Syngnathoides biaculeatus (alligator pipefish): 133512468
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Entry
133512468 CDS
T09681
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B-like isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbia01009
]
133512468
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbia03009
]
133512468
Protein phosphatases and associated proteins [BR:
sbia01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133512468
Ribosome biogenesis [BR:
sbia03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133512468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
TAN
GPR128_GAIN_subdom_B
Motif
Other DBs
NCBI-GeneID:
133512468
NCBI-ProteinID:
XP_061698116
LinkDB
All DBs
Position
14:1067360..1137487
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AA seq
733 aa
AA seq
DB search
MAAVQDLEIQFAQKLASNEKSIRTKALKRLKKYIHVRSQKTTDGFTSDELLKLWKGLFYC
LWMQDKPLLQEDLSDSISTLIHSFHDINGQLLYLESCLKTFKREWNGIDRLRMDKFYQLI
RFMFRKSFEMLKKKNWESSVVARFLELFATELLNSGNVAPAGLQFHIFDLYLTELAAVGS
SELTADQNLIFIEPFCKTAAKTKDRILFRAICSSIFSTIIDQAPDAIIDLMKELNVAECP
DLGQSSEGDEKNLVMQIDGSKSNLEQDDHKVRSGDLNSESPFDTITPVLQFNYAALADKL
FDMASRTTTPSSNRRRLYKIIKVLRDISEGIFPQDGFSEQVSTDQDDEMFGIRKRMNDEP
LTEQATMNRKKKMKFKQERDSGQDVKPTDVIVKDIKKPKKTKKRECHGGSLIDLNVGTFN
VEDTDIPNQRSILQNGSADNPEPYVSRSERACKLSSSIPSNDKSEKKTKRPRSKLEQEKR
IGNAGTPQEVDTTPVVTVDNEGTSKATNFEAQVHKMESPEPEFQLLNNTKTKAKKVKDFV
TGSQQKLFDSPSVSFRTNERESGSDLHTGTPLKKKNKQISVQVKNVSSTEEEPLVFSSPE
KPKKKKRKIPVEFDFEAVEHESATPTNNSTPRAASVKKVKMGQTPTSDSKKVTFRLKNNK
TAEFMKNDRSLLLSPEGSSKVPFDPKQKPKSGVLKSSPMPLSTNIKKYKTSRNMSLSTPK
SMPKRRPTAADFF
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggttcaagatcttgagattcaatttgcacaaaagttagcatcaaacgaaaag
tctatccgaacaaaagcattaaaaaggttgaagaaatatatccacgtcagatcacagaaa
acgaccgatggctttacgagtgatgaactgctcaagctatggaaaggtctcttctactgc
ttgtggatgcaggacaaaccacttttacaggaggatctctctgactctatttctacactg
attcacagctttcatgatattaatggacaactattatatctggagagctgcctgaagacc
ttcaaaagagagtggaatggtattgacagactgcgaatggacaagttttaccagctaatc
cgcttcatgttcaggaaaagctttgagatgctgaagaaaaaaaactgggagagcagtgtg
gttgcaagattcctggagctctttgcaacagagcttctgaacagtggcaacgttgcaccc
gctggtctgcagttccatatctttgacctttacttgactgaactagcagctgtgggttct
tcagagcttacagctgaccagaacctgatatttatcgagccattctgcaaaacagccgcc
aaaaccaaagatcggatacttttccgagccatctgtagcagcatcttcagcacgattatt
gaccaggcgcctgatgccattatagatttgatgaaggagctgaatgtagcagagtgccct
gatttaggccagtcctctgaaggggatgaaaagaaccttgttatgcagattgatggtagt
aaatcaaacttggaacaagatgatcacaaggttcggtcaggagacttgaactcagagtct
ccatttgataccataacaccagttctacagtttaactatgcagcgcttgctgacaagctg
ttcgacatggctagtagaactactacacccagctcaaatagacggcgactctacaaaatc
atcaaagtgctgcgggatatcagtgaaggaatatttcctcaagatggattttctgagcaa
gtctctacagatcaggatgatgaaatgtttggcatcagaaagagaatgaacgatgaacct
cttacagagcaagcaactatgaatcgaaagaaaaaaatgaaattcaaacaagagagagac
tctggtcaagacgtgaagccaacagatgtgattgtcaaagacatcaaaaagcctaagaaa
acaaaaaaaagggaatgtcatggtggatcgttaattgatttgaatgtggggacatttaat
gtggaggacactgacattccaaatcaaaggagcattctgcagaatggttctgcggataac
ccagaaccatatgtttctaggtcagagagagcctgcaaactcagttcttccatacccagc
aatgacaaatcagaaaaaaaaaccaagaggccaagatcaaagcttgaacaagaaaaaagg
attggtaatgccggcactccccaggaggttgacacaactccagtggtgacagttgacaat
gagggaacttcaaaagccactaactttgaagcccaagtacacaagatggaaagtcctgaa
cctgaatttcagttattaaacaacacaaagacgaaggctaaaaaagtgaaagactttgtg
acagggtcacagcaaaaattgtttgattctccgtcagtctcttttcgtaccaatgaaagg
gaatctggatcagaccttcacacgggaactccactgaagaaaaagaataagcaaatctca
gttcaggtcaaaaacgtgagcagcactgaagaggagcctctggtgttctcttctccagag
aagccaaagaagaagaaaagaaaaatacctgtagaatttgattttgaagctgttgaacat
gagtctgccacaccaaccaataacagtacacccagagcagcgagcgtcaagaaggtaaaa
atgggtcaaactcccacatcagattccaagaaggtgaccttccgtctaaagaataataaa
acagctgaattcatgaagaatgatcgcagcctgttactaagtccagagggctcctcaaaa
gtgccctttgacccaaaacagaaacccaaatctggcgtcttaaagtcttctccaatgcca
ctctccaccaacatcaagaaatataagactagcaggaacatgagtttgagtactccaaaa
agcatgcctaaaaggcggcccactgcagctgactttttttga
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