Syngnathoides biaculeatus (alligator pipefish): 133513255
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Entry
133513255 CDS
T09681
Symbol
pax1a
Name
(RefSeq) paired box protein Pax-1a isoform X1
KO
K09382
paired box protein 1/9
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133513255 (pax1a)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
133513255 (pax1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_29
HTH_28
Motif
Other DBs
NCBI-GeneID:
133513255
NCBI-ProteinID:
XP_061699841
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All DBs
Position
15:10554772..10559345
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AA seq
439 aa
AA seq
DB search
MTTTATFSVASDLYRNVSATPFFTSKEVGGDLNKSPPDATVSLLQARFRLQIIYNKFIVE
VPSMCVCVCVCVCVCVCVCVWAEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRP
CDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKNIREYKQNDPGIFA
WEIRDRLLADGVCDKYNVPSVSSISRILRNKIGNLSQPSQYEGGKQASAQAGLPYNHIYP
YPYSNTMSPTAAKMGSPPGVPVTPGHVSIARAWPSAHTVSNILGIRAFMDPAAIAGTEGY
PTKMEEWSSVNRAAFPAAHSVNGIDKAAIDADIKYAQPSSTLSSYVSACAYTPTNQYGVY
SGPAGGYVAPGHHHWQPQSPALSHPGSGMSMHAGEIHSPMAFKHHPREGERKPPSPLSKQ
QQHEDLNCVHGLSLPTSSS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaacagcgacgttttctgtcgcgagtgatctctatagaaatgtttcagcaacg
ccatttttcacgagcaaagaagttggaggtgatttaaataaatcccctcccgacgctact
gtttcgttgttgcaagcacgtttccgactccaaataatttacaacaaattcatcgttgaa
gtgccttctatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgggcagagcaaacctatggagaggtcaaccaactgggcggcgtgttcgtcaacggaaga
cccctgcccaacgccattcggctgagaatcgtggagctggcccagctcgggatcagaccc
tgcgacatcagccggcaactgcgcgtctcgcacggctgcgtcagcaagatcctagcgcgc
tacaacgagaccggctccattttaccgggcgccatcggcgggagcaaaccccgcgtcacg
acgcccaacgtggtgaaaaacatcagggaatacaaacagaacgaccccgggatctttgcc
tgggaaatccgagacagactattggcggacggggtttgcgataagtacaacgtgccctcg
gtaagctccatcagcaggattttacgcaacaagattgggaatctgtcccagcccagccag
tacgaaggtggcaagcaagcctcggcgcaggccggcctcccttacaaccacatttatccg
tacccctactccaacaccatgtcccccaccgccgccaaaatgggctcccctccaggggtc
ccggtgacgccgggccatgtcagcatcgccagggcctggccctctgcgcacaccgtcagc
aacatcctgggaattcgagccttcatggaccccgcagccattgctgggacggaggggtac
ccgaccaaaatggaggagtggagcagcgtcaatcgagcagctttccctgcagctcactcg
gtcaacggcatcgacaaagcagccattgatgctgacatcaaatacgcgcagccctcctcc
acactgtccagttatgtctcggcgtgcgcgtacacccctacaaaccagtacggggtgtac
agcgggccagcgggcggctacgtggccccgggtcaccaccactggcagccgcagagcccg
gccctgtcccacccgggcagcgggatgagcatgcacgctggggagatccactctcccatg
gccttcaagcaccacccccgagaaggagaaagaaaaccccccagtccgctaagcaagcag
cagcagcatgaagacttgaactgtgtgcatggactcagtctccctacctcatcatcataa
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