Syngnathoides biaculeatus (alligator pipefish): 133512146
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Entry
133512146 CDS
T09681
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133512146 (aff3)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
133512146 (aff3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
133512146
NCBI-ProteinID:
XP_061697474
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All DBs
Position
14:complement(25593696..25614135)
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AA seq
1121 aa
AA seq
DB search
MPTVLRSGRGKLCFGPSLHRCLFPQETTGQHGCAKDIWGDMTQPWPSQRALAGDQRILFN
PTDGKQPPARQRQGRGDALPPTNRHPRVAPHKSMLVDDLKLSSDEDDVQRATDESASWDR
HSPSHTNGRRARNTSSDSSRSRSSAESVSSSLRSRSSSPPASPRDGRSPRGGNKESDRPT
AAQWQLDKWLKKSKKKAAGRDRSIPGNPPSPHTLRAPSPARCWDSNQDYRPSQSPIPSPQ
LSYRPDSPLLSPGYSFCPSPLSGTCPSPSISRYSPGPSPVSSVFPSLCGSPRTQRSPDPI
QRDPQGSPTPSPSQYYHYPEVQSHLYSAPPPRKTKVRSVSNSKAKTKHTNSTEPPLHQHR
PKARPTEDKDHRQNKSKAVSNSSDSCRPQSSSHSVTKKPAKDTSHYELIQGGRHGLSSDR
KTQPPVRHASQHNTARTKHHLPTARETGISQSSTARASGNNHLRPGPDVQPWARPSAVNA
NPFKTSDKPLQAKKREVRQRESPHTEGEGRKDKRREDRHRDEERKEDKRLAEAQLLRRRW
IESSAEEEEGDVVAVEGKRRRPREEQQIRESQTIQSKEQHRHHDHARQQRGGEKEVNRGD
TSSPPSPPPQRRSPSPSASSNSDSEYQVAKVPADSTSLQSLRQRAQHGCGRPDGSKSRGT
HSKSPAEGQQSEDGHKLYTLVPFGRSEQATVPSQRGLRNLVVHIDLCLLKRVPDTSVHST
VKATDSASSSSSSSTTKGKQAKAMKHLYTPETVSKDTRRKRKLENAVSHKEGKKNTPLAV
GRRESSSLAAERLLSTETVHNGFLEEYLDNKRPLSPLSPLSDSTETSNLPSKAKNGEASY
RNNEKNRNPALKPKKEVDCVKVSRQHSSDSWGPAGYRGAASNTETSHHAEYYLHEAKRIK
HRADAMVDKLGKAVNYVDAALSFMECGKAMEQGPLEAKSPYTMYAETVELIRYAMRLKSH
SGPGARQEDKQLAVLCFRCLALLYWQMFRLKKDHALKYSKVLLDYFKTSPKGPPMPSCWN
DTGKETAGPPPPRLSDATPPSLISIPQRIHQMAASHLNITNSVLYSYEYWEVADNLAKES
KEFFNYLNTLSGPLTLHSSIAQAVQYTRQALQWIRISAKLT
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgtcctgcgcagtggcagggggaaactttgcttcggaccttcgctgcaccga
tgtctctttcctcaggaaacaacaggacaacacggctgtgccaaagatatttggggggac
atgactcagccgtggccgtcccagcgagccttagcgggtgaccagcggatcctcttcaac
cctacggatggaaaacagccgccagcacgacagaggcaaggacggggggacgctctgccg
ccgacgaaccgtcacccccgcgtggcgcctcacaagtcgatgcttgttgacgacctaaaa
ttaagcagcgatgaggatgatgttcaaagggccaccgatgaatcggcttcctgggacaga
cacagcccgtcgcacacaaatggcaggagggcgagaaataccagctcggactcctcgcga
tcccgctcttccgcggagtcggtcagcagcagccttcgttcccggagctccagcccacct
gcctcgcccagagacgggcggtccccgcgcggcggcaacaaggagagtgatcggcccaca
gctgcccagtggcaattggataagtggctgaagaagtccaagaaaaaagcagctggaagg
gaccgtagcattcctggaaacccgccctctccgcacacgctccgagcgccgtctccggca
agatgctgggacagcaatcaggattaccgccctagccaaagtcccattcccagcccgcag
ttgagctacaggcccgacagccctctgctgagtcccggttacagcttctgcccgagcccc
ctttctggcacctgcccgagtccgagcattagcaggtacagtcctggaccgagtccagtt
tcaagtgttttcccaagtctatgcgggagcccgagaacgcagcggagccctgatccaatt
cagagagaccctcagggaagtcctactccatcaccttcgcagtactaccactaccctgag
gttcaaagtcatctgtactcggcgccacctccccgcaagacaaaagttaggtcagtgtcc
aactctaaagcaaaaaccaagcacacaaatagcacagagcctccccttcatcagcacagg
cccaaagcgaggcccacagaagataaagaccacagacaaaacaaatccaaagcggtttca
aactccagtgacagttgcagaccacagagcagttcccattcagtcactaaaaagccagcc
aaagacacatcacattacgagctgatccagggaggccgacacggcctcagctccgaccgc
aagactcaacctccagttcggcacgcttctcagcacaatacagcgagaacaaaacaccat
cttccaactgcccgtgaaaccggcatcagtcaaagttcgaccgcgagggcttccggtaat
aatcacttgagaccaggtcctgacgtacaaccctgggccaggccgagtgctgttaatgct
aatcctttcaaaacatcagacaagccgctccaggccaagaaacgtgaggtgcgccagaga
gaaagtcctcataccgaaggcgaggggaggaaagacaaaaggagggaggacaggcacagg
gacgaggagagaaaggaagacaagaggctggcggaggcgcagctcctgagacgtcgctgg
atcgagagttccgcagaagaggaggaaggagatgtggtagctgtcgaggggaagaggagg
cggcctcgtgaagaacaacaaatccgtgaaagtcaaacaatccagtccaaagaacaacac
cggcatcacgatcatgcgcgccaacaacggggaggtgagaaagaggtgaaccggggagac
acttcatctccacccagtccacctcctcagcgacggtccccctcaccatctgcctcgtca
aattctgattcggaataccaagtcgccaaggttccggcggactccacttcactccagagt
ctccgccagagggcccagcacggctgcggtagacccgatggcagcaagtcccgaggaacg
cactcaaaaagcccagccgaggggcagcagagcgaggacgggcacaaactctacacactg
gtcccgttcggccgaagcgagcaggccacggtgccttcccaacgaggcctgagaaacctg
gtggtgcacatcgacctctgcctcctcaagagggtcccggacacatctgtccattccacc
gttaaagccactgactctgcctcctcctcctcttcttcttcgacgacgaaaggcaaacaa
gcgaaggctatgaaacatctgtacacgcctgagaccgtctccaaagacaccagaaggaaa
cgcaagttggagaatgccgtgtcacataaagaaggcaagaagaacacgccgctcgcagtc
ggtcgcagagaatcgtcgtcgcttgcggctgagcgtctcctttcaaccgagaccgtgcat
aatggatttttggaggaatacttggacaacaagcggccgttatcgcccctgtcgccgctg
tccgacagcaccgagaccagcaacctcccatccaaagcaaaaaacggcgaggcttcttac
aggaacaacgagaagaacagaaatccagcacttaagcccaaaaaggaagtggattgcgtc
aaagtgtccagacagcattcgtccgattcttggggccccgccggatacagaggagccgcg
tcgaacacagaaacgtcacaccacgccgagtactacttacacgaagccaaaaggataaag
caccgtgcagatgccatggtggacaagctgggaaaagccgtgaattacgtcgacgcggct
ctctcgttcatggaatgcggcaaagcgatggagcaaggcccgctggaggccaaatccccc
tacaccatgtacgccgagacggtggagctgataaggtacgcgatgaggctaaagagccac
tccggtcccggagcccgacaagaggacaaacagctggcggtgctctgctttcggtgtctc
gccctcctgtactggcagatgtttcgtttaaagaaggaccacgcgctgaaatactccaaa
gtactgctcgactactttaagacttctcccaaggggcctccaatgccgtcctgctggaac
gacaccgggaaggagacagcagggccccctcctcctcgactgagcgacgcgaccccaccc
tcgctcataagcatccctcaacgtatccaccagatggcggcgagtcacctaaacatcacc
aacagcgtcctgtacagctacgaatactgggaagttgcggacaacctcgcaaaggagagc
aaagagttcttcaactacttgaatactctgtcggggccattgacgcttcacagcagcatc
gctcaggcggtccagtacaccaggcaagctcttcagtggatccgcatcagtgccaaactt
acctga
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