Syngnathoides biaculeatus (alligator pipefish): 133512174
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Entry
133512174 CDS
T09681
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2 isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133512174 (ttf2)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
133512174 (ttf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
133512174
NCBI-ProteinID:
XP_061697523
LinkDB
All DBs
Position
14:complement(19090844..19103333)
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AA seq
1132 aa
AA seq
DB search
MDKVICDVHGCVCMLKTGVKDGPSKGKSFYVCVDKRGCDFSKATSISPSHCLQHEDSMVE
LQALTSNQQQQCNRLYYRCVVGKKAGYQWCGNVPWRVPEKEEKKHEKRAQSSCLPPVRNP
FKAPEKVDKESGWRKIHGESGGKDNMEKKHKSQEEKENEGEGQTQIADRNRGKHLPAGMK
LKKKSVDKTLHPNTSISKSDTATSDVTPCVAKSDKASFDASVETASVCPSTLKDGITTSM
PQNATATIDGSVSDPKTDPPTSTVSMSVPESTIVTPRGPIVTERVSASANKSNMPPSKRS
EPMAFASRGSDDNAQWRNPQSKQYHDDEDDDVVLVSVKPPQKTPHAPTTTIQKPLTAYPG
FQPASNLKGPPKDPQAMHRMLSLQLHQKKATLSVVNVEALPDKGERLRTQVRELEVALEN
LNLAPADETPSTSQVVKPLSRPGGTILIPAPPAPDSYLQHSQGFSQMYGGHQAFYGGRMT
DDRLLAVKNATCEAIDHLHTSLESCPSADTEALDPKGLKVSLLAHQRRALAWLLWREAQK
PCGGILADDMGLGKTLTMIALILTQKINAKLKAKEEGQTKEEEEEKKKEGWLSRADWRPV
NSRGTLVICPASLVHHWKKEIERHVKVARLSVYLYHGADRNKNPRVLADHDVVVTTYSLV
SRESSSQKEGNKSNNEANNVPAVKGVGPLLRVTWGRVILDEAHNIKNPKVQQSMAVCELR
SAARWAMTGTPIQNNLLDMYSLLKFLRCSPFDEYKVWKAQVDNGSKRGRERLNILTRTLL
LRRTKDQQDSSGRPLVALPNRTCKMHQLKLSEDEQAVYDVVFAQSRSTLQNYLKKHEEND
IKRGSDSASNTFKRASQEFGLSQSDPPVSSGQQPQQAPSTAHILSLLLRLRQCCCHLSLL
QKTLDSSELQGDAVVLSLEEQLNALSLTSGRSTLDPAEEMVGLNGMTFPLRLFEEGSRST
KISAIVSELEAIRAKGDNQKSVIVSQWTSLLHIVAIHLRQMGLRYSIIDGTVNPKRRMDL
VEEFNTNPKEPQVMLVSLCAGGVGLNLVGGNHLFLMDMHWNPALEDQACDRIYRVGQRRD
VIIHRFECEGTVEQKISTLQAKKKQLAQSVLSGSESAVAKLSLIDLKIIFGV
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagttatttgtgatgtccacggttgcgtgtgtatgctaaagacaggggttaaa
gatggcccttccaaaggcaaaagtttctacgtgtgtgtggacaagcgtggctgtgacttc
agcaaagcgaccagcatctctccctcccactgcctccagcatgaggattccatggtcgag
ctccaagccttgacttccaaccagcagcaacagtgcaacaggttgtactacaggtgcgtc
gtgggtaaaaaagcagggtatcaatggtgtggaaatgtgccctggagagtgccagagaag
gaagagaaaaagcatgaaaaaagggcacaaagctcctgcctaccgccagtgcgaaacccc
ttcaaggctccggagaaagtggacaaagaatcagggtggagaaagatccacggagagagt
ggggggaaggacaacatggaaaagaaacataaaagtcaagaagaaaaagaaaatgagggg
gaaggtcagacccagatagctgacagaaacagaggtaaacatcttccagcaggtatgaag
ttgaagaagaaatctgtggataaaacacttcatcccaacacgtctatatccaaaagcgac
acggccacctctgacgtcaccccatgtgtggccaaaagtgacaaggcctcctttgacgct
tctgttgaaacagcgagtgtctgcccctctacgctcaaggatggcataacaacctccatg
ccccaaaacgccacggccaccatcgacggctctgtgtctgaccccaaaaccgacccgccc
acctccactgtttccatgtctgtgccagaaagcacaatagtcacccccagaggtcctata
