Syngnathoides biaculeatus (alligator pipefish): 133513112
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Entry
133513112 CDS
T09681
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04814
Motor proteins
sbia05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
133513112 (dctn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133513112 (dctn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133513112 (dctn1b)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133513112 (dctn1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133513112 (dctn1b)
Membrane trafficking [BR:
sbia04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
133513112 (dctn1b)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
133513112 (dctn1b)
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
133513112 (dctn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
ATG17_like
Gemin7
Motif
Other DBs
NCBI-GeneID:
133513112
NCBI-ProteinID:
XP_061699483
LinkDB
All DBs
Position
15:24621789..24647220
Genome browser
AA seq
1234 aa
AA seq
DB search
MSSDGGGSRPPKVGSMVEVIGKGHRGRVAFVGTTLFASGKWVGVILDEAKGKNDGTVQGK
RYFTCQDGHGMFVRQSQIQVVDDGADTTSPETPELGGAKVPKRDISDTSKSTKLRGVKPK
KTPTPRKQPSRPAGSGGKGPASGSASTGEMSSSEASTPAQTPLAAPIIPTLHSPGNPPPP
VPTKEEEALRAQVKDLEEKLETLKVKRTEDKAKLKELEKHKIQLEQLQEWRSKMQEQQAE
LQKQLKEAKREAKEALEAKEHYMEEMSDTADAVEMATLDKEMAEERAESLQLEVDSMKEK
VEELTVDLEILKHEIEEKGSDGAASSYHVKQLEEQNGRLKEALVRMRDLSSSEKQEHSKL
QKQMEKKNVELDALRANKEKLQEEMAAADKTVDELKEQVDAALGAEEMVETLTERNLDLE
EKVRELRETVTDLEAINEMNDELQENARETELELREMLDLSAARVREADKRVEAAQETVA
DYQQTIKKYRELTAHLQEVNRELTSQQEASAELQQQQQQQQQPAETFDFKIKFAETKAHA
KAMEMELRKMEVSQANRHVSLLTSFMPESFLRHGGDHDCILVLLLIPRLVCKAELISKQA
QEKFDLNETSAEPRGLRGSAGERLSFAGGLVYSLSLLQATLRKYDQALSRCDVDVYKKIG
SLYSEMSVHERSLDFLIELLHKDQLDETVNVEALTRAIKYYQQLYGVHLADQSEDCTLQL
ADHIRFTQSALDCVSVEAGRLRVFLHAGQEKSDLAALLHDLETSCGDVRQFCKKIRRRMP
GTDAPGIPAALSFGPQVSETLRECRKHLTLAVALLQEVAAAAAQMMSPLAENEGLPAAKL
EDVAFKAGEQIYGRPGANPYECLRQSCGVVIATMNKMATAMQEGEYDSERPRAKDSPPVE
LRAAALRAEMTDAEGLGMKLEDRETVIKELKKSLKIKGEELSEASVRLSLLEKKLDSSSK
DADERVEKIQTRLDEAQNLLKKKEKDFEETMDALQADIDQLEAEKAELKQRVGAVGAGQA
KMAGDGPRGGAAPACASCASGVQVVDSPLLTRQLEAQRLCIKQLKNQNNWLQAEKMREQL
AALPPLRVAKLPSTAGGPAPLSGALYRKTDQLLETLLQMSANVKVVDISGKSPVTPGAQL
LEQTARLQSLRDTLDRLKDEVAAHVLERRAGARAPSDFAAFPAAAFVKAEEEKRGGDCVL
AGRVMVPCPRGQERVHRLLLTQGQLRHVHSLLLT
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggacggcggcgggtcgcggccccccaaggtgggctcaatggtggaggtgatc
ggcaagggccaccggggcagggtggccttcgtcggcaccaccctcttcgcctcgggcaag
tgggtcggcgtcatcctggacgaggctaagggcaagaacgacggcaccgtgcaggggaag
cgctacttcacctgccaggacggccacggcatgtttgtcagacagtcgcagatccaagtg
gtggacgacggcgccgacaccacgtccccggagacgcccgagctcggcggcgccaaggtg
cccaagcgagacatctcggacacgtccaagtccaccaaactgcgaggagtcaagcccaaa
aagactccgactcctcgaaagcagccgagccggcccgcgggctccggcggcaagggtccg
gcctccggctcggcttcgaccggcgagatgagcagcagcgaggccagcacgcccgcccag
accccgctggccgccccgatcatccccaccttacactcgcccgggaaccccccgccgccc
gtgcccaccaaggaggaggaggctctgcgtgctcaggtgaaggacctggaggagaagctg
gagacgctgaaggtgaagcgcaccgaggacaaggccaagctgaaggagctggagaagcac
aagatccagctggagcagctgcaggagtggcggagcaagatgcaggagcagcaggccgag
