Syngnathoides biaculeatus (alligator pipefish): 133514030
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Entry
133514030 CDS
T09681
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133514030
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
133514030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
133514030
NCBI-ProteinID:
XP_061701241
LinkDB
All DBs
Position
16:complement(24833126..24874531)
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AA seq
1994 aa
AA seq
DB search
MPDASRAGRGTWMDSSRPRSVVTMTAEAMQSFRERAGGFHGNQSCYQQEPHEISRLETYR
QHPHHAHPQLPHPGPGLSRSAYEARSLVNAASIATAKEIYSQPTYPGFPLNGGGSGNGGL
ASSQAKKKIPKFPTPTCAQHLQGHGGYGNPLGPGTYSAQYASGGHLQQKWEDSAALTSYE
HELVGRVEAGGTPAPNSSQYVNPNMLGQCHQPPAQSYPGPHQQSHPADPSPSPLMYPQGH
LHYPHPSPYTEKCSPIPPCYKGYSMTPPSQYGRQMSAQANPKPGGVYGPSQNSYGYRHSR
SYEAQPPLQAMSSPQESHPKYQHFSQPQANYCLSELAVRSPEQYYQTCSPSSSHSPARSV
GRSPSYSSTPSPLMTNPESFQYGQPPVTPSSSSASSAGHQEQGASNAALLPPRSHPSPGA
ASHAFANAQQQERFSEKLLSNPSLWSLNVLTSQVENISNNVQQLLLSETLVASKKSAKRN
GSSGSAASSKKGEDYKSPYPESAGGVGAGPMQELYSSVQQHQRIPTTDLPEGGYSSGSDE
QLERGYFYRSRGRSPAQPPGNTRIDADAVSSRSVTSPDARSGDSGLRSYVPDPMRCQSAQ
GGASPPVKSIGEGRSPVGVTVPSPMKPAADSSSDVQQVIQPVKENFEGRSWTDRSAGKGA
EAQHERDVTQPKEKWPDEDKCSSLYGQVSKGGAEKDFGYTGRVQRRYDPDSLQGCSDPGR
HFAQDVKEAHESHPSIASVSSLKTFSPASDFEQDRYSTEKEKEGSTGNASPTSQTDKRPK
KAESVGLTEEGNHGRESKSAEPRRRALSHSRSDEVRKGRGQEESMTSDSANNRHASDKPS
ADLYDRTETQRPERRGDKELAGVPAHPNVAAAPDSSSRESAICDSARQPRSAMPVFSALG
DNHIDHGDAKVLEPDSPQLPGKSILPSAPSWADTPPSPKKGDEDVEPGLSCSSAVTPSAK
PELVAPSAQPRPFGRKHAGGGGRXSDRATVSSGRDGEGDPHSKTVLFSNQTEFARQQSIA
SQAAEMLTESLRSRMCTRSYNAADLPSKGQAHLKRNPGPKPGLKKQPKPGSKLAPKPGPK
AKAAPNPQTPTGKIGAGAAAKRKLGPRPGVKPQPEPGPQSASPPAGDLGDQAPVGRPKGS
VSKVKLSRRGEIATRLTGTQAKGRKKAPAQIKQHIQVMRRDENDIEAQQNHDKNMTLRSR
RPSQTKGANEKEKNVHKDLLTATLAEIGAADCCEKEECSTEAQSGKAAESPTEAPEMLPA
DERATLPLQSQSSVEPSMAPVKKRRGPKPKAKAKALGPQAAAVPGARGKRGPPGKESEVP
YRPQRATDGDPGDAPVGPPHCLTRTKVLPPRKGRGQKYEAMVQKITSPGSKKFLPSPQAD
GGLRDDAATKDGETAIPVDGTEVMASEVKSGRDGVKHPEGKEVKRESEKQRDTSQEEDLD
LKQRLPEGDAKGQEHKPGTVRRLQRAMEAQVDLGPRGEWTQRAKALVGAAVSTSKSKSSK
RKPCATGEGTRASVVASGSGGSPVVTAPRAAKQRAIKNNREMHLKQKRKRKSPPPAGAAK
QIKVEAPEEQEWIAEETATPLRAPAVTTASDHIKGSPEVGRKAKRGRKPAANPAQRRPGK
ASSGEISDKPLKVYKKPGPKPGMKDAMEVIEAVVRAAGCEAERAERRKPETEAEPEEKRR
AVSEQRTQTISGKRFRNEPVQRSLRSFCPYVRMNNSRDFSSWCAVVNKPEDVQVFQRRRK
KGILRMKNPFTVAKVVPRTAAMLQGAAVDAALAGRPLACCLCRKPPNYRDLGDLCGPYYT
EDRLPRKLLAVQPAPSPPRVRGESDEDRARASKWKAEGEAPESPQAGAGGRRHRRPYGRA
ERRDGMSRKDVPPRLPLRQRLRRIRQIRAGLADDRAGPFRRRREEAQADEHWAHENCAIW
