KEGG   Syngnathoides biaculeatus (alligator pipefish): 133512729
Entry
133512729         CDS       T09681                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04137  Mitophagy - animal
sbia04144  Endocytosis
sbia04145  Phagosome
sbia04148  Efferocytosis
sbia05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133512729 (rab5b)
   04145 Phagosome
    133512729 (rab5b)
   04137 Mitophagy - animal
    133512729 (rab5b)
   04148 Efferocytosis
    133512729 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    133512729 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sbia04131]
    133512729 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sbia04147]
    133512729 (rab5b)
   04031 GTP-binding proteins [BR:sbia04031]
    133512729 (rab5b)
Membrane trafficking [BR:sbia04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    133512729 (rab5b)
 Endosome - Lysosome transport
    133512729 (rab5b)
Exosome [BR:sbia04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133512729 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   133512729 (rab5b)
  Exosomal proteins of colorectal cancer cells
   133512729 (rab5b)
  Exosomal proteins of melanoma cells
   133512729 (rab5b)
GTP-binding proteins [BR:sbia04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    133512729 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase SDR-like AAA_16
Other DBs
NCBI-GeneID: 133512729
NCBI-ProteinID: XP_061698643
LinkDB
Position
14:7169746..7182640
AA seq 216 aa
MSSRGSGGRSNGALPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAEKRLVEYEEAQTYADDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNSTHAARHRGVNLQDPDAHSTRACCGGN
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagctctagagggagtggtggccgctccaatggcgcactgccacagaccaagatctgc
cagttcaagctggtgctgctgggtgacatggcggtgggcaaatccagcctggtgctgcgc
ttcgtcaagggacagtttgatgagtttcaggagaccaccataggagctgctttcctggcc
cagtcggtgtgcttagatgacaccacggtcaagtttgagatctgggacacagcaggacaa
gagcgttaccacagcctggcgcccatgtactacagaggagctcaagctgccattgtggtt
tttgacatcaccaagccagaaacctttgagagggccaaggcttgggtgaaggagctgcag
aggcaggccagtcccaacattgtcattgctttggcgggcaacaaggctgacctggccgag
aagagactagtagaatatgaggaagcgcagacgtacgctgatgacaccggcctgctcttc
atggaaacctcggccaagacggccatgaacgtcaacgagcttttcctggccattgcaaaa
aagatgccaaaaacagacactcaaaactcaacgcatgcagcacgacataggggggtcaac
ctccaggaccctgacgcccactccaccagagcttgctgtggcggaaactaa

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