ctgcagaagcaactcaaggaggccaaacgggaggccaaggaggccctggaggccaaggag
cactacatggaggagatgtcggacacggcggacgccgtcgagatggccacgctggacaag
gagatggccgaggagcgcgccgagtccctgcagctggaggtggactccatgaaggagaag
gtggaggagctcaccgtggacctggagatcctcaagcacgagattgaggaaaaaggttct
gacggcgccgcgtccagctatcacgtcaaacagctggaggagcaaaacgggaggctgaag
gaagcgctggtcaggatgcgagatctgtcctcatcggagaagcaagaacactcgaagctg
cagaagcagatggagaagaagaacgtggagttggacgcgttgagagccaacaaggagaag
ctgcaagaggaaatggcggcggccgacaagaccgtcgacgagctgaaggagcaggtggat
gcggccttgggggccgaggagatggtggagaccctgacggagaggaacttggacctggag
gagaaagtgcgcgagctcagggagaccgtcaccgacctggaggccatcaacgagatgaac
gacgagctgcaggagaacgcccgcgagacggagctggagctgcgggagatgctggacctg
agcgcggcccgggtccgagaggccgacaagcgggtggaggcggcgcaggagacggtggcc
gactaccagcagaccatcaagaagtaccgcgagctcaccgctcacctgcaggaagtgaac
cgggagctgaccagccagcaggaagcgtcggccgagctccagcagcagcagcagcagcag
cagcagcccgccgagacctttgacttcaagatcaagttcgctgagacaaaggcgcacgca
aaggccatggagatggagctgaggaagatggaggtgagccaggccaacagacacgtttcc
ctgctcacctccttcatgcccgagtccttcctgcgccacggcggcgaccacgactgcatc
ctggtgctgctgctcatccccagactcgtctgcaaggcggagctgataagcaagcaagcg
caggagaagttcgacctgaacgagacgagcgccgagccgagggggctgaggggttccgcg
ggcgagcggctgagcttcgccgggggtctggtctactcgctgagcctcctgcaggccacc
ctccgcaaatacgaccaggcgctgtcccgctgcgacgtggacgtgtacaagaagatcggc
tcgctgtactcggagatgagcgtccacgagcgctcgctggacttcctgatcgagctgctc
cacaaggaccagctggacgagaccgtcaacgtggaggcgctcaccagggccatcaagtac
taccagcaactgtacggcgttcatctggcggaccagagcgaggattgcaccctccagctg
gccgaccacatccggttcacgcagagcgcactggactgcgtgtcggtggaggcgggccgc
ctgcgggtcttcctgcacgccggccaggagaagtccgacctggccgcgctgctgcatgac
ttggagacttcctgcggagacgtgcggcagttctgcaagaagattcggcgccgcatgccc
ggcaccgacgcgccgggcatcccggcggcgctcagcttcgggccccaggtgtcggagacg
ctgcgcgagtgccgcaagcacctgacgctggcggtggcgctgctgcaggaggtcgcggcg
gccgcggcgcagatgatgtcgccgctggccgagaacgaggggctgccggccgccaagctg
gaggacgtcgcctttaaggcgggagagcagatttacgggcgaccgggcgccaacccgtac
gagtgtttgcgtcagtcgtgcggcgtcgtcatagcgaccatgaacaagatggccaccgcc
atgcaggagggcgagtacgactccgagcggcctcgcgccaaggactcgcctcccgtggag
ctgcgggcggcggctcttcgtgcggaaatgacggacgccgaaggtttggggatgaagctg
gaggacagggagacggtcatcaaggagctcaagaagtcgctcaagattaagggcgaagaa
ttgagcgaggccagcgtgcgtctgagcctgctggagaagaaactggacagctcgtccaaa
gacgccgacgagcgcgtggagaagatccagacccgcttggacgaagctcagaacctcctc
aagaagaaagagaaggacttcgaggagacgatggacgcgctgcaggccgacatcgaccag
ttggaggccgagaaggccgagctcaagcagcgcgtcggggccgtcggcgccggacaggcc
aagatggccggcgacggcccgcgaggaggcgcagcgccagcgtgcgcttcgtgcgcgtcg
ggcgtccaagtggtggactcgccgctgttgacgcgccagctggaagctcagcgcctttgc
atcaagcagctcaagaaccaaaacaactggctccaggcggagaagatgcgcgagcagctg
gcggcgctgcccccgctgcgcgtggccaagctgccgtcgacggccggcggccccgcgccg
ctctctggcgccctctacaggaagacggaccagctgctggagacgttgctgcagatgagc
gccaacgtcaaagtggtggacatcagcggaaagtcgcccgtgactcccggcgctcaactt
ctggagcagacggcccgcttgcagtcgctgcgggacacgctggaccgactcaaggacgag
gtggccgcgcacgtcctggagcggcgagccggcgctcgggcgccgtcggacttcgccgcc
tttcccgccgccgccttcgtcaaggcggaggaggagaagcgcggcggcgactgcgttctg
gcgggccgcgtgatggtgccgtgtcctcggggccaggagcgcgtccaccgcctgctcctg
acgcaaggccaactgcgccacgtccacagcctcctcctcacctga
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