgccgagctctctcccgtcacagacttcagggaagcttgctgtcgccagtatgaaatg
ggggaatgcactcgaggtggcttctgcaatttcatgcacctgaagcccatctcgcgagag
ctgaggcgagagctgtatggacgtcgccggaagggaggccgccacaggtccaggtcacgt
tccagggaccgccgatcccgctcgagggaccgggacagaggcgaccgagggggccggggg
ggcggccgcgaccacgatagacgccgttcccgagacagggagcgctcgggacgcttctga
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