Syngnathoides biaculeatus (alligator pipefish): 133512915
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Entry
133512915 CDS
T09681
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35-like isoform X1
KO
K12012
tripartite motif-containing protein 35
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133512915
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133512915
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
U-box
zf-B_box
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_5
zf-Nse
SPRY
zf-rbx1
zf-ANAPC11
AAA_11
Motif
Other DBs
NCBI-GeneID:
133512915
NCBI-ProteinID:
XP_061698972
LinkDB
All DBs
Position
15:complement(12820883..12829352)
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AA seq
511 aa
AA seq
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MLVCFHLVYGGGLNLSSEATLVLLLLPWTRPRFPATLRKKLSLPGAMAERIEEELRCPTC
LNIFKDPVMLKCSHSFCRACVKQWWKHKQARSCPVCRKSSLPVDVSPNLTLKNVCETFTK
VSVETETMCSLHGEKKKLFCLDHQQCVCLICRDAQIHSGHKFCSLDEIVQEHREKFQKSL
QKVKENLAEFTEIQNNCSEQAEYIKVQKDLVESKIKKNFEELRQFLEVEEQAKLAALREE
EQKKSHMMKEKMEALNRDMATLSDIISSTEKWVASDHVSFMNNYQVAMTTVQQLPDKPVL
PPGALLDEVKHLGNLKFTVWFRMKETVSYSPVILDPNTASPHFNLSEDLTSVNFNGEKRC
PMNPERCQYWNRVLGCALDPGTHIWDVEVGDNRDWLVGVVGGDSRLPHSSFVWGIKFNDD
KYQILSLPYPAKNLRVKVKVQRVRVRVDTDTRSLSFSESHTNTELYTRNHIPNWPNLSGN
ATMYPYFYTNNDKGPLKIIPLTFCVMTQNPK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgttagtctgctttcatcttgtctatggcggaggactaaacctgagttctgaagccact
ttagtcctcctgcttttgccctggaccagaccacgattcccggctacactgaggaagaaa
ttgtctttaccaggagccatggctgaaagaattgaggaagagctccgctgtccgacctgc
ctcaacatctttaaagatcctgtcatgctgaagtgtagtcacagcttctgtcgcgcgtgc
gtgaagcagtggtggaagcataaacaagcccgttcgtgtccagtttgtaggaaaagttct
cttccggtggacgtatctcctaatttgacactgaagaacgtgtgtgagacctttacaaaa
gtctctgtggagacagagaccatgtgcagtttgcacggggagaaaaagaagctcttctgt
ttggaccaccagcagtgcgtgtgcctcatctgcagagatgcacaaatccactctggccac
aagttctgttccctcgatgagattgtgcaagagcatagagagaaattccagaaatcgttg
caaaaagtgaaggaaaacctggcagagttcactgagatccaaaacaactgcagtgaacaa
gcagagtacatcaaggtccagaaggacctggttgaaagcaagattaagaagaactttgag
gagcttcgccagtttctggaggtggaggagcaggccaaattggctgctctgagggaggaa
gagcagaagaagagtcacatgatgaaggagaagatggaggctctcaacagagacatggcc
acactctccgacatcattagtagcacagaaaagtgggtggcctctgaccacgtttccttt
atgaacaactaccaggtcgcaatgaccacggtccaacagttgcctgacaagcccgtgctg
cccccaggagctctgctggatgaagtcaaacatctgggcaacctcaagttcaccgtgtgg
ttccgaatgaaggagacggtgtcctacagtcctgtgattctggacccaaacacagcctca
ccgcatttcaatctgtctgaagatttgaccagtgtgaattttaacggcgaaaagcggtgc
ccaatgaatccagagcggtgtcagtactggaaccgtgtcctcggttgcgctttggacccg
ggaacacacatctgggatgtcgaggtgggagacaacagggactggctagtgggggttgtg
gggggggactctcgtttgccacatagctcctttgtatggggcattaagtttaatgatgac
aaataccaaattttgtcactaccgtatccagccaagaatctgagggtcaaagtgaaagtg
cagagggtccgggttcgtgtagacaccgacacgagatccctttcattctcggagtctcat
acaaacactgaattatacacgcgcaaccacattcccaattggccaaatttgtctggtaac
gccacaatgtatccttacttttacactaataatgataaagggcctctgaaaataataccg
cttacgttttgcgttatgacccaaaatcccaaataa
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