Syngnathoides biaculeatus (alligator pipefish): 133512409
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Entry
133512409 CDS
T09681
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133512409 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133512409 (mid1)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133512409 (mid1)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133512409 (mid1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_2
TRIM_CC
zf-C3HC4
PRY
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_5
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
F36G3_coil
ZNF512_C2HC
NDNF
DUF8512
Motif
Other DBs
NCBI-GeneID:
133512409
NCBI-ProteinID:
XP_061697995
LinkDB
All DBs
Position
14:22590241..22635595
Genome browser
AA seq
670 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCSNCAHRILVSHCTPSEPVQSIRAFQCPTCR
YVINLNQKGLEGLKRNVTLQNIIDRYQKASLSGPNSPSQPRRERATPDGGAMTQPGGERV
PCQFCEREPPQDAVKTCVTCEVSYCDDCLKATHPNKKPFTGHRLVEPLLDSHMRGVMCLE
HEDEKVTMYCLTDDQLICALCKLVGRHRDHQVAGLGDRYDKLKHALDTNLGNLIKRTGEL
ETLMGKLIQTCQHVEINASRQENKLLEECDLLINIIQQRRQIIVTKIKEGKTVRLRKLAQ
QIGSCKQCVERASSLIAQADHTLKETDPSRFLQSAKSICERVSMATASSQILLPEINLND
TFDTFALDFTREKKMLESLDYLTAPNPPVIREELCTASYDTITVHWTSDDEFTVLSYELQ
YAIFTSHTNVVSLCNSADSWMIVPNIKQNHYTVHGLQCGTKYVFIVKAINQAGNRSSEPG
KLKTNSQPFKLDPKSAHRKLRVSHDNLTVERDETSSKKSHGQDRFGGTSSYGVTGNAYID
SGRHYWEALIGGSTWFAVGIAYKSAPKHEWVGKNSASWVLSRCNNSWVARHNSKETPLEP
SPHLRRLGVLLDYDSGFLSFYDAVGSQHLHTFDVAFAQPVCPVFNVWNRCITILTGLPIP
DHLEGSESGN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgctggagtccgagctgacatgcccaatttgtctggagctctttgaggacccg
cttctcctgccctgcgctcacagcctttgttccaactgcgcccaccgcatcctggtgtcg
cactgcacccccagcgagcccgtccagtccatccgcgccttccagtgccccacctgccgc
tatgttatcaatctcaaccagaaaggcctagaaggactcaagcgcaacgttaccctgcag
aacatcatcgaccgctaccagaaggcctccctcagcggacccaactcgcccagccagccc
cggcgggaacgagccacccccgacggcggcgccatgacgcagcccggcggagagcgggtg
ccgtgtcagttctgcgagcgggagccgccccaagacgccgtgaagacttgcgtcacgtgc
gaggtgtcctactgcgacgactgcctgaaggccacccaccccaacaagaagcccttcacg
ggccaccgtctggtggagcccctgctggactcccacatgcgaggggtcatgtgcttggag
cacgaggacgagaaggtcaccatgtactgtttgaccgacgaccagttgatctgcgccttg
tgcaagctggtcggacggcacagggaccaccaagtcgccgggctgggggaccgatatgac
aaactcaagcacgccttggacaccaacctcggcaatctcatcaagaggaccggcgagttg
gaaacgctgatgggcaaactcatccagacgtgccaacacgtggagataaacgcatccagg
caagaaaacaagctgctggaggagtgcgacctcctgatcaatatcatacagcagaggagg
caaatcatcgttaccaagataaaagaggggaagacggtgcgcctgaggaagctggcccag
caaatcggcagctgcaagcagtgcgtcgagagggcctcctcgctcatcgctcaagccgac
cacaccctgaaagagaccgacccgtcccgcttccttcagtcggccaaaagcatctgcgag
agggtctccatggcaaccgcatcctctcagatcttgctaccggaaataaacctgaacgac
acctttgatacttttgctctggacttcacgagggagaagaagatgttagaaagcttggat
tatctcacagcgccaaatccaccggtaatccgcgaggaattatgcacggcttcgtacgac
accatcacggttcactggacgtcagacgacgagttcaccgtcttgtcctacgaactccag
tacgccatcttcaccagccacaccaacgtcgtcagtttgtgcaattcggccgacagctgg
atgatcgtgccgaacatcaagcaaaatcattacacggtgcacgggctgcagtgcggcacc
aagtacgtcttcatcgtcaaagccatcaaccaggccggaaaccggagtagcgaaccggga
aagctcaagaccaacagtcagccattcaagctggacccgaagtccgctcaccggaagttg
cgggtgtcccacgacaacctgacggtggagagggacgagacgtcctccaagaagagccac
ggccaggaccgcttcggcggcaccagcagctacggcgtcacggggaacgcctacatcgac
agcggccgccattactgggaggcgctcatcgggggaagcacgtggtttgcggtaggtatc
gcttacaagtcggccccgaagcacgagtgggtgggcaagaactcggcctcctgggtgctg
tcccgctgtaacaactcgtgggtggcgcgtcacaacagcaaggagacccccttggagccc
tcgccccacctgcggcgactcggcgtgctgctggactacgactcgggcttcctgtcgttc
tacgacgccgtgggctctcagcacctgcacacgttcgacgtcgccttcgcgcagcccgtc
tgccccgtgttcaacgtgtggaaccgatgcattaccatcctcaccggactgcccatccca
gaccatttggagggcagcgagtccggcaactga
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integrated database retrieval system
