Syngnathoides biaculeatus (alligator pipefish): 133512990
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Entry
133512990 CDS
T09681
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133512990 (stxbp5b)
Membrane trafficking [BR:
sbia04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133512990 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
133512990 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40
Beta-prop_HPS5
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
EIF3I
Lgl_C
Synaptobrevin
Beta-prop_VPS8
Beta-prop_Vps41
WD40_like
Motif
Other DBs
NCBI-GeneID:
133512990
NCBI-ProteinID:
XP_061699127
LinkDB
All DBs
Position
15:complement(22274321..22307591)
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AA seq
1195 aa
AA seq
DB search
MKKFNIRKVLDGLTAVSSSSSSSAAQTGAAKENDAVPESLQSEHFQLCKTVRHGFPHQPS
SMAFDPVQKILAVGTLNGALRLFGRAGVECYCQHESGAAVIQLQFLINEGAVVSALADDS
IHLWNLRQKIPAVLHSLKFNRERITYCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVI
MWNKAIELSTKTHPGPVVHISDNPMDEGKLLIGFECGVVVLWDLKSKKADYRYNYDEAIH
SVAWHHEGKQFVCSHSDGTLTTWNIRTPAKPAQITTPHGKQPKDGKKPEPCKPILKVEYK
TTRAGDPFMVLSGGLSYDTVGRRACLTVMHGKSTAVLEMDFPIVDFLTLCETPYPNDFQE
PYAVVVLLERDLIVIDLGQIGYPIFETPYPLSIHESPVTCCEYFADCPAELIPALYSVGT
RQKRQGYSKKDWPVSGGNWGQGTQSYPEIIITGHADGSIKFWDASALMLQVLYKLKTAKV
FERARGKDEKANTDIVDEDPFAIQTLCWCPESRMLCVAGVSAHVIVYRFSKQEITTADVQ
LLEVRMQCDPSNLDSPDAAGDQTPTQSSPVLPSPQETEPPATASGQPSAVGNTSSSSADG
LRDNMPCLKVRVSPLKQSPGYQVELVVQLVWVSGEPPQQITSLAINSSYGLVVFGNTNGL
AVVDYLQKTLLLNLGTSELHSPSEPIQRQPCSPRKARHPSGALCDSSDGPNTAEERCKSP
NSGSNSPCNSDDERKAKFIEKVKYKSRRFSKTVANDFARMSRKISSSSEQKPNSDWGTIS
SRKHFYHTHNGTSKTTRKSVKLAFPPRNSDHNMNSKDNLFSRSRSSSVTSIDRESREAIC
AFCFCETFPRKLADASPGPCLLVGTTHGAVMLLSLSVPSGDQQRLLQSVEISSSGMVTKL
KGGILTLGLLDAAGAALPAPYEAWYDPNASDEEKEKEKSRWRRPASPPSSHDGHDSQFAV
LCSEKQAKVLAMPSQTRVYKHSITESSFVLRADVVEMAGVNCIACFCANGHIMMLSLPSL
RPLLDVNYLPLTDMRIARTFCFSNLGQALYLTSPTEVQRITYSQDTCDNLQEMLSELFTP
VETPEAPNRGFFKGLFGGGAQSLDREDLFGETGSGKASRTLAQHIPGPGNMEGMKGAASG
VVGDLARARIALDERGQKLGELEERTAAMMASADSFSKHAHDMMLKYKDKKWYQL
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattcaacattcgcaaggtgctggacggcttgacggcggtctcctcctcctcg
tcgtcgtcggccgcgcagacgggggccgccaaggagaacgacgccgtcccggagagcctg
cagtcggagcatttccagctttgcaagactgtgcgtcatggtttcccacatcagccgtcc
tccatggccttcgaccccgtgcagaagatattggctgtcggcacgctgaacggagctttg
aggctcttcggccgtgcaggtgtggagtgctactgtcaacacgagagtggcgccgccgtc
atccagctccagttcctcatcaacgagggcgcggtagtgagtgccttagctgatgacagc
atccacctgtggaacttgaggcaaaagatccccgccgtcctgcattcgctcaagttcaac
agggagagaatcacatactgccacctgcccttccaaagcaaatggctttacatcggcacg
gaaaggggcaacatccacatcgtcaacgtggagtccttcaccctctcaggctacgtcatc
atgtggaacaaagccatcgaactatccaccaagacacacccagggccagtagttcacatc
agtgataaccccatggacgaaggaaagctcctcattggatttgagtgcggcgtggtggtg
ttgtgggacctgaagtccaaaaaagctgactatcgctacaattatgatgaggccatccac
tcggtagcgtggcaccacgagggcaaacagtttgtctgcagccactcagacggcactctg
accacatggaacatacgaaccccggccaagccggcgcagatcaccacaccgcacggaaag
cagcccaaagatggcaagaagccagagccgtgcaagcccatcctgaaggtggaatacaaa
accacacgggcaggggacccatttatggttctgtccggcggtctgtcctacgacacggtg
ggtcggagagcctgtctgacagtgatgcacgggaagagcaccgccgtcctggagatggac
ttccccatcgtggatttcctcaccctgtgcgagacgccgtatcccaacgattttcaggag
ccatatgccgtggtggttctcctggagagggatttaatcgtcattgacctaggacagatt
gggtacccgatattcgagaccccctaccccctaagcatccacgagtcccccgtgacctgc
tgcgagtactttgccgactgcccggccgaactcattcccgcactttactcggtggggacc
cgacagaaaaggcaaggctacagcaagaaggactggcccgtcagtgggggaaactggggc
caagggacgcaaagttacccagagatcatcattactgggcacgccgacggctccatcaag
ttttgggatgcttctgcactgatgcttcaagtgttgtataagttgaagacggccaaggtg
ttcgagagggcccgcggcaaggacgagaaggccaacacggacatcgtggacgaggatccc
tttgccatccagacgctgtgctggtgccccgagagcaggatgttgtgcgtggccggcgtg
tcggcgcacgtcatcgtctaccgcttcagcaagcaggaaatcaccaccgccgacgtgcag
ctcttggaagtacgcatgcagtgcgacccgagcaatttggactcgcctgatgccgccggg
gaccaaacccccacacagtcttccccggtgctccccagcccccaggagaccgagcccccg
gccaccgcctccggtcagccctccgccgtcggaaacaccagcagctcttcggcggacggg
ctgcgagacaacatgccgtgtctgaaggtccgcgtctccccactgaagcagtctccgggg
taccaggtggagctggtggtccagctggtgtgggtgagcggggagccacctcagcagatc
actagcttggccataaactcctcttatggactggtggtgttcggcaacaccaatggcctg
gcggtggtggactacctccagaaaacgctgctgctcaacctgggcacgtcagagctgcac
agcccatccgagcccatccagaggcagccttgctccccgcgcaaagcccgccacccgtct
ggagcgctgtgcgattccagtgatgggcccaacactgcagaggagcgctgcaagtcgccc
aactcaggatccaactcgccctgcaattctgatgacgagcgcaaggccaagttcatagaa
aaggtgaagtacaaaagcagacgcttttccaagacggttgccaatgactttgctaggatg
tcgcggaaaattagctcgtctagtgagcaaaagcccaactccgactggggcaccatctca
tcccgaaagcacttttatcacacccacaatggcacgtccaagaccacccgcaagagcgtg
aagttggctttccccccaagaaactctgaccacaacatgaattccaaggacaacttgttc
agccgctcgcgcagttccagcgtgaccagcatcgacagggagtcccgcgaggccatctgc
gccttctgcttctgcgagactttccccaggaagttggcggacgcctcgcccggcccatgc
ctgctggtgggcaccacccacggcgccgtcatgttgctgtccctcagcgtgccctccggt
gaccagcagaggctcctgcagtcggtcgagatctcctcctctggcatggtgaccaaactc
aaaggaggcatcttgacgttgggcctgttggacgcggccggagccgcgctgcccgccccc
tacgaggcctggtacgatcccaacgcctccgacgaggagaaagagaaggagaagagccgg
tggcgcaggccggcgtcgccgccctcgtcgcacgacggccacgactcgcagttcgccgtc
ctgtgctcggagaagcaggccaaggtgctggccatgccgtcgcagacgcgcgtctacaaa
cacagcatcaccgagtcgtccttcgtgctgagggccgacgtcgtggagatggcgggggtc
aactgcatcgcctgcttctgcgccaacggacacatcatgatgctcagcttgccgagcctg
cggcccctcctggacgtcaactacctgccgctgacggacatgcggatagcgcggacgttc
tgcttctccaatctgggccaggctctgtatctcacctcccccacggaggtgcagaggatc
acttacagccaggatacctgcgacaacctccaggagatgctgagtgagttgttcacacca
gttgagacccccgaggcccccaacagaggtttcttcaaaggcctctttggtgggggagct
cagtccctggatcgggaagatctcttcggcgaaacggggtccgggaaggcctcccgcacc
ctggcccagcacatccccggcccgggcaacatggagggcatgaagggcgcggcgtcgggc
gtggtgggcgacctggcccgcgcgcggatcgcgctggacgagcgagggcagaagctcggc
gagctggaggagaggacggccgccatgatggccagcgccgactccttctcgaagcacgct
cacgacatgatgctgaagtacaaagacaagaagtggtaccaactctga
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