Syngnathoides biaculeatus (alligator pipefish): 133512929
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Entry
133512929 CDS
T09681
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04137
Mitophagy - animal
sbia04140
Autophagy - animal
sbia04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133512929 (hif1aa)
04137 Mitophagy - animal
133512929 (hif1aa)
04148 Efferocytosis
133512929 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133512929 (hif1aa)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
133512929 (hif1aa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
133512929
NCBI-ProteinID:
XP_061699003
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Position
15:13256387..13277118
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AA seq
758 aa
AA seq
DB search
MDTGIVPEKKSRVSSERRKEKSRDAARCRRGKESEVFYELAEQLPLPHSVSSSLDKASVM
RLTISYLRMRKLLGPDELKAEEESDLDTQLTSSYLKALEGFLMVLSEDGDMIYLSENVNK
CLGLAQFDLTGHSVFDFTHPCDQEELREMLVHRTGTKKAKEPNTERSFFLRMKCTLTSRG
RTVNVKSATWKVLHCAGHVRLHGGLNKQTSEDHKEPRVPYLVLICDPIPHPSNIEVPLDA
KTFLSRHTMDMKFTYCDERITELLGYDPEDLLDRSVYEYYHALDSDHLTKTHHNLFAKGQ
VCTGQYRMLAKRGGFVWVDTQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLILSLEQTED
VKPVKEEQQEDEKVVVESCSVEKSPTLLKKNDKEEEKATELDVIKLFTQTPEPKPVTSLY
EQLKEEPEALTLLAPAAGDTIISLDFSSPDSDIQLLKDVPLYNDVMLPATSEKLALPLSP
LPPSEPISVDVAAVNGESENYAGSTAASTTSHSAAEVPPPPDFCLTMEPDISDFKLDLVE
KLFAIDTQHKTPFTTQTMEDLDLEMLAPYIPMDDDFQLRSVSPEQPLSCGSVKSLQNSPV
HATQDLYNYLRLPVNTPSGGTTSPAPPEPVSAPPSSPVFIKRTSQLDKELSLRTLSAQNA
HRKRKLDDMQESDGQDNLSMENVEKGKKLKAELATIQTVLLLPSDLATCLLGSTSEATRS
LLNLPQLTRYDCEVNAPLQGRQCLLQGEELLRALDHAN
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtacctgaaaagaaaagcagggtgagctcggagcggaggaaggag
aagtcaagggatgcggcgagatgtcggcgcgggaaggagtcggaagtgttttacgaactc
gccgaacagctgccgctgcctcacagtgtcagctccagcttagacaaggcgtccgtcatg
aggctcaccatcagctacctacgcatgaggaaattgcttggccctgatgagctcaaagca
gaggaagaaagcgacttggacacacagttgaccagctcctatttaaaagctctggagggc
tttctcatggtgttgtcagaagatggcgatatgatttatctctctgagaatgttaacaaa
tgccttggcctggcacagtttgacttgactggacatagcgtgtttgacttcacgcacccc
tgtgaccaggaggagctgagagagatgctggtccacagaacaggcaccaaaaaggcaaag
gaaccaaacacagagcgcagcttcttccttcgaatgaagtgcacgctcactagccggggc
cgcactgtcaatgtcaagtctgctacatggaaggtgctccactgcgctggccatgtgcgc
ttacacggtggcctcaacaagcagacctccgaggaccacaaggagccacgggttccttat
ctggtgctgatctgtgatcctattccacacccttccaacattgaggtccctctggatgcc
aagacgtttctcagtcgccacacaatggatatgaaattcacatattgtgatgagagaatc
actgagcttttgggatatgatccagaggatcttttggatcgttctgtgtacgagtactac
catgctctcgactcggaccacctcaccaagactcatcacaacttatttgcaaaaggccag
gtttgtacaggccaataccggatgctggccaagagaggagggtttgtgtgggtggataca
caagcaactgtcatctacaataacaagaactctcagccacaatgtgtggtctgtgtcaac
tttgttctcagcggcatccaggaggagaaactgatcttgtctctggagcagacggaagat
gtgaagcctgtaaaagaggagcaacaggaagatgaaaaagttgttgtagagagttgctca
gtggagaagtcaccaactctgctgaaaaagaatgacaaagaggaggagaaggccacagag
ctggatgtcatcaagctgtttacacaaacgcctgagccgaagccagtgaccagcttgtat
gagcagctaaaagaagagccagaggcccttactctgctggctccagcagctggagacaca
atcatctccttggactttagctcccctgattctgacattcagctcctgaaagacgtgcct
ctctacaatgacgtgatgcttcccgccaccagtgaaaagctggcattgcctctttcccct
ctgccgcccagtgagcccatcagtgttgatgtcgccgccgtgaatggggaaagtgaaaac
tatgctggatccacagccgcgtcaacaacaagccacagcgcagcagaggttcctccgcct
ccggatttttgcttaaccatggagccggacatctctgacttcaaactagacttggtggag
aagctttttgccattgatacacaacacaagaccccctttactacacagacaatggaggac
ttggacctggagatgttggctccctacatccccatggatgacgacttccagctgcgcagt
gtgagtcctgaacagccgctgtcctgcggatctgtcaaatccctccagaactcgcctgtc
cacgccacgcaggatctctataactatctccgcctgcccgtcaatacgccaagtggtggc
accacctccccggcaccacccgagccagtttctgctcccccttcttcccctgtcttcatt
aagagaacgtcacaattggacaaggaactgtccctccgcaccctatcagctcaaaatgca
caccgcaagagaaaactggatgacatgcaagaaagtgatggccaggacaatttgtccatg
gaaaatgtggaaaaagggaagaaactaaaggctgagttggccacaatccaaactgtactt
ctgctgccttcagatttggcaacttgcctcttgggcagcacatccgaggccaccagatcc
ctcttgaacctgccgcagctcacccgctacgactgtgaggtcaacgcccctctgcagggc
cgccaatgtcttctgcagggggaggagctcctgcgtgcattggaccacgccaactga
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