KEGG   Syngnathoides biaculeatus (alligator pipefish): 133513032
Entry
133513032         CDS       T09681                                 
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    133513032 (wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sbia03009]
    133513032 (wdr43)
Ribosome biogenesis [BR:sbia03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    133513032 (wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_THOC3 WD40_Prp19 Utp12 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_VPS8 Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_IP5PC_F NBCH_WD40 Paf1 SGL Tricorn_2nd PAN2_N
Other DBs
NCBI-GeneID: 133513032
NCBI-ProteinID: XP_061699251
LinkDB
Position
15:complement(7470419..7500823)
AA seq 721 aa
MNYSCRERCCNCVKAFSHWVSTLGVLEPILAIIELEGSQSADDSHCACAKASTRGWRKPR
TQTRALSEMADGESMYSLPLPCVFSPKSQQYLAVCAQDGRLRIWNTDSKTLHQEYVPSAH
LSATSTCIHWGPCRTAKEGPQRKRRKSEAGQLEGKADLLAMGTVAGTVLIYSTAKGALHC
TLDGGHSGGVNCVHWHPEDSLLYSGSDDTHIVEWDLQTGKTRSKWKADRAAVTSLCVSPD
GKLLLSAGQTIKMWDLETKEVYRKFTGHATAVTTLRFATTRPPDSSGLYFLSGAAHDRLL
SVWQVREGGKDKNSVVSFTVTDEPQHIDLVSSKSKEQAVRLAVVCKDGQLHLFEHFLNGP
CKKPLTPSCTVQMSDTKDSPMPIPLLAAALGSESRTVMLAYGNYLQPVMERVDINTADRH
VCLTRNAQTTLSLSIASTISKVRTPIVNAKSKVLVPGLPGHQAPVKGSMATEKRKKDSDS
KEISIAERLGEIHLQSTASTEKGAPKGMPSLQTDNYAVLLVQGLESSDSSILNKLFQTRK
DMIIKKTVACLPLPAVLPLVEEITKRLQGHPFTAVLMVRWLKAVLMHHTSYLSSLPDLVS
QLGVLYHMIESRVKIFHKLTKLHGKLYLLVTQVATNTCSNKVSDVDHTAKLVYEEESSDE
DEASGDEGLLDEDSDNWEEEEELMEDDKKEQIEQNEDLDSRTDSKANGEEPMEHDNESEE
E
NT seq 2166 nt   +upstreamnt  +downstreamnt
atgaattattcctgcagagagcggtgttgcaactgcgtgaaagccttttcacactgggtc
tcaactctcggagtgctggagcctatcctagctatcatcgagctggaggggagccaatca
gcagacgatagtcactgcgcatgtgcaaaagcatccacacgtggttggcgtaaaccacgc
acgcagactcgagcgctttcagaaatggcggacggggagagtatgtattcgctcccgcta
ccttgcgttttttcaccaaaatcacaacagtacctggcagtgtgtgctcaggatggaaga
cttcgaatttggaacacagacagcaaaacacttcaccaggaatacgtgccttcagctcat
ttgagtgccacttctacgtgcatacattggggaccatgccggacagcgaaggagggtcct
cagagaaagaggaggaaatcagaagcagggcagctggagggaaaggcggacctattggcg
atggggacggtggcaggcacagtgctcatttacagtacagctaaaggagctctgcactgt
accctggatggaggtcatagtggaggagtgaattgtgttcattggcaccctgaagactct
ttattgtatagtggctcagatgatacacacattgtagaatgggacctgcagacaggcaaa
acacggagtaagtggaaggcagaccgtgctgcagtgaccagtttgtgtgtgagcccagat
ggtaaactattgctttcagctggacagactatcaagatgtgggacttggaaaccaaagag
gtttacaggaaattcactggccatgccacagctgtgacgacccttcgttttgccaccacg
cgaccccctgacagcagtggtctctatttcttgtctggcgctgctcacgatcgactgctc
agtgtatggcaagtacgagaaggtggcaaggacaagaactcggtagtgtcatttaccgtg
actgatgagcctcaacatattgaccttgtctcatccaaaagcaaggaacaggcggtgagg
ctagcagtggtgtgtaaagatggacaactgcatctctttgagcacttcttgaatgggccc
tgcaagaagcccctgacaccttcatgcacagtgcagatgtcagacacaaaggattcccca
atgccaatccccctccttgcagctgccctgggttctgagtcccggactgtgatgctggct
tatgggaactatctacagcctgtaatggagagagtggatatcaacacagctgatagacat
gtttgtctgacacggaatgcacagacgacattgtccctttccatcgcgtccaccatttcc
aaggtgagaaccccaattgtcaatgcaaagagcaaagtgctggttcctgggcttcctggt
catcaagccccagttaagggatcaatggcaacagagaaaaggaagaaagactctgactcc
aaagagatatcgatagcggagcgtcttggtgaaattcatctgcagtctacagcttccaca
gaaaaaggagctcctaaagggatgccctctctccaaactgacaattatgcagtgttgctg
gtgcaaggccttgagagcagtgacagtagcatcctaaataaactttttcagactcgtaaa
gacatgataataaagaaaacggttgcttgtctgccactccctgctgttttaccgttggta
gaagagattaccaagaggctccaagggcacccttttacggcagttctgatggtccggtgg
ctcaaagcagtgctaatgcaccacacttcgtacctgtcttcgctgcctgacctggtttcc
cagctaggagtcctttatcacatgattgagagcagagtgaagatattccacaaactaacc
aaattacatggaaagctttacctccttgttacacaggtggcgacaaatacttgcagcaac
aaagtatctgatgttgaccacacagccaagttggtgtatgaagaggaatcttcagatgaa
gatgaggcatctggggatgaaggtcttctggacgaagactctgataattgggaggaggag
gaggagttgatggaggatgacaagaaagagcaaatagagcagaatgaagatctcgacagc
aggactgattccaaagcgaatggggaggaacccatggagcatgataatgagagtgaagaa
gaatga

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