Syngnathoides biaculeatus (alligator pipefish): 133513506
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Entry
133513506 CDS
T09681
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133513506 (msh4)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Meiosis-specific proteins
Others
133513506 (msh4)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
AAA_23
Med31
Motif
Other DBs
NCBI-GeneID:
133513506
NCBI-ProteinID:
XP_061700348
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All DBs
Position
15:13698928..13709431
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AA seq
910 aa
AA seq
DB search
MFRSSTEEIVSSDTLESGHSSDVSPSETSLVNENTSYNHSCQSLVGESTHSSTGPSLPRT
AAGNFPDSLQLGRTNPLRLVCTSDSSYHRRTPSLRRIPGSARATHPTRTPLTDRTAATSC
SSSTTASGASVVVSLVEGRGLARGEIGMASVNLKCPELILSQFADTGTYAKVITKVHILL
PMEILMPDTACDQGKGTKLFTLITENFQGVAFNAIQRKYFNEKKGLEYIQQLCAPEFSTV
LMEVQAKYYCLAAAAALLKYLEFIQNSVYAAKSLKVSFKGSEQTAMIDSSSASNMELVVN
NRDHRSDHTLLGVLNHTKTPGGARRLRANILEPLVDVHTINIRLDTIQELLQNQELFFGL
KNAIGHFLDIDQLLSLLVQVPKHETVQVAEAKITHIIQLKHTLDLVPQLRVVLKNCNTAL
LKAYSTSLEDNRFDVIVKQILTVINDDTAYLKGSLNMRTQKCYAVRPNINEFLDIARRAY
TEIVDDIAGLVNQMSENYGFPMRTSFSTARGFFIQMKLEGMYLPEGKLPSEFIKVTKHKD
NYGFTTTDLMKLNDRCDEALREIIHMSYVVVCQLLNTIREHVHCLYKLSDAVSMLDMLLS
LANVCTLSNYVRPEFTDTLAIKQGRHPVLEQMPGQQFVSNDCYVSEGSNFVCITGPNMSG
KSTYLKQVALCQIMAQIGSFIPAEYASFRIADQIFTRIGIDDDFETNSSTFMVEMKEVSY
IIHNVSEQSLIIIDELGRGTSAEEGIGICHSVCEFLLSLKAFTLFATHYLELCQLESLYP
NVDNQHMQVQHTRTRDTGTENIVYTHSLAQGLSEDRHYGLRAAEMTSLPSSIIQEAKTIA
SKVSRHLLAKRQSDPETERHRALYRLATRLLQTARNSRLDPDSLRMYVKGLRQQYEADLE
ATGLPASTDT
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtagcagcactgaggagatcgtgagtagtgatactttagaaagtggacatagc
tctgacgtgtctccatctgaaacaagtctagttaatgaaaacacttcttataatcactcc
tgtcaaagtttggttggagagagtactcactccagcactggtccatcacttcctcgcaca
gccgcaggtaatttccctgatagccttcagttaggaaggaccaatccactccgccttgtc
tgcacctcagacagctcttaccatcgaagaacaccaagcctcaggagaatccccggttct
gcaagagccacacaccctacacgaaccccgttgactgatcgtactgcagctacaagttgc
tcctcatctaccacagcttctggtgcatctgtagttgtatccctggttgaaggccgtggt
ttggccaggggagagattggaatggccagtgttaacttgaaatgtccagagcttatattg
tctcagtttgcagacactggaacgtatgctaaggttataaccaaggtccatatcttgttg
ccgatggagatactgatgccagacactgcttgtgatcagggtaaagggacaaagctcttt
actctcatcacagagaacttccagggtgttgctttcaatgcaattcaaaggaaatatttt
aatgagaagaaaggactggagtacatccaacagctctgtgctccagagtttagcactgtc
ctgatggaagttcaagcaaagtattattgccttgcagctgcagctgctttgctgaaatat
ttagagttcattcagaactctgtgtatgctgccaagtcgcttaaagtgagctttaaagga
agcgaacagacggctatgatcgactcatcatctgccagtaacatggaattggtggtcaac
aatagagaccacaggagcgaccatacccttttaggcgtccttaaccacacgaaaaccccc
ggtggcgccagaaggttacgtgccaatattctggagcctctggtggatgtgcatactata
aatatacgcttggatacgatacaagagttgctgcagaatcaggagctcttctttggattg
aagaatgcgataggtcatttccttgacattgaccagctgctgtctcttctggtccaggtt
ccaaaacacgagacagttcaggttgctgaagcaaagattacacacatcattcaattgaaa
cacactttggatcttgtgccacagttgagggtggtgttgaagaactgcaacacagctctt
cttaaagcatacagcacttcattagaggataacagatttgatgtgatcgtgaagcagatc
ctcaccgtgattaatgacgacaccgcctatttgaaggggagcctgaacatgcgcacgcag
aagtgctacgccgtgcgaccaaacatcaatgagttcctggatattgcccgacgagcttat
acagagatagtggatgacattgcaggactagtaaaccagatgtcagagaactatggattt
cccatgcgcacaagcttcagcactgcacgaggtttctttatccagatgaagctggaagga
atgtacttgcctgaggggaaacttccttcagagttcatcaaggtcaccaaacacaaagac
aactatggcttcaccaccacggatctgatgaagctgaatgaccgctgtgatgaggcccta
agggagatcattcatatgtcctatgtggtggtatgtcaacttctgaacactatccgtgaa
catgtccattgcctctacaaactgtcggatgctgtatcgatgctggacatgctcctgtcg
ctggcaaacgtatgcaccctctctaactatgtgcgaccagagttcacagacacactagct
atcaaacagggtcgtcaccccgtcctggaacaaatgcccggacagcaattcgtatccaac
gactgttatgtgtctgaggggagcaactttgtctgcatcacaggacccaacatgagtggg
aaatccacatatctcaaacaagtagcactgtgtcagatcatggctcaaataggttctttc
atccctgctgagtatgcttctttccgtatcgcagatcagattttcaccagaattggcatt
gatgatgattttgaaactaactcttctacatttatggtggaaatgaaggaggtgtcatac
ataatccacaatgttagcgaacagtccctcataatcatagatgaactgggacgtggtacc
agtgctgaggaaggcattgggatatgtcactcggtgtgtgagtttctcctcagcctcaag
gccttcaccctatttgccacacactaccttgagctgtgccaactagaatctctgtatccc
aatgtggacaaccaacacatgcaggttcagcacacacgcactcgtgacacaggcactgag
aacatagtatacactcactcactggcccaaggactttctgaagacagacactatggcctc
agagcagctgaaatgacatcacttccttcaagcataatacaggaagcaaagacaattgcc
tccaaagtcagcaggcatcttttggccaagcgtcaaagtgatccagaaacagagaggcac
cgcgctttataccgcttggccacccgcctccttcagactgccagaaactccagacttgac
ccggacagcctacgcatgtatgtgaagggactaagacagcagtatgaggcagatctagaa
gctacagggctgccagcatccacagatacctga
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