Syngnathoides biaculeatus (alligator pipefish): 133513497
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Entry
133513497 CDS
T09681
Symbol
ddx24
Name
(RefSeq) ATP-dependent RNA helicase DDX24
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbia03009
]
133513497 (ddx24)
Enzymes [BR:
sbia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133513497 (ddx24)
Ribosome biogenesis [BR:
sbia03009
]
Eukaryotic type
Pre-60S particles
Helicases
133513497 (ddx24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Serpin
Josephin
DEAD
Helicase_C
UIM
SUIM_assoc
UIM_2
Motif
Other DBs
NCBI-GeneID:
133513497
NCBI-ProteinID:
XP_061700341
LinkDB
All DBs
Position
15:12568455..12586938
Genome browser
AA seq
1526 aa
AA seq
DB search
MDVIFHEKQEGSLCAQHCLNNLLQGEYFTPVDLSSIAHQLDEEERMRMAEGGMGSDEYRT
FLQQPSGNMDDSGFFSIQVISNALRVWGLELILFNSREYQSLMINPINEKAFICNYKEHW
FTIRKLGQQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVRGNLPDCEAEQILGI
MRVQQQQRPKLIGEDQAQMSAGRLATLGQTEMSFNVESDVIDEDEELKRALALSKQDIDV
EDEEADLRRAIQLSMQGAVLTNTSSDSGSAHVRVDSKPGGELRAHNETLTADELRKRRQA
YFDRQQHPVQSNIPQQANTTSIGFVPHHSQTQISVAYKLKMGFVFLLMCLIAPVQQSPLP
YTSVLNLSFKNVEFAMDLYRKISTYHDENIIFSPLSISTSFAALSMASDGATYKEIMKGL
NLETLEQADQPDLIPNLFQMLHGNISHNGATKLDQAMSLFVRQHFSIEKTFEEQMKSYFY
ADINSVNFEDTNASISLINQYIKDKTRGKVEKMLSGLDPTTELMMINTFYFQGGWKMPFN
RNYTYNAPFYVDNYNIRQVPMMFKEDKFETMEDTRLGARVLKLPYLEGVSMLILLPNKGV
DYNTIDDEINAKRMHGWIKKLQKTKLEITIPKFKMEKSYSLHDILPELGFTSLFSGSANL
TRLSKDKGLKVSEVSLDTLFATSLDFEPFCLVSGAEHFEKMNTSKTKKKGKFFAPGKRKK
LTIQEKGQWKAVDLDPELFSEEGLVCFEKLTNYCLVDSNKLATNAENDLKGRKKKGKKRK
SSEDEVVEKGDVDSKQSEKIAKPAKKKKKKDISDNKPPQHETVEVMQKEHDEEMETDQED
RSKGALSTASLDQPKIKKTKKKKKLQKEKCKEEQHNASQDNVTRPKKVQKNWTNSTLSGS
KVKNADMGAWKDLFVPPVVMKALSSLGFTSPTPIQALVLPPAIRDRMDILGAAETGSGKT
LAFGIPMIHNILQWKETADNTDPNTSHGSLTEPPEADMGSSEEQDEEEGSMADGDESGDE
DDHDTEHLDQDGRLGCVEVIDDADITAGDLKGAIDRARPLLGLVLTPTRELAVQVKHHID
AVAKFTDIKTAVVVGGMAQQKQRRILNRQPEILIATPGRLWDLIKEKHPHLLNLRQLMTL
VIDEADRMVERGHFAELESVLEMLNTTQFNPKRQKLVFSATLTMTHSLPMRLVSKKKVQQ
TDKVALLMEKVGIKSKPKVIDLTRKEATVETLTETQIHCQKEEKDFFLYYFLLQYPGRTM
VFANSIECIKRLNLLLVILDCTPLPLHANMHQKQRLKNLERFAERESCVLLTTDVAARGL
DIPNVQHVIHYQVPRTSETYIHRSGRTARATKEGLSLLLIGPDDMLNFKKIYRNLGKNEE
LPVFPVESHYMEAIKERVNLARKIEKIEFYNSRQKHHNSWLRQAAEDMDIELDQSLLLGN
QRDEEDDQRQQKMVKEMKKQLKYLISQPMYKSMTKTKYPTQMGRLCLAHLPIVGKQSALM
SVSEQRQKKKTGPPQHKKGKQKKYRR
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcattttccacgagaaacaagagggctctctctgcgcccagcactgcctcaac
aacctgctgcagggtgagtacttcaccccggtggatctctcctctattgcacatcagttg
gacgaggaggagaggatgagaatggcagagggaggaatgggtagtgacgagtacaggacc
tttttacagcaaccatctggaaacatggatgacagtgggttcttttcaatacaagttatt
agcaatgctctgagagtttggggactggagcttatactcttcaacagccgggagtaccag
agcctgatgataaatccaataaatgaaaaagccttcatatgcaattacaaggagcactgg
tttacgattcgcaaacttggacaacagtggtttaacttgaattcacttttgactggacca
gagttgatctcggacacgtatttagcccttttccttgcacagctacagcaagagggttat
tccatatttgtggtccgaggaaatctcccagactgtgaagcagagcagattcttgggatc
atgagagtccaacagcaacagaggcctaaacttattggcgaggaccaagctcagatgagc
gcaggcagattggcaacattgggccagacagagatgagcttcaatgtggagagtgacgtc
atagatgaagatgaagagctgaagagagctctggcgctcagcaaacaggacattgatgta
gaagatgaggaagccgatctccggagggccattcagcttagcatgcaaggagccgtgttg
acaaacacttcttcagattctggtagtgcacatgtgcgagtggacagcaagcctggaggg
gaactccgagcccacaatgagacactcacagcagacgaactaaggaagaggaggcaggcc
tactttgaccggcagcagcaccctgtccagtcgaacattcctcaacaagccaacacaaca
tcaataggttttgtaccccaccattcccagacccaaatatcggtcgcatacaagctgaag
atgggctttgttttcttgctcatgtgcctcatcgctccggtgcagcaatcgccgcttccc
tacaccagcgttttgaatctgtcgttcaaaaatgtagagtttgctatggacctttaccgc
aaaatatccacttaccatgacgagaacatcattttctcgcctctaagcatttccaccagt
tttgccgccctttctatggcctctgacggtgccacgtacaaggagataatgaaaggactc
aacctggagactttggagcaagccgaccagccggatcttattccaaacttgttccagatg
ctccatgggaacatctcgcataatggagccactaaactggaccaagccatgtccctcttt
gttcgccagcactttagcattgagaagacatttgaggaacagatgaagtcctatttttat
gcagacatcaacagtgtaaactttgaagacacaaatgcaagcatcagtctcattaatcag
tacataaaagacaagacaaggggaaaagtggaaaaaatgctctccggccttgacccaacg
accgagctcatgatgatcaacactttctatttccaaggtgggtggaagatgcctttcaac
cgcaactacacctacaacgcacccttctacgttgacaactacaatatccggcaagtacca
atgatgtttaaagaggacaagtttgaaacgatggaagacacccgtcttggggcccgtgtg
ctgaaactgccctacctggagggtgtgtccatgctcatcttgctgcccaacaaaggagtg
gactacaatactatcgatgatgagatcaatgcaaagaggatgcatggttggatcaaaaaa
ctgcagaagactaaactggagatcaccatccccaaattcaagatggagaagtcatactct
ttgcacgacattctcccagagttgggtttcaccagtctcttcagcgggtcagccaatctg
acgaggcttagcaaagacaaaggccttaaagtttcagaggtcagtcttgacacgttgttt
gctacatcgcttgattttgagcctttttgtcttgtgtctggtgccgagcattttgagaaa
atgaacacatcgaagacaaaaaagaagggaaagttcttcgcgcctggcaaacggaagaaa
ttgaccattcaagaaaagggccaatggaaggcggtcgacttggatcccgaactcttctcc
gaggagggtctcgtttgttttgaaaaactgacgaattactgcctagtagactccaacaag
cttgcaaccaatgcagagaacgaccttaagggaagaaagaaaaaaggaaagaaaaggaag
