Syngnathoides biaculeatus (alligator pipefish): 133512991
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Entry
133512991 CDS
T09681
Name
(RefSeq) DNA mismatch repair protein Mlh3-like isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
133512991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133512991
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
133512991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
133512991
NCBI-ProteinID:
XP_061699138
LinkDB
All DBs
Position
15:complement(16954884..16971362)
Genome browser
AA seq
1076 aa
AA seq
DB search
MIKCLSEEVRVKLRSGAGVPSLQQCVEELLLNSLDAGATCVGVRMDLGGFKVHVIDNGVG
ISAEDMECVGNRYHTSKCHSLGDLDELSCYGFRGEAIANIVALATLVEISSRARNTGRTM
VRMFTNGKGMGVFEKDTCRPTAGTTVAVCNFFHNLPVRRKRMDLVLESERIRHRVEAISL
MHPSVSFTLKNDCTGAMMVQLPKARDTYHRFIQIHSLARAQKLGEIQHTCAQFEVTGYLG
REGHYNGSLQFVYVNGRLLLRTRIHSLLNSLLRRLSSPTQRTDSLEKQSAVRSPKQKRSQ
DLHGIYIINIKCPYSEYDISLEPAKTLIEFKDWDGVLLCVEEAIKAFLCRENLVLSPHES
QEASPRLIKVDVAPQENSRADQSIGTASICAPTLASQSVYRKREVRVESSAVESESEEHV
DQTRQVPVDDVAEEEETKFSKAVDLEKEISLSQTTGNVNFHKTVNPATLVPRDVGREENS
FRKIRVSCPFIHDCLQVASHNTRTQFHQKRPKHKISLDSHHDRVSLRTHGNFSHPVPSNI
PNTVAEECGSLDKFRRIYGKSAETKVTPLESQTRTGLPRLNVVEDPQNCVISQNQQLKSD
VKEPQGGPQNSAALSGYTKLKHTSAKQSLAGKLKHLKQNATPPSCPSREKSNQKSSDEVF
QDSENNETVTSAEPVAEVATEPPTDWLHHFDTEVGKTVYVNKVTGLSKYQEPPTEETKAR
CTSDVTNMAVSVVSETGMEYRCYPFQAGLVLPFLPKAGRERVLSAGTDDTGESVKITNSL
SSLYSNWHNPVFVRPPEVGIDISSGQADGLVVKIHNILFPYRFSKGMIQSMKVINQVDNK
FLACLMNTTDDTDSEGNLVVLLDQHAAHERVRLENLIADSFEDDPNAPGERRLCSSTILP
PLHICVTEEDQRLLRSCQTHLRSLGLEVTFSQGQNDEVLVGKVPVCFVEKENNELRRKRP
SVVKRVVEDYLQEQMELLRSTGRMKGTLPLTVLKVLASLACHGAIKFNDRLNRDECRSLV
ASLSSCQLPFQCAHGRPSIAPLVDVVHLEPNQKEPQKPNLGKLRRLYKAWVLYGNR
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatgtctgtcggaagaggttcgggtgaaacttcgctccggtgccggcgtcccg
tccctccaacaatgcgtcgaggagctccttctcaacagcctcgacgcaggggcgacgtgt
gtgggcgtccggatggatctgggggggttcaaggtgcacgtgatcgacaacggcgtcggt
atcagcgcggaggacatggagtgcgtggggaacagataccacaccagcaaatgtcactca
ctgggcgacctggacgagctcagctgctacggcttcagaggtgaggccatagcgaatatc
gttgctctcgccacgcttgtagaaatctcatcgcgagccagaaacacgggcaggacgatg
gttaggatgttcacaaatggcaaggggatgggcgtgttcgaaaaagacacttgtcgaccc
actgccggcaccacggtcgccgtctgtaacttcttccacaacttgcccgtgcgcaggaag
aggatggacctggtcctggaaagtgagaggatcagacaccgggtggaggccatatctcta
atgcacccctctgtatccttcaccttgaagaatgactgcacgggagccatgatggtgcag
ctccccaaggccagagacacttatcacaggttcatccagatccacagcctggcccgagct
cagaaactgggagagatccagcacacgtgtgcccagtttgaggtgacgggttaccttggc
agagagggccactacaacggtagcttgcagtttgtgtatgtaaatggaagactgctccta
aggacgcgcatacactcgctgttgaactcccttctacggaggcttagcagtccaactcag
aggaccgacagcttagaaaaacagtctgccgtcaggagccccaagcagaaacgcagccaa
gaccttcacggaatatacataattaatatcaagtgtccttattcagagtatgatattagt
cttgagcctgccaaaaccctaatcgagttcaaagactgggatggtgttttgctgtgcgta
gaagaagccataaaagctttcctgtgcagggagaacttggtgctctccccacatgagtcg
caggaagcgtcgccaaggttgattaaagtcgacgtggctccccaagaaaacagcagggct
gatcagagtatcggtacagcctccatttgtgcaccgacactggcatcgcaatcggtttat
cgtaagcgtgaggttcgcgtcgaatccagtgcggttgaatctgaaagcgaagaacatgtt
gatcagactcggcaggttcctgtcgacgacgtcgcagaagaggaggaaaccaaatttagt
aaagctgtagacttggaaaaagagatcagtttatcacaaacaactgggaatgtcaatttt
cacaaaactgtcaatccagcaactcttgttccccgggatgtcgggagggaagaaaattct
ttcagaaagatccgtgtctcttgtccgttcatccacgactgtctgcaggtcgcttcccac
aacaccaggacccaatttcatcagaagcgtccaaagcacaaaatctcccttgactcacac
cacgatagagtgtcgctgagaacacacggaaacttttcccaccctgtcccctcaaacatt
cccaacactgtagccgaggaatgcgggtcacttgacaagttcagaagaatttatggaaaa
tctgcggagacgaaggtcactccgctggagagtcagacccgcactgggctacctcgatta
aacgttgtggaggatccccagaattgtgttatttcccagaaccagcaactgaaaagtgat
gtcaaagagccccaaggtggcccccaaaactcagctgctctttcggggtacaccaaacta
aaacacacttcagccaaacaatctttagcaggtaaacttaagcacctaaaacaaaacgca
acaccacctagttgtccttctcgagaaaaatcaaatcaaaaatcaagcgacgaagtcttt
caagacagcgagaacaatgagacggttactagtgccgaacctgttgcagaggtggcgacc
gaaccacctacggactggctgcatcatttcgataccgaagtgggaaaaaccgtgtacgtc
aacaaagtgaccgggctcagcaaataccaggaaccgccgacagaagaaactaaggcccgc
tgcacatctgatgtcaccaacatggccgtcagtgtcgtctctgaaacagggatggagtac
aggtgttacccattccaggcagggctagtgctgcccttcctgccgaaagctggaagggaa
agagtgcttagtgcagggacagatgacacaggtgaaagtgtcaagatcaccaactcactc
tcatctttgtactcaaactggcacaaccctgtgtttgttcgtcctcctgaggtgggtata
gacatctcaagtgggcaagctgatgggctggttgtaaagatccacaacatcctgtttcct
taccgcttctccaaaggcatgatacagtctatgaaggtgatcaatcaagttgataacaag
ttccttgcgtgccttatgaatacaactgatgatacagacagtgaagggaacctcgtggta
ctgttggaccaacatgctgcacatgaaagagtccgtcttgaaaacctaatagcagattcc
tttgaggacgatccaaatgcacccggtgagagacgtctgtgttcatccactattttgccg
cctctgcacatctgtgtgacagaagaggaccaaaggctgctcaggtcttgtcagactcat
ttgcggagcttgggcctggaagtgacgttctcgcaggggcagaatgacgaggtgctcgtc
gggaaggtgcccgtttgttttgtggaaaaggaaaataacgagcttcggcggaagaggccg
tctgtcgtcaagcgtgttgttgaggattaccttcaagagcagatggagttactgcgctct
accggtcgaatgaaaggaactctaccactcacagtgctgaaagtcctcgcctctctcgcg
tgccacggcgccatcaaattcaacgaccgcctgaatcgagacgagtgtcgcagcttggtg
gcgtctttgtcgtcctgccagttgcccttccagtgtgcccacggtcgcccgtccatcgcg
ccgctcgtcgatgtcgtccatttggagcccaaccaaaaggaaccccagaaaccaaacctt
ggaaagttaagaagattgtacaaagcatgggtgctatatgggaataggtaa
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