Syngnathoides biaculeatus (alligator pipefish): 133513995
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Entry
133513995 CDS
T09681
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like isoform X1
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133513995
Enzymes [BR:
sbia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133513995
Spliceosome [BR:
sbia03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133513995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
133513995
NCBI-ProteinID:
XP_061701178
LinkDB
All DBs
Position
16:complement(11411957..11418570)
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AA seq
448 aa
AA seq
DB search
MRFDSLLLESNLLPSSFQVHKMAENDVDNELLDYEDDEEPQGAPESATPVGKKEVKGSYV
SIHSSGFRDFLLKPELLRAIIDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFV
LATLQQIEPVDGQVAVLVMCHTRELAFQISKEYERFSKYMSAVKTVVFFGGLPIKKDEEV
LKKNCPHIVVGTPGRILALVRNKTLSLKNVKHFVLDECDKMLEQLDMRCDVQDIFRITPH
EKQVMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFD
LLDVLEFNQVVIFVKRIQRCIALSQLLVEQNFPAIAIHKGMDQGERLARYQQFKEFQRRI
LVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTL
NDVQDRFEVNVAELPDEIDISSYIEQSR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttgattcactgttgttggagtcgaatctattgccgtccagttttcaggtccac
aagatggctgagaatgatgtcgacaatgagctgctcgactatgaagatgacgaagaaccc
caaggagcacctgagagtgcaacccctgtcggcaagaaggaggtgaagggatcctacgtt
tctatccacagttctggcttcagggacttcctgctcaaaccagagttacttcgtgccatt
atcgactgtggctttgaacatccatctgaagtccagcacgaatgcatcccacaagccatc
ttgggcatggatatcctttgccaagcaaaatctggtatgggcaagacagctgtgtttgtg
ctggccactcttcaacagatcgaaccagtcgatggacaggtcgcagtattagtcatgtgt
cacacgcgagagctggctttccaaattagcaaagaatacgagcgcttctccaagtacatg
tccgcggtcaaaacagtggttttctttggcgggcttcccatcaaaaaagacgaggaagtc
ctgaagaagaactgcccccacatagtcgttggaacgccgggccgcatcctcgctctcgtc
aggaacaagacgcttagcctgaagaacgtcaagcattttgtcctggatgagtgtgacaaa
atgctggagcagcttgacatgaggtgtgatgtacaggacatcttcagaatcacgccccac
gagaaacaggtcatgatgttcagtgccacactgagcaaggagatccgaccggtctgtcgc
aaattcatgcaggaccccatggaggtatttgtggacgacgagaccaaactgaccttgcac
ggtctacaacagtactactgcaagttgaaggacagtgagaaaaaccgcaagctctttgac
ttgctggacgtcctggagtttaaccaagtggtgatatttgtcaagagaatccagcgctgt
atcgccttgtcgcaacttctagtcgagcagaatttccctgctattgccatccacaagggg
atggaccagggggagagactcgctcgctatcagcaattcaaagaattccaaaggcgcatt
ttggtggccaccaacctctttggtcgagggatggacatcgagcgagtcaacatcgtcttc
aactacgacatgccagaagattcagacacttatttacacagggttgctcgcgctggtagg
tttggcaccaagggcctggctataacctttgtgtcagacgaggccgacgccaagactctg
aacgacgtgcaggaccgttttgaggtcaacgtggccgagctgcccgacgagatcgacatc
tcctcttacattgagcagtccagatga
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