tccagcgaagatgaggtggtcgaaaagggagacgtcgatagcaagcagtcagaaaagatt
gccaaacctgccaagaaaaagaaaaaaaaagacatatcagataataaaccgccccaacat
gagactgtggaggtgatgcagaaagaacatgatgaggaaatggaaaccgatcaagaggac
aggtccaaaggtgcactgtccactgccagcttagatcaaccaaaaattaagaagactaaa
aagaaaaagaagctgcaaaaagaaaagtgcaaagaggaacaacacaatgcaagtcaagat
aacgtgacaaggcccaaaaaagtacaaaaaaactggactaattctaccctttctggttct
aaagtaaaaaatgcagacatgggtgcatggaaagacctgtttgtcccaccagtagtgatg
aaggccctcagcagccttggcttcacatcaccgacaccaattcaggccctggtgctgcct
cctgccatccgagatcgcatggatatactaggggcggctgagacgggaagtgggaagaca
ttagcttttgggattcccatgatccataacatcctgcagtggaaggaaactgctgacaac
actgatccaaacacatcgcatggaagcttgacagagccccctgaagctgatatgggcagt
tctgaggagcaggacgaggaagaaggaagtatggctgacggagatgaatctggggatgag
gatgaccacgacactgaacatctagatcaagatgggaggcttgggtgcgtggaggtcatc
gatgatgccgacatcactgcaggagatttgaaaggtgctatcgatcgggctcgccctctg
cttggactggtcctcacgccgaccagggagttggcagtccaggttaaacaccacattgat
gctgtagccaagttcactgacatcaaaacagccgtagtggtgggtgggatggcacaacag
aagcagaggaggatattgaatcgccagcctgaaatcctcatcgccacgccaggacgtttg
tgggacttgatcaaggagaaacatccgcatcttctcaacctcagacagctcatgaccctg
gtgatcgacgaagctgaccgcatggtcgaacgaggccactttgcggagctggagtctgtg
ttggagatgctgaacaccactcagttcaatcccaagaggcaaaaattagtcttctctgcc
acgctgaccatgacccatagcctacccatgcgcttggtgtcaaagaagaaggtgcagcag
accgacaaggtggcgctcctcatggagaaagtggggatcaagtccaagcccaaagtgatc
gacctgacgaggaaggaggcgacggtggagaccttgaccgagacgcagattcactgtcag
aaagaggagaaggacttcttcctctactacttcctgctgcagtatcccgggcgcaccatg
gtgttcgccaacagcattgagtgcatcaagcggctcaacttgctgctggtcatcctggac
tgcacgccgctcccgctgcacgccaacatgcaccagaagcagcgtctgaaaaacctggag
aggtttgctgagagggagagttgtgtgttgcttacaactgacgtggcagcaagagggctg
gatatacccaatgtgcagcatgtcattcactaccaggttccccgcacgtctgagacgtac
atccatcgtagcggcaggacagcgagagctacaaaagagggtctcagtttgctgctcatc
ggccccgacgacatgttgaacttcaaaaagatttacaggaatcttggaaagaatgaggag
cttccagtatttcctgtagagagccactacatggaggcaattaaggagcgtgtaaacttg
gccaggaagattgagaagattgagttctacaacagcaggcaaaaacatcacaactcttgg
ttgaggcaagctgcagaggatatggacatcgagctagaccaaagcctcttgctaggcaac
cagagggacgaggaggatgatcagaggcaacagaagatggtgaaagagatgaaaaaacaa
ttgaagtatctcatctcccagcccatgtacaagagtatgaccaagaccaagtaccccact
cagatgggacgtctgtgcctggctcacctgcctatcgtggggaagcaaagtgccctcatg
agtgtctcggagcagcggcagaaaaagaaaactggcccaccgcagcacaaaaaagggaag
cagaaaaaataccgccgctaa
DBGET
integrated database retrieval system