TKGVIMVAGRLYGLKEAADNSAQTNCRKCRTAGASLSCCWRSCSRKYHYVCAKEIGCTFH
EDDFSIKCPKHEDL
NT seq
5985 nt
NT seq
+upstream
nt +downstream
nt
atgccagacgccagccgagcaggtcgtgggacttggatggactcgagtcggccacggtct
gtcgtcactatgacggcggaagccatgcagtccttccgcgagcgcgccggcggtttccac
ggcaaccaaagctgctaccagcaggagccccacgaaatatcacgcctggagacgtaccgc
caacatccgcatcacgctcaccctcagctgccccacccgggcccggggctttccaggtcg
gcctacgaggcccgctccctggtaaacgccgcgagcatcgcgacggcaaaggagatctac
agccagccgacctacccgggtttcccgctcaacggcggcgggagcggaaacggaggcttg
gcctcctcgcaggcgaagaagaaaatccccaagttccccacgccgacttgcgcgcaacat
ctacagggtcacgggggttacggtaaccccctgggtcccgggacctactcggcccagtac
gcgagcgggggccacctccagcagaaatgggaggactcggccgcgttgacgtcgtacgag
cacgagctggtcgggcgcgtggaggccggcggcacccccgccccgaactcctctcagtac
gtgaacccgaatatgctgggccagtgccaccagccacccgcccagtcttaccccggcccc
catcagcagtcgcacccggccgacccctccccttctcctttgatgtacccgcaaggtcac
ctgcactacccccacccttcgccgtacacagaaaagtgcagccccatccctccgtgctac
aaaggttacagcatgacgccgccttcccagtacggcaggcaaatgagcgcccaggctaat
ccgaagccaggcggggtctacgggccctcccagaacagctacggctaccgacactccaga
tcttacgaggcgcagcccccgttgcaggccatgagcagcccccaggagtcccacccaaag
taccagcacttcagccaaccgcaagccaactactgtctctcggaattggccgtgaggtcg
cccgaacagtattaccaaacttgcagcccgtcctccagccattctcccgcacgctcagtg
gggcgctctccctcgtacagctccaccccttcgccgctgatgaccaatccggagtccttc
cagtacgggcaaccgcccgtcaccccgtcgtcgtcctccgcctcctcggcgggccatcaa
gagcaaggcgcttccaatgccgccttgttgccgccgcgctcgcacccgtcgcccggcgcg
gcgtcccacgccttcgccaacgcccagcagcaggagcgcttctcggaaaagctgctgtcg
aaccccagcttgtggagcctgaatgtcctcacctctcaggtcgagaacatatccaacaat
gtccaacagttgctgctctccgagactctggtggccagcaagaaatccgcaaagcgcaac
ggcagctccggaagcgccgcgtcctccaaaaaaggcgaggactacaaaagtccgtatcca
gaaagcgccggcggcgtgggcgcgggcccgatgcaggagctttactcgagcgtgcagcag
catcaacggatcccgacgacggacctacccgagggaggctactccagcggtagcgacgaa
caactggagaggggctacttctacagaagccggggcaggagtccagctcagcctcccggc
aacactcgcatcgacgcggacgcggtctcatcccgttccgtcacatctccagacgctcgg
tccggagactcgggattgcgcagctacgttcctgacccgatgagatgccagtcggcgcaa
ggaggagcgagccccccggtgaagagtatcggcgaggggaggtctcccgtcggcgttacc
gttcccagtcctatgaaacccgccgcggactcctcttctgacgtacagcaggtcatccag
cccgttaaagaaaactttgagggccgctcgtggacggacaggtccgccggcaaaggagcg
gaggctcaacatgaacgagatgtcactcaaccgaaagagaaatggccagacgaggacaaa
tgctcctctctatacggccaagtaagcaaagggggagccgaaaaagactttggctatacg
gggagagtccagagaagatatgacccagattcactccaagggtgctctgacccgggccgc
cattttgcccaagacgtgaaagaagcgcacgaatcacatccctccattgcttccgtgagc
tcactgaaaacgttcagtcctgcgagtgactttgagcaggatcgatattccacggagaag
gagaaggagggcagcaccggcaacgcctcgccgacctctcaaactgacaaacgtccaaag
