Syngnathoides biaculeatus (alligator pipefish): 133513343
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Entry
133513343 CDS
T09681
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133513343 (rtn1a)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133513343 (rtn1a)
Membrane trafficking [BR:
sbia04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
133513343 (rtn1a)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133513343 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
DUF4736
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
133513343
NCBI-ProteinID:
XP_061700026
LinkDB
All DBs
Position
15:complement(12982177..13005627)
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AA seq
725 aa
AA seq
DB search
MSAQSGEELGEEAKWFGDDYGRVFVGNAEAEAATRRDELRDQVKPSGAQAADDLEPQFHP
YQDDGKRHAVAMETASTGDPMSDLFRKLANDGDVYTSLLSNQSISSGQESSYLSDNVKAS
SGSPGLDHFSTDMYTFTSSTKTMSNDMPKSLMGSEKTESYNYMDIRHADDRLDQQQGALD
SLVDTGLTGSEPLGSYIDKNLGREEEDEEDENLGPALGSHSFPYVEEPSDEEPSDYRSYR
NLGGTPQSASPVKITLTESQAPAPKAEPQQRPAPATGCDHENVLSVGLQGVPTVTLSEPE
DESPASTPNASPTQKEFPSHEVFKADTVKSAATKYSPGPKVGGRDQDGSSAESGDSEIEL
VSEDSPKGNRNPFAEPPKSKGTFNQSSSPFDSPPVVSKVGSGLAGNHAQPAAYSILREER
EAELDSDLFIESASEESPKREQGVGSPNLGAGRPSPLVPSVPTDRSVPQAASVEPSVTEK
VKAEEERLSKPKPPTATVPPEVRPERFNLDDKKANEGKADLGKSAPSFLLEALNKQKAID
LLYWRNMKQSGAVFSSVLLLLFSLTQFSVVSVGAYLALAALSATISFRIYKSVLQAVQKT
DEGHPFKGYLEMEISLTQDQISKYADKILLYTNTCMRELRRLFLVQDLIDSFKFAVLMWL
LTYVGALFNGLTLVILAVVSMFTMPVVYEKHQAQIDQYVGLIRTHVNSVVGKIQAKIPGA
KRKEE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcagtccggcgaggagctcggcgaggaggccaagtggttcggcgacgactac
ggccgggttttcgtcggcaacgcggaggcggaggcggcgacgcgccgagacgaactgcgc
gaccaagtgaagccgagtggcgctcaggccgccgacgatctggagccacaatttcatccg
taccaggacgacgggaaaaggcacgcagttgctatggaaactgcatctacaggtgaccca
atgtcagacctgttcaggaagcttgcgaatgatggtgacgtgtacacctccttgctgtcc
aatcagagcatttcatcaggtcaagaatcttcctatctgtctgacaatgtaaaggcttca
tctgggtcccccggcctggaccacttctccactgacatgtacaccttcacctcgagcacc
aagaccatgtccaacgacatgcccaagtctttgatgggctcagaaaagacagaatcctac
aactacatggacataaggcatgcagatgatcgcctggaccaacagcagggggcactggac
agcctggtagacacaggattgaccggtagtgagccactaggtagttacattgacaagaac
ctgggaagagaagaggaagacgaagaagatgagaatctaggtccagccctgggctcccac
tcctttccttacgtggaggagccgtctgacgaggagccgtctgactaccgctcctaccgg
aacctgggaggcacgccgcagtcagccagcccagttaagatcaccctgaccgagtcgcag
gctccggcacccaaggccgagcctcagcagcgccccgctccagccactgggtgtgatcat
gaaaatgtgctgagtgtgggcctgcagggggtgcccactgtgacactgtcagaaccagag
gatgagagccccgcctcaacccccaatgcttcacctacacaaaaagagttcccctcccat
gaagtcttcaaggctgacacagtgaagtctgccgccaccaaatatagtccaggcccaaag
gtcggtggcagggaccaagatgggagcagtgcagagtctggagactccgagattgagctt
gtgtctgaggattctcccaagggcaacaggaacccgtttgctgaaccaccgaaaagcaag
ggcaccttcaaccagtccagcagtccctttgacagccccccggtagtttccaaggttggt
tccggcctggccggcaaccacgcccagcctgcagcctacagcattctgcgtgaggagaga
gaggcggagctcgacagtgacctcttcattgagtctgcatcagaagaaagtcccaaaaga
gagcagggagtggggagccccaatctcggagccggacggccctcccccctcgttccgagt
gtccctactgaccgcagtgtccctcaagctgcatcagtagagccttccgtcacagaaaag
gtcaaagcagaggaagaacgcctgagcaagcccaagcccccgacagccaccgtgccccca
gaagtgcgtccagagaggttcaatctggacgacaagaaggccaatgaaggcaaagcggat
cttgggaaatcagctccttccttcctcctggaagctttgaacaaacagaaagcgattgac
ctgctctactggaggaatatgaagcagtcaggggccgtgttcagcagcgtgctgcttctc
ctcttctccctgacccagttcagcgtggtcagtgttggggcctacttagccctggccgcc
ctctctgccaccatcagcttccgtatctacaaatctgtgctccaggctgtgcagaaaacg
gatgagggccatccttttaaaggctacctggagatggaaatctccctaacccaggaccaa
attagcaaatatgctgacaaaatcctgctctacaccaacacctgcatgagggagcttcgc
aggcttttccttgtccaagatctgattgactctttcaagtttgctgtgctgatgtggctt
ctaacctatgtgggcgctctcttcaacggcctgacactggtcatcctagctgtggtctct
atgttcaccatgcccgtggtctatgagaagcatcaggcacagatagatcaatatgtggga
ctaatacggacccatgtcaactcagtggtgggaaagatccaagcaaagatccccggggcc
aagaggaaggaggagtag
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