gtaaccgagcgggtctccgcatcggcgaacaaaagcaacatgcccccttccaaacgttct
gaaccaatggcatttgcctccagaggttctgacgacaacgcgcagtggagaaaccctcaa
agcaaacagtaccacgatgatgaagacgatgacgtagtgctggtgtcggtgaagccccct
caaaagacgccccatgcacctaccactaccatccagaagcccctgaccgcctaccctggc
tttcagcctgcctccaatctgaaaggtccaccgaaggaccctcaggcgatgcacaggatg
ctgtctcttcagctccatcagaaaaaggccaccctttcggtggtgaatgtggaagcgttg
cctgacaaaggcgagcgtttgaggactcaggtccgggagctggaggtggcgctggagaac
ctcaacctcgctcccgcagacgagactccatccaccagccaagttgttaagcctttaagc
cgcccggggggcaccatccttatcccagctccccccgccccagactcctaccttcaacat
agccagggattctcccagatgtatggagggcaccaggctttctatggcggccgcatgaca
gatgaccgtctgctggcggtgaagaacgccacgtgcgaggccatcgatcacctgcacaca
tcgctggagtcgtgcccgtctgccgacaccgaggcattggatcccaaagggctcaaggtg
tcgctgttggcccaccagagaagggctctggcctggctgctctggagggaagcccagaaa
ccatgcggtggcattttggcggatgacatgggtctgggtaaaacgctcaccatgattgcg
ctcatactgacccagaagatcaatgcaaagctgaaggctaaagaggagggccagacaaaa
gaggaggaggaggagaagaagaaggagggctggctctcaagagctgattggcgaccggtg
aattccagaggcaccctggttatctgcccggcctcactggtccaccactggaagaaggag
atcgagcgacacgtcaaggtggccagactcagtgtttacctgtaccatggagctgaccgc
aacaagaaccccagagtgcttgctgatcacgacgtggtggtgaccacatacagtttggtg
tcaagggaatcctccagccagaaagaggggaacaaatccaataatgaagccaacaatgtg
ccagcagtgaagggggtaggccccctcctgcgtgtgacgtggggccgggtgatcttggat
gaggcgcacaacatcaagaaccccaaggtgcagcagtctatggccgtgtgcgagctgagg
tcagctgcccgctgggccatgaccggcacgcccatccagaacaacctgctggacatgtac
tccctcctcaagtttctgcgttgctctccattcgacgagtacaaagtatggaaggcacag
gtggacaacggctccaagcgtggcagggagcgactcaacatcctgaccaggactctcctg
ttgcgacgcaccaaagaccagcaggattcgtcgggaagaccgttggtggcgcttcccaac
cgtacctgcaagatgcatcaacttaaattgtctgaggatgagcaagcagtctacgatgtg
gtcttcgcccaatccagatctaccctgcagaactacttaaagaaacatgaagagaacgat
attaagcgaggaagtgactctgcttccaataccttcaagcgggcttcccaagaatttggc
ttgtcccagtcagacccgccagtctcatctggccagcaacctcagcaggcccccagtacc
gcccacatcctgtcactgctgctgcgcctgcgacagtgctgttgccacctatcgctgctc
caaaagactctggactcctctgagctccaaggcgatgccgtggtcctgtccctggaggag
cagctcaatgctctgtcgctcacatcaggacgctcaacattggatcctgccgaggaaatg
gtggggttgaacgggatgactttcccattgcgactgtttgaggagggcagcaggagtacc
aagatttctgccattgtctctgagctggaggcaatccgagcaaagggcgacaaccagaaa
agtgtgattgtgtcccagtggactagtctgctccacatcgtggccatccacctgcggcag
atgggcctgcgctacagcatcatcgatgggaccgtcaaccccaagcgccgcatggaccta
gtggaggaattcaacaccaaccctaaagaaccacaggttatgctggtgtctctctgcgct
ggtggtgttggccttaacctcgtgggcgggaatcacctcttcctcatggacatgcactgg
aacccggccttggaggaccaagcttgcgaccgaatctaccgagtgggacagcggagggat
gtcatcatccacaggttcgagtgcgagggcacggtggagcagaagatctccacgctgcag
gcgaagaagaagcagctggcccagagtgtgttgtcgggatcagaaagtgccgtcgccaag
ctctctctgatcgacctcaagatcatttttggcgtttga
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