aaggccgagagcgtaggattgacggaggagggaaaccatggacgggaatcaaagtcagcc
gaaccaaggcggcgcgctctttcccattccaggtccgacgaggtgaggaagggacggggg
caggaggagtcgatgacttctgactccgccaataataggcacgcatccgacaaaccttct
gcagacctttacgacaggacagagactcaaaggcccgagcgccgtggcgacaaagagctc
gcgggagtgccggcgcacccgaacgtggcggcggccccggactcttcctccagagagtcg
gccatttgcgacagcgctcgccagccccgatccgctatgccggtcttctccgctctcggc
gataatcacatcgatcacggcgacgctaaagtgctggagccggactcgcctcagctgccc
gggaagtcgatacttccctcggcgccctcctgggccgacaccccgccctccccgaagaaa
ggcgacgaggacgtggagccgggcctcagctgctccagcgccgtgaccccctcggccaag
ccggagctcgtggccccgtctgctcaacccaggccgtttggacggaagcacgccggggga
ggggggaggnaaagcgatcgggcgaccgtaagctcggggagggacggagaaggagaccct
cacagcaagaccgtgctcttctccaatcaaaccgagttcgcccgtcagcaatcgatagcg
agccaggccgcggaaatgttaacggaaagccttcgttccagaatgtgcacgcgctcgtac
aatgcggcggatttgccatccaagggccaggctcatttgaagaggaacccgggccccaaa
ccagggctgaaaaaacaaccaaaacctggaagcaaactcgccccgaagcccgggccaaaa
gcgaaggctgcgccgaatccacaaactccgacgggaaaaatcggggccggggccgcggcc
aaacggaagctggggccccggccgggcgtgaaaccccagccggaaccgggacctcagtct
gcttcgccgcccgctggagacctcggcgaccaggcccccgtcggtcgtcccaaaggttcc
gtttccaaggtgaagctgagccgacgaggagagatcgccacgcgtttgacggggacgcaa
gcgaagggcagaaaaaaggcaccagcacaaataaagcagcatatacaagtcatgcgccgc
gatgaaaatgacatagaagcgcagcagaatcacgataaaaatatgaccctgaggtcgagg
aggccctcgcagactaaaggagcaaacgaaaaggagaaaaacgtacacaaagatctttta
acagcaacgctggcagaaattggcgcagcagattgttgtgaaaaagaagaatgttcgacg
gaggcgcaatcggggaaagccgcagaaagcccaacagaagctcctgaaatgcttcccgct
gacgaaagggcgacgcttccactgcaaagtcagtcatccgtggaaccctcgatggcgccc
gtcaagaaaaggaggggcccaaagcccaaagccaaagccaaagcactcgggcctcaagcg
gccgccgttccgggggccagagggaagagaggaccgcccggcaaagagtccgaggtcccc
tatcgtccccaacgtgccaccgacggggatccaggcgacgcgcccgtcgggcctccccac
tgcctgaccagaacaaaagttctccctccgcggaagggcagaggacagaaatatgaggcc
atggtgcagaaaatcacgtcgcccggctccaagaaattcctcccgtctcctcaggcggac
ggcggtctccgcgatgacgcggcgacgaaggacggggagacggctattcctgtcgatggc
acggaggtgatggcaagcgaagtgaaaagcgggcgggacggcgtgaaacacccggaagga
aaggaggtcaagcgcgagagtgaaaagcagcgggacacgagtcaagaagaggacctggac
ctgaagcaaaggctgccggaaggggatgccaagggccaagagcataaacctggcacagtg
cgcagactccaaagggccatggaggctcaggtggacctcggccctcgaggggaatggacg
cagcgggcgaaagcgctcgtcggcgcggccgtgtccacgtccaagtccaagtcctcgaaa
aggaagccgtgcgcaacgggggaggggacgcgagcttccgtcgtcgcttcggggtccggg
gggagccccgtcgtcaccgccccgagagcggccaagcagagggccattaaaaacaaccgc
gagatgcacttgaagcaaaagaggaaacggaaaagtccgcccccggcgggagcagcgaag
cagatcaaagtcgaagctccggaggaacaagagtggatcgcggaagagacggcgacgcct
ctccgggcