Syngnathoides biaculeatus (alligator pipefish): 133513697
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Entry
133513697 CDS
T09681
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133513697
Membrane trafficking [BR:
sbia04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
133513697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
133513697
NCBI-ProteinID:
XP_061700674
LinkDB
All DBs
Position
15:complement(25710038..25721172)
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AA seq
1475 aa
AA seq
DB search
MRKRGRRVPPETNASVYLSCLSTNKKGIEEIVSQSQSRDYANARLRPDFLSCGEQSGGGR
AGGMSEDKCPQLVDYFVVAGLDPAGPRRPLDDDARTAGGPGRGAEPVTDVAVIARGLGEE
VPQGFTCIDKSLGGHSAELSAGLINNPRLYLCYRRGRDKPPLLDLGVLYEGKERPKAGWY
VIETTPYSRSASLSSGAGPAAHRVFLTYRRAPDARGLRSLGVTDIGVLLPGKGEAAPHTF
SRVDKNLNTGMWGPAVFVCYKRAVAKANALVYEAGLLSRYPADDLDSFPLPDSVPVFCLP
MGVTLECWPVDAKYQLPVFSTFVLTSASGDKVYGAAIQFYEAFPREALSERQSLRLGLLS
VVDRRPIPDRGLQAKKSICVLSHWPFFHVFQKFLTFIYRYSVSGPHVLPLEKHISSFMHN
VPFPSPQRPRILVQLSPNDNLLLCQPVSSPLPLSGASFLKLLQNLGPGNACTLLLAVLTE
HKVLLHSLRPDVLTAVSEALVSMTFPLRWLCPYIPLCPLQMAEVLLAPVPFIVGVHSSYF
DSYDPPADVVCVDLDTNAVFQSDDRKPLSWRSLPRKPGKTLFNTLSELHKTLEQICSPGQ
EEATLEFLLTDFDQMYRRQKQLELDIQEAFLRFMSCLLRGYRAFLLPITQAPSATATDCS
SLFNLQGFLKSRERTQLKFFGQLTRTQMFTQFIEECSFVSDRHACLEFFDECVQKVDAEK
PEDVRLVDVDESLCGERTVFIMPPEQPTRDDGSECPARYSYDTFPALRAELFDRPLDRLS
VPAKGGAPGSPAPRRTKQELKVAQRRAQKCCGSPELWCKCLLGHVYGLWFTYLPTFVRAQ
SAKVPALHAAYDVLKRMESRKVLLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITP
NTITYGYYNKAVLESKWPSTNRSGRLLWAKLRNAVLAVALFRRPLKLRAATEERGPRPRL
PLIRQASWSGLSESSSHESLTGSLAKSSSLSSIKTPAQPANASNRKSGRHDRLSAKPPSA
APATPPSGVPVRRSDICLSSFYADDNEDEDDGGYDAAGRAAGERDDRVPPPGRSLAGRLQ
RLLTPTRQRAGARRAASAEERRLGASEQRRSRVAETLPAKERLANANSESSLSPASDADS
ADGPRPARDSWDVGRDGAGIEVSMSSCSRCRSCGFLVYDEEIMAGWTPDDSDLNSRCPFC
GAPFVPFLNANIRDLRPLGGDAEGETADEGRTAPPPCDGDEAATDDGAAAVAVAYVSPLV
LRKELESLLDHEGEAVLGQPQFLESHCIIFWNLLWFFQRLSLPSHLLQLLPLLAEPAQRE
GARVRVRLLWDTLSPDPDSWPPLYVLWRLHSGVPVPRFRRRRRNHPFTLSFLEEVLRCVG
MNEVHKAVTLFLDTVRKTQHASAPPLRRSVYREFLFLTLAAMGNDHAAAFDKKYKAAYSR
LSGVVGKEELRRNRAQPPGAKALDCRRGFRPPLQC
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaacgtggtcgacgagtccccccagaaactaatgcgtccgtttatttgtcgtgt
ttgagcacaaacaaaaaaggaatcgaggagattgtcagccaatcacaatcacgtgactat
gcaaatgcgcggctaaggcccgacttcctgtcgtgcggcgagcagagcggaggcggacgc
gccggcggcatgagcgaggacaagtgcccgcagctggtggactacttcgtggtggcgggt
ctggaccccgccgggccccggcgaccgctggacgacgacgccaggacggccggcgggccg
ggccggggggcggagccggtgacggacgtggcggtgatcgcccgcggcctgggcgaggaa
gtgccccagggcttcacgtgcatcgacaagtcgctgggcggccactcggccgagctgagc
gccggcctgatcaacaacccgcgcctctacctctgctaccggaggggtcgcgacaagccg
cccctgctcgacctcggggtgctgtacgagggcaaggagcggcccaaggcgggctggtac
gtgatcgagaccacgccctacagccgctcggccagcttgagctccggcgccggcccggcg
gcgcaccgcgtcttcctgacgtaccggcgagctccggacgcgcggggcctgcgctcgctg
ggcgtgaccgacatcggcgtgctgctgccgggcaagggcgaggcggcgccgcacaccttc
agccgcgtggacaagaacctcaacacgggcatgtggggtcctgccgtgttcgtgtgctac
aagcgtgcggtggccaaagccaacgcgctggtctacgaagccggtctgctgagccgctac
cccgccgacgacctggactccttcccgctgcccgactcggtgcccgtcttctgcctgccc
atgggcgtgactctggagtgctggcccgtcgacgccaagtaccagctgcccgtcttctcc
accttcgtgctcacctcggccagcggggacaaggtgtacggcgccgccatccagttctac
gaggccttccccagggaggctctgtcagagcgccagagcttgcgtctgggcctgctcagc
gtggtggaccgccggcccatcccggaccgcggcctgcaggccaaaaagagcatctgcgtg
ctctcgcactggcccttcttccacgtcttccagaagtttctcaccttcatctaccgatac
tccgtgtccggaccgcacgtgctgccgctcgagaagcacatctccagcttcatgcacaac
gtccccttcccgtccccccagcgacctcgcatcctggttcagctttctcccaacgacaac
cttcttctgtgccagcccgtgtcgtcgccgctgccgctcagcggcgccagcttcctgaag
ctcctccagaacttgggtccgggcaacgcgtgcacgctgctgctggccgtgctgacggag
cataaagttctgctgcattcgctgcgtcccgacgtcctgacggcggtcagcgaggcgctg
gtctctatgacgttcccgctgcgctggctgtgcccgtacatcccgctgtgcccgctccag
atggccgaagtgctgctggcgcccgtgcccttcatcgtgggcgtgcactccagctacttc
gactcgtacgacccccccgccgacgtggtctgcgtcgacctggacaccaacgccgtcttc
cagtcggacgacaggaagccgttgtcgtggcgctcgttaccccggaaacccggcaagacc
ctcttcaacacgctgagcgagctgcacaagaccctggagcagatttgctctccgggccag
gaggaggcgacgctggagttcctgctgacggacttcgaccagatgtaccgtcgccagaag
cagctggagctggacatccaggaggctttcctgcgcttcatgagctgcctgctgcgaggc
taccgcgccttcctgctgcccatcacgcaggcgccctcggccaccgccaccgactgcagc
tccctcttcaacctgcagggcttcctgaagtctcgcgagcgcacccagctgaagttcttc
gggcagctgacgcgcacgcagatgttcacgcagttcatcgaggagtgctccttcgtcagc
gaccgccacgcctgcctggagttcttcgacgagtgcgtccaaaaggtggacgcggagaag
ccggaggacgtccgtctggtggacgtggacgagagtctctgcggcgagcgcacagttttc
atcatgccgcctgagcagcccactcgagacgacggatccgagtgtcccgcccgctacagc
tacgacacgttcccggccttgagggcggagcttttcgacaggccgctggaccgactgagc
gtccccgccaagggcggcgccccgggcagccccgcccccaggcgcaccaaacaggagctg
aaggtggcgcagcggcgggcgcagaagtgctgcggctcgcccgagctgtggtgcaagtgc
ctgctgggtcacgtgtacggcttgtggttcacctacctgcccaccttcgtgcgggcgcag
agcgccaaggtgcccgccctacacgccgcctacgacgtcctcaagcgcatggagagccgg
aaggttctgctgcccgacgaggtgtgttacaggatcctgatgcagttgtgcggccagtac
gggcagcccgtgctcgccgtgcgcgtccttctggagatgaagaaggcgggcatcacgccc
aacaccatcacgtacggctactacaacaaggcggtgctggagagcaaatggccgtcgacc
aatcggagcggacgcttgctttgggccaagctgaggaacgcggtgctggccgtcgccctc
ttcaggcggcccctcaaactgcgagccgcgacggaggagcgcgggccccgcccccggctg
cctctgattcgtcaggccagctggagcggcctcagcgagagctccagtcacgaatctctg
acgggctcgttggccaagagcagcagcctcagcagcatcaagacgcccgcgcaaccggcc
aacgccagtaacaggaagtcggggcgccacgaccgcctgtccgctaagcccccctcggct
gcgcccgcgacgcccccgagcggcgtcccggtccgtcgcagcgacatctgcttgtccagc
ttctacgcggacgacaacgaagacgaggacgacggaggatacgacgcggcgggaagagcg
gcgggcgagcgcgacgacagagtgccgccgcccggccggagcctggcggggaggctgcag
cgactcctgacgcccacgcggcagcgggcgggcgctcgccgcgcggccagcgcggaggag
cgccgactcggagcttcggagcagcgacggtctcgggtggcggaaacgctgccggccaaa
gaacgcctcgccaacgccaactcggagagctcgctgtcgccggccagcgacgcggactcg
gcggacgggccccgaccggcgagggactcctgggacgtcggccgagacggggccgggatc
gaggtttccatgtcgagctgctcgcggtgccgctcgtgcggcttcctggtgtacgacgag
gaaatcatggccgggtggacgcccgacgactccgacctcaactcccgctgccccttctgc
ggcgcccccttcgtcccctttctcaacgccaacatccgcgacctccgacccctcggcggg
gacgccgagggcgagacggccgacgaagggcggacggcgcctccgccgtgtgacggcgac
gaagccgccactgacgacggcgcagccgcggtggcggtggcgtacgtgagtccgctggtg
ctgcggaaggagctggaaagtcttctggaccacgagggcgaggcggtgctgggccagccg
cagttcctggagagccactgcatcatcttctggaaccttctgtggttcttccagcgcctc
agcctgcccagccacctgctgcagctgctgcccctcctcgccgagcccgcccagcgggag
ggcgcccgcgtgagggtgcggctcctgtgggacaccctgagcccggaccccgactcgtgg
ccccccctctacgtgctgtggcgtcttcacagcggcgtgcccgtgccgaggttccggcgg
cgccgccgcaaccatccgttcacgctgtccttcctggaggaggtcctgcgctgcgtgggc
atgaacgaggtccacaaggccgtcacgctcttcctcgacaccgtccgcaagacgcagcac
gcgtcggcgccgccgctgcgcaggagcgtgtaccgagagttcctgttcctgacgctggcg
gccatgggcaacgatcacgccgcggccttcgacaagaagtacaaggcggcgtactcgcgc
ctcagcggcgtcgtgggcaaagaagagctgcgcaggaatcgggcgcagccgcccggcgcc
aaggccctcgactgcaggcggggcttccggcccccgctccagtgctga
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