KEGG   Syngnathoides biaculeatus (alligator pipefish): 133512080
Entry
133512080         CDS       T09681                                 
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133512080 (u2af1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sbia03041]
    133512080 (u2af1)
Spliceosome [BR:sbia03041]
 Complex A
  U2 snRNP components
   U2 related factors
    133512080 (u2af1)
 Complex B
    133512080 (u2af1)
SSDB
Motif
Pfam: zf-CCCH Torus RRM_1 zf_CCCH_4 zf-CCCH_2 Nup35_RRM_2
Other DBs
NCBI-GeneID: 133512080
NCBI-ProteinID: XP_061697330
LinkDB
Position
14:complement(24921709..24926013)
AA seq 239 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SADGLTCAISDMEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRCE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKGGRHRSRSRSRDRRSRSRDRDRGDRGGRGGGRDHDRRRSRDRERSGRF
NT seq 720 nt   +upstreamnt  +downstreamnt
atggcggagtacttggcgtcgatttttgggacagagaaagacaaagtaaattgctctttt
tattttaaaatcggtgcctgtcgacatggtgaccgctgctccagattacacaacaagccc
actttcagtcagaccatcgctctcttgaacatttaccgcaacccccagaatagcgcgcaa
tcagcagatggcctcacctgtgccatcagtgacatggaaatgcaggagcattatgatgag
ttttttgaggaggtcttcacagaaatggaggagaaatacggcgaggtggaggaaatgaac
gtgtgcgacaaccttggagaccacctcgtggggaacgtctacgtgaagttccgctgcgaa
gaggacgccgagaaggcggtgatcgacctgaacaatcgctggttcaacgggcagcccatc
catgccgagctctctcccgtcacagacttcagggaagcttgctgtcgccagtatgaaatg
ggggaatgcactcgaggtggcttctgcaatttcatgcacctgaagcccatctcgcgagag
ctgaggcgagagctgtatggacgtcgccggaagggaggccgccacaggtccaggtcacgt
tccagggaccgccgatcccgctcgagggaccgggacagaggcgaccgagggggccggggg
ggcggccgcgaccacgatagacgccgttcccgagacagggagcgctcgggacgcttctga

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