Syngnathoides biaculeatus (alligator pipefish): 133513162
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Entry
133513162 CDS
T09681
Symbol
thbs3a
Name
(RefSeq) thrombospondin-3a isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04145
Phagosome
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133513162 (thbs3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133513162 (thbs3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
133513162 (thbs3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133513162 (thbs3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133513162 (thbs3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133513162 (thbs3a)
00536 Glycosaminoglycan binding proteins [BR:
sbia00536
]
133513162 (thbs3a)
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Phagocytosis
Opsonins
133513162 (thbs3a)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133513162 (thbs3a)
Exosomal proteins of colorectal cancer cells
133513162 (thbs3a)
Exosomal proteins of bladder cancer cells
133513162 (thbs3a)
Glycosaminoglycan binding proteins [BR:
sbia00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133513162 (thbs3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
133513162
NCBI-ProteinID:
XP_061699605
LinkDB
All DBs
Position
15:25798974..25807027
Genome browser
AA seq
952 aa
AA seq
DB search
MEMEMKMRRKITFVLSTILLCAAASAQLPEQQAMDLLSAQDLELADAFWSGAGASGDVFV
AAIIRLPPKAGGVLLGVYRKNDNRKYLEVAVTAKINKVSLRFWRRSDGKVHTVNLANANV
SDGRRHSLVIRLGDLQRDSARAELYADCRLADAAEGVPRPRPLPLEADAVEIRHGQKAYA
RAQGAVESLWLALGGGVAQAGALVDCPFQGDSAHNLASGDLQAILADHAKALIGQMLLFN
QMLGELRQDVKEQVKEMSLLRNTILECQVCGFHQPRSRCSPNPCHPGVACAESPHFPGFV
CGPCPPGTVGNGTRCRDVDECEARPCFSPSACVNTDGGFRCGPCPPGLRGAPLAGTGLRY
AKTHKQECADVDECVELADACVQNSVCTNTEGSFQCGACKAGYLGNQTVGCFPRSSCAAL
TFNPCDAHADCEMGRNGVPSCTCKVGWAGNGNTCSVDTDLDGYPDRSLPCLDNNKHCRQD
NCVSTPNSGQEDADNDGIGDQCDDDADGDGIKNVEDNCRLVSNKDQQNSDSDSFGDACDN
CPNVSNSEQTDTDGNTRGDACDLDIDGDGIPNVLDNCPKVPNPMQTDRDRDGVGDACDSC
PELSNPTQTDVDDDLVGDICDTNHDTDGDGHQDDRDNCPDIPNSSQLDSDNDGRGDDCDP
DDDGDGVPDLRDNCRLIANPHQQDSDLNGVGDVCELDFDNDALWDTLDACPESAEVTLTD
FRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTSFNGVDFEGTFHVNT
VTDDDYAGFVFSYQDSSSFYAVMWKQTQQVYWQTRPFSAVASPALHLKAVKSSTGPGEYL
RNALWHTGDTTGEATLLWKDPRNVGWKDKTSYRWQLSHRPQAGYIRVRLFEGSDAVADSG
VVIDTTLRGGRLGVICFSQENVIWSNLRYRCNDTLPEDFHSHGRQVVMHVRV
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagatgaagatgaggaggaagataacctttgtgctgtcgaccattttgctt
tgcgcggcggcgtcggcgcaacttccagagcagcaagcgatggacctcttgagcgctcag
gacttggagctcgcggacgcgttttggagcggcgccggcgcatcgggtgacgtctttgtg
gcggcgattatccgcctgccgcccaaggcgggcggggtccttctaggcgtgtacaggaag
aacgacaacaggaagtacctggaagtcgccgtcacagccaagatcaacaaagtgtcgctt
cgcttttggcgtcggtcggacgggaaggttcacaccgtcaacctggcgaacgccaacgtg
tcggacgggcgacgccattcgctggtcatccgtctgggcgaccttcagcgtgacagcgcg
agggcggaactctacgcggactgccgattggccgacgcggcggagggcgtgccccgcccc
cgccccctccccctggaagcggacgcggtggagatccggcacggccagaaggcctacgct
cgtgcgcagggtgccgtggagtccctttggttggcgctagggggcggcgtggctcaagcc
ggcgccctggtcgactgtccctttcaaggtgactccgcccacaacttagcgagcggcgac
ctgcaggccatcctggctgaccacgccaaagctctgattggacagatgctcctcttcaac
cagatgctgggggaactaagacaggacgtcaaggagcaggtgaaggagatgtccctgctg
aggaacaccatcttggagtgtcaagtctgcggtttccaccagccgcgctcgcgctgctcg
cccaacccgtgccacccgggcgtcgcctgcgcagagagcccgcacttcccgggcttcgtc
tgcggcccgtgcccccccggcaccgtcgggaacgggacccgctgtcgcgacgtggacgag
tgcgaagcacggccgtgcttcagcccgtcggcctgcgtcaacacggacggcggcttccga
tgcggcccgtgtcctcccggcctgcggggggcgccgctcgccgggaccggactgcgctac
gccaagacgcacaagcaggagtgcgcggacgtcgacgagtgcgtcgagctcgccgacgcg
tgcgtccagaactcggtgtgcaccaacacggagggttcgttccagtgcggcgcctgtaaa
gccggttacctcggcaaccagacagtcggctgcttcccccgcagttcctgcgccgccttg
accttcaacccctgcgacgcccacgctgactgcgagatgggaaggaacggcgtgccgtcc
tgcacgtgcaaggtgggctgggccggcaacggcaacacgtgcagcgtggacacggacctg
gacggctaccccgaccgctcgctgccctgcctggacaacaacaaacactgcagacaggac
aattgcgtgtcgactccaaattcaggtcaggaggacgccgacaacgacggcatcggggat
cagtgcgacgacgacgcggacggagacggcatcaaaaatgtggaggacaactgccgtctg
gtttccaacaaggaccagcagaattccgacagcgactcgttcggcgacgcgtgcgacaac
tgccccaacgtgtccaacagcgagcagaccgacacggacggaaacaccagaggagacgcc
tgcgacctggacatcgacggagacggcattccaaacgtgctggacaactgtccaaaggtt
cccaatcccatgcagacggaccgagatcgcgacggcgtcggggacgcctgtgacagttgc
cccgaactcagcaaccccacacaaactgatgtagacgacgacttagtgggagacatttgt
gacaccaaccacgacacggacggcgacggccaccaggacgaccgcgacaactgtcccgac
attcccaacagttctcagttagactcggacaacgacgggcgaggagacgactgcgacccg
gacgacgacggcgacggcgtcccggacctcagggacaactgcagactcatcgcgaaccct
caccagcaagactcggacttgaacggcgtcggcgacgtgtgcgagttggactttgacaac
gacgcgctttgggacacgctggacgcgtgtcccgagagcgccgaggtgacgctgaccgac
ttccgagcttaccagacggtcgttttggaccccgagggcgacgcccagatcgaccccaac
tgggtggtcctcaatcaggggatggagatcgtccagacgatgaacagcgacccgggcctg
gccgttggctacacgtccttcaacggcgtcgacttcgaaggaactttccacgtgaacacg
gtgacggacgacgactacgccggcttcgtcttctcctaccaggactcgtcgagtttctac
gctgtcatgtggaaacaaacgcagcaggtctattggcagacgcgaccgtttagcgccgtc
gcaagtcccgccctccatctcaaggcggtgaagtcgagcacgggtccgggcgagtatttg
aggaacgctctgtggcacacgggcgacacgacgggcgaagcgacgcttctgtggaaagat
cccaggaacgtcggctggaaggacaaaacgtcgtatcgctggcagctcagccaccgcccg
caagccgggtacatcagggtccgtctgttcgagggctccgacgcggtggccgactccggc
gtggtgattgacaccaccttgagggggggcagactgggggtcatctgcttctcccaggag
aacgtcatctggtccaacctgcgctaccgctgcaacgatacgcttcccgaagacttccac
tcgcacggccggcaggtagtgatgcacgtccgagtgtga
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