Syngnathoides biaculeatus (alligator pipefish): 133513756
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Entry
133513756 CDS
T09681
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03013
Nucleocytoplasmic transport
sbia03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133513756 (pnn)
03015 mRNA surveillance pathway
133513756 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133513756 (pnn)
03041 Spliceosome [BR:
sbia03041
]
133513756 (pnn)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133513756 (pnn)
Spliceosome [BR:
sbia03041
]
Complex C
Other components
EJC/TREX
133513756 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
133513756
NCBI-ProteinID:
XP_061700802
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All DBs
Position
15:6094685..6105623
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AA seq
686 aa
AA seq
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MAVVVRSLQDQIEKAKQSLKNVDDNIRKLTGRDPNDSRPGQLRRFSGPMAGVAVAAVGGG
GRGRGFNLLRRSLSDIGGGGPPAKQRDIDGALLRLAGDQRARRDVRHDSDAEDDDDVKKP
ALQSSVVATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVCTEKQKRR
SEIEQKLEVQAEVEKKKLESEKRELFEQRRAKQTELRLLEQKVELAQLQEEWTSHNNHLV
KFIRTKTRPHIFYLPGKLCSATQKLLDDSTKKLNAVFEERREAFTEHINKMESRPRRQLN
RDQDGNSAATGKDHSAEGKPAGQVDKVTGNKRVVAMEEEEEEDDEEDQEEEKEKGADGEQ
EEGSKVTEKVQLEEGDSREGLNEDEGMEFEEMGNGEKEGEKREVCGEKNEATPASEGLEV
QVGKEQGDRKKVELDEDSKEGASDLETEKTEITFPSEPTVSQQEASSAVQLSPNTTPTLQ
EPTVLSTEPQIASPVSSSEMAANTPGPEQFVPSSGVQDFSSQNQAEQTQSGDESGVKPPL
DCQDALSGPAALLKEQKDSARGRKKMRGLKKSRGESRSSSSSSSGSSSSGSSSSSSGSSR
SSSSSSSSSSSSSSRSRSRDNGKRSRRQSGRDRKKEEKSHRKKGGNSGGGRDAKGSKEVR
KRRSNEGRSRSSRSNRENRDRKDKRR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtagtgcggagcttgcaagaccagatcgaaaaagccaaacaaagcttgaaa
aatgttgatgataatattcgcaaattaaccggacgagatccgaatgattccagaccgggc
cagctgcgccggttcagtgggcccatggcaggcgttgctgttgcagcagtgggaggagga
ggtagaggaagaggatttaacctgctcagacgcagtctctccgacattggaggcggcggc
ccccctgccaagcagagagacatcgatggagctctgttaaggctggcaggcgaccagagg
gccaggagagacgtgcgtcacgacagtgacgccgaggatgatgacgatgtcaaaaagccg
gcgttgcagtcgtctgttgtagctacctccaaagagagaacacgccgggacctcattcaa
gatcagaccatggatgagaagggcaaacagaggaatcggcggatgtttggcctgctcatg
gggaccctgcaaaaatttaaacaggagtctaatgtttgtacagaaaagcaaaagcggcgt
tctgagatcgagcaaaagctcgaggttcaagctgaggttgaaaagaagaagttggagagc
gagaagagagagttgtttgaacagaggagagccaaacagactgagctgagactacttgaa
cagaaagtagaattggctcagttgcaagaggagtggaccagccataataatcatctggtg
aaattcattcgcactaagaccaggccgcacatcttctacctacctgggaagctgtgctct
gccactcagaaacttcttgatgactctaccaagaaattgaatgctgtgtttgaagagcgg
cgtgaagcgttcacagaacacatcaacaagatggagtcccgaccacggcgacagctaaac
cgcgaccaggacggcaactctgcagcgacagggaaggaccactcggcggagggtaagcca
gcaggtcaggtagacaaggtgacaggtaataagagggttgtagcgatggaagaggaggag
gaagaggatgacgaggaggaccaggaagaggagaaagaaaagggggctgatggagaacag
gaagagggtagcaaggtcacagagaaagtacagctagaggaaggggatagtcgggaaggg
ttaaatgaggatgaggggatggagtttgaggaaatggggaatggggagaaggaaggggaa
aaaagggaggtctgtggggaaaagaatgaggcaactccagcgtcagaggggctggaggtg
caggtaggcaaagagcagggagacaggaaaaaagtggagctggatgaagacagtaaggag
ggggcctcagaccttgaaactgaaaagactgagatcacatttccatctgaaccaactgta
agccaacaagaggcgtctagcgccgtccagctcagccccaacaccacccccaccctgcag
gaaccaacagtcttgtcgactgagccccagatagcctcgcccgtctcatcatctgaaatg
gctgctaacacaccagggccggagcaattcgttccttcctctggggtccaggatttcagc
agccagaaccaagctgagcaaacgcaatctggggatgaatcaggcgtgaagcctccactc
gattgccaggatgccctgagcggccctgctgcacttttgaaggaacagaaagatagtgcc
agggggaggaagaagatgagggggttgaaaaaaagccgcggtgaaagtcgcagctcctct
tcttcctcctccgggtcttcctccagcggaagctcttcgtcttcttctggttcgagccgt
tcatcctcatcatcatcctcatcatcctcctcatccagcagccgaagtcgcagtcgggac
aacggcaagcgcagcaggaggcagtcaggcagggacaggaagaaagaagagaagagtcat
cgcaagaaaggagggaatagtggtggcggcagggatgccaaaggctcaaaggaagtgagg
aagagaaggagcaatgaaggcaggagcaggtcatctcggagcaatagggagaatagagat
agaaaggataaaagacgctaa
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