Syngnathoides biaculeatus (alligator pipefish): 133512553
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Entry
133512553 CDS
T09681
Symbol
lmo7a
Name
(RefSeq) LOW QUALITY PROTEIN: LIM domain only protein 7
KO
K06084
F-box protein 20
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133512553 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133512553 (lmo7a)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133512553 (lmo7a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
133512553
NCBI-ProteinID:
XP_061698275
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All DBs
Position
14:complement(26949665..27011033)
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AA seq
1960 aa
AA seq
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MEWREQSTVSCQDAFVEARRWIEAVTKKTFKGKDFRSALENGILLCDVINKIKPGTVRRV
NRLPTPIAGLDNINVFLKGCLKLGLKEAQLFHPGDLQDLSSRVTVNDEETDRRLKNVLIT
LYWLGRRAQGERSYDGPYLNFKAFEGLLGTALHKALQELSGQKGNTGLGDSWDSEPEELH
QSRESQGRGGGHRRDDSLDSLDSLGSQPLSISSDATLKGSSEGCCSDAEADAAFRMADKE
SLAYRRSVTLTPKVTTQFNQFLPTKDKPTGYVPAPLRKKRAERNDDSRRSWANPVYEEED
DVPIVRPPPDKSPASPAAHQRRAFEYESGSDSDSERPDPDLVTDDLASRRFHSPPPAPPV
NFSVPVGPAPGGPRPRGTVSSGVARSGGEEQKAERRPPVSTDSLFSDPYGDSEDEDDEVG
YADPVQDDLYARKVGAGLLVAGDASHHKFLPKLWTPQEDVHVRKIKTGSQRPWYRKMQGF
SRKSSGSSSDDSEPDVAPRPPSGPPPPRPSAAHNAKSPPVHPHSTPHLPKTALLETPSLA
FAPVDPTSGPRLVKCQRWPLLGRQDPREPPDPIDYDSIVPDLENDDMFARRTLAFRSNSE
LAAAKTPLSAKRCLFTSEEQINIVTQLPIKEEEEYPNIEQDDVVQRREKIQQQRRPLSGA
PDNFSPLAVPEPWDLPPELKTRLLCPPCPLARESPAKTSARVRTEPRPETDDMLVRKLAA
LHGKVSANQGGPRAPASCSEGDLQRWQAIREASQRRHKKRLMVQMLTAVKLQRQTSNSFD
GSKSTSDIAEESVLVRRRSQYEALEKYREHVKQSDDKWQDDLSKWKNRRKSVNSDIVRKK
EEREQVERITSGGSTRRSKTYKEMQDDRENRRSGSVGSRIGRLSFDEDSDVFEKPKPRTR
DSLSRSYTVDTIHHSSGSSEAAQKENKTPVVPLRATKAEADATDAPSGSATRSSFHRPKP
SETTSSLRSSVFDSKAETEAISPPPRLSQKLPEPKNPVKVEPPSSGSLSKPPLGNKTEAK
AEAVSRISASLPRSYQRSDSLRLSSVVTPRPFGTQPSRIGSLTRSFTSDDSNSRVNGSGA
VSVKRPVASRYRQFMTAEDEAQSRSSPDQSSEDDDDDKQEETTGESLTFASSISSHPVPV
RREVSAKGPHEESSCEMRISLNQKPNSSRDFGFDVAWESGGAHVKSIQRGSPAETFQLQA
GDEVLTVNGHQVADMSYLDWKASMERALQEGGLVMDIRRHGKSNWDDRDPSSPPFQGRKT
VNLTRADHPILVGFPDAGSASTLDFTSLADTSAKVATRSVVDLASNGVDGGYPKVSMTTA
ESEPISMINIKRRSQFFERGGAESIMPDIPVPPITTSSARWSWDPEEERRRQEKWQREQE
RQLQEKYKRDQEKLQEEWTKAQEEIANSGPQRETVGSTFTSWELERQRETWQEEVEEERE
RSKLEAERKRMEEEFERQRREMRRREEELERERQEVERKRREREEELERRRREEELERER
QEVERKRRERGRAGEEEAGGGAGARERQEVERKRREREEELERRRREEELERERQEVERK
RREQEEELERQRLERRRREEELERQKAEERKRAAEEEERREREVEEERRRKEEEERRWRE
EREVEEERQRQEEEERRRREEAERREREVEEEEEERRQREEELLWQRRREAEKEELRRRT
ARERAAQEQRMKSLEEERLESRGSDAADAKAPQPTSQAELQRQQLLNDMKKKTNLLTDSS
WIRQRSGSAPGREDPPSTPRGGFLGHRDEPPNSWRSSWTPGTDPHIPNYSRPRSAYLAGA
PFHFASGAPPLSFRGPAAETTPWSRRATSPSLPPAAWSEPGSDPGCLQQRNRSVSGKKVC
TSCQTALGKGAAMIIESLGLCYHLSCFKCVECKSALGGSEAGAEVRIRNKQLYCNSCFVR
FQRPVSQPEARGLTRGPGEHHICGPKPNASNCLKKATNVS
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgagaacagtcgacggtcagctgccaggacgcgttcgtggaggctcggagg
tggatcgaagcagtcaccaagaaaacttttaagggcaaagacttccgatcggctctggag
aatggaattctgctgtgcgatgtgatcaacaagatcaagcccggcaccgtcaggagggtc
aacaggctgccgacgccaatcgccggtctggacaacattaacgtcttcctgaagggttgc
ctcaagctcggactgaaggaggcgcagctcttccaccccggagacctccaagacttgtcg
tccagagtcacggtcaatgacgaagagactgaccggagactcaaaaatgtgctgatcacc
ctttactggctcggtagaagagctcagggcgaacgttcctatgatggcccgtacctgaac
ttcaaggcattcgagggtttactgggaacggcacttcacaaggccctccaagaattgtct
ggtcagaaaggcaacaccggtttgggggacagctgggattcggagccagaggagcttcat
cagtcgagagaaagccaaggaaggggaggcggacacaggagagacgactccttggacagc
ttggactcgctgggctctcagccgctgagcatctcttcggacgccacgctcaaaggcagc
agcgagggttgttgcagcgacgccgaggccgacgcagccttcaggatggccgacaaggag
tccctcgcttaccgccgctcggtcaccctcacgccgaaggtcaccacccagttcaaccag
ttcctgcccaccaaggacaagcccacgggatacgtgcccgccccgctgaggaagaaacgg
gccgagcgcaacgacgacagccgccgcagctgggccaacccggtttacgaggaggaggac
gacgtgccgatcgtcagacccccccccgacaaaagtcccgcctcccccgctgctcaccaa
cggcgggctttcgagtacgaaagcggcagcgactcggactcggagcgtccggaccccgat
ctcgttacggacgacctggccagccgacgcttccacagcccgccgccggcgccccccgtc
aacttctccgtgcccgtcggcccggcgccgggggggccccgcccgagggggaccgtgagc
tccggtgttgctcgcagcggcggcgaagaacaaaaggccgagcgccgccccccggtgtcc
actgacagccttttcagcgatccgtacggcgactctgaggacgaggacgacgaggtgggc
tacgccgaccccgtgcaggacgacctctacgcccgcaaggtgggggccggactcttggtt
gccggggatgcctcgcaccacaaattcttgcccaagttgtggacaccgcaggaggacgtt
cacgtccggaagatcaagacgggttctcagaggccgtggtacaggaagatgcaagggttc
agccgcaagagttcgggctcctcgtcggacgattccgagcctgacgtcgctccccggccg
ccctcgggccctcccccccctcgcccctccgcggctcataacgcgaaaagtcctcctgtg
caccctcacagcaccccacacctccccaagaccgccctattagagaccccgtccctggcg
ttcgccccggtggaccccacctccggtcccaggctggtcaaatgtcagcgctggcccctt
ttagggcgccaagacccccgggagcccccggaccccatcgattacgacagcatcgttcct
gatttggagaacgacgacatgtttgccaggcggaccctcgccttccggtccaacagcgag
ctcgccgcagccaagacgccgctgtcggcaaagcgctgcctcttcacgtcggaggaacag
atcaatatcgtgacccagctccctataaaggaagaggaggaatatcccaacatcgagcag
gacgacgtggtccaacgtcgggagaaaatccagcaacagcgacgccccctgtcgggcgcc
cctgacaacttctccccgttggccgtccccgagccctgggacctcccgcctgaactcaag
accaggctcctgtgcccgccgtgccccctcgcccgggagtcgccggcaaagacgtcggct
cgcgtcagaacggagccgcgccccgaaacggacgacatgctggtccgaaagctcgccgcg
ctgcacggcaaggtgtcggccaatcagggcggcccccgtgcgccagcttcctgttcggag
ggcgacctgcagaggtggcaggccatccgggaagccagtcagcggcgacacaagaagcgg
ctgatggtccagatgctaacggctgtcaagttacaacggcaaacatcaaacagtttcgac
gggagcaaatcgaccagcgacatcgcggaagaatctgtgctggtcagacggcggtctcag
tacgaagctctcgagaaataccgcgagcacgtcaagcagagcgacgataagtggcaggat
gacctcagcaaatggaagaaccgccgcaagagcgtcaactctgacattgttcggaagaaa
gaggagagggagcaggttgagcggatcacgtccggaggcagcaccagaagatccaaaacc
tacaaagagatgcaagatgacagggagaatcggcgaagcggcagcgtcggcagccgcatc
gggaggctcagctttgacgaggacagcgacgtatttgagaaaccaaaaccccgtacccga
gacagcctgagcaggagctatacggtcgacaccattcatcactcctcgggctcatctgaa
gctgcccagaaagagaataagacgcccgtagtcccgctcagagccactaaggcagaagcc
gatgccacagacgctcccagtgggagcgccacccgcagctccttccacagacccaaacct
tctgagaccacatcctccctcaggagttcagtgttcgacagcaaggccgaaacggaggcg
atctcacctcctcctcgactatcacaaaagctgccagaaccaaagaacccagttaaggtg
gagcccccgtcctccggttctctgtccaaaccaccgctgggcaacaagaccgaagccaaa
gccgaagccgtttctcggatatccgcctcgctgcctcggagctaccagagatcggacagc
ttgcgattgtcgtcagtggtgacgccgagaccttttgggacccagccgtcccgcattggc
tcacttacccggagcttcacgtcggacgactccaacagtcgcgtcaacggcagcggggcc
gtttccgtgaagcgtccggtggcaagccgctatcgtcagttcatgaccgccgaagacgag
gcgcagtcacggtcgagccctgaccagagcagcgaggacgacgacgacgacaagcaagaa
gagaccacgggggagagcctcacatttgcgtccagcatctcatcgcatccagttcctgtc
aggagagaagtttcagccaagggaccccacgaggaaagttcctgcgagatgcggatcagc
ctcaaccagaagcccaacagcagtcgggactttggctttgatgtggcgtgggagtctggc
ggggctcacgtcaagtccatccaaaggggcagcccggctgagacgttccagttgcaggca
ggggacgaggtgctgacggtcaacggccaccaggtggcggacatgagctacctggactgg
aaggccagcatggagcgggctctgcaggagggcggcttggtgatggacatcaggcgtcac
ggcaagagcaactgggacgacagagatccgtcttccccgccatttcaaggccgtaagacc
gtcaatctgacccgtgcggatcatcccatacttgtaggtttccccgacgccggctccgcc
agcacgctggatttcacttcgctcgcggacacgtccgccaaggtcgccacccgctcggtg
gtggatttggcttccaacggcgtcgacggcggttaccccaaagtgtccatgacgactgca
gaatcggagcccatttctatgataaacataaaacggaggtcgcagttttttgagcgagga
ggagcagagtccatcatgccagatataccggttccgccaataactacgtcttcagctcgc
tggtcttgggatccggaagaggagcgcaggaggcaggagaagtggcagagggagcaggag
cgccaactacaggagaaatataagcgggaccaggagaaattgcaggaggagtggacaaag
gcccaggaggagatcgccaacagtggcccacaacgcgagaccgtgggctcgaccttcacc
tcctgggagctggagcgccagcgagagacgtggcaggaggaggtggaggaggagcgggag
cgctcgaagctggaggccgaaaggaagcgtatggaggaggagtttgagcgccaaaggcgg
gagatgcggaggcgggaggaggagctggagcgagagagacaggaagtggagaggaagagg
agggagcgggaggaagagctggagaggaggaggcgggaggaggagctggagcgagagaga
caggaagtggagaggaagaggagggagcggggaagagctggagaggaggaggcgggagga
ggagctggagcgagagagagacaggaagtggagaggaagaggagggagcgggaggaagag
ctggagaggaggaggcgggaggaggagctggagcgagagagacaggaagtggagaggaag
aggagggagcaggaggaagaactggagcgccaaaggctggagaggaggaggcgggaggag
gagctggagcgccagaaggcggaggagaggaagagggcggcggaggaggaggagaggagg
gagagggaagtagaggaggaacgccgaaggaaggaggaagaagagaggaggtggagggag
gagagggaagtggaggaggaacgccagaggcaggaggaggaagagaggaggcggagggag
gaggcggaaaggagggagagggaagtggaggaggaagaggaggagaggaggcagagggag
gaggagctgctgtggcagaggaggagagaggcggagaaggaggagctcaggaggaggacg
gcgagggagcgagcggcccaggagcaaaggatgaagtcacttgaggaagaaagacttgag
agtagaggaagcgacgcggcggacgcgaaggccccgcagccgacgtcgcaggcggagctc
cagcgccagcagctcctgaacgacatgaagaagaagaccaacctgctgacggacagcagc
tggatccgccagcgctcgggcagcgcgcccggccgcgaggacccgccgtccacgcccagg
ggcggcttcctcggccaccgggacgagccgcccaactcctggcgttcgtcgtggacgccc
gggacggacccccacatcccaaactactcccggcctcgctccgcctacctcgccggcgca
ccttttcacttcgcctcgggcgccccccccctctctttccggggcccggcggccgagacg
acgccctggtctcggcgggcgacgtccccttcgctgcctcccgccgcctggtcagaaccg
ggttctgacccgggttgtctgcagcagcgcaacaggtcggtcagcggcaagaaggtgtgc
acgtcgtgccagacggcgctggggaagggggcggccatgatcatcgagtcgctcggcctc
tgttaccatttgagctgttttaagtgcgtcgagtgcaagtcggccctcgggggatcggag
gccggggctgaagtccggatccgaaacaagcagctctactgtaactcctgcttcgtgcga
ttccaaagaccagtgagccaacccgaggcccgtgggctcacacgcggcccaggtgagcat
cacatctgcggtcctaaaccaaatgcaagtaactgtttaaaaaaggccacaaatgtgtca
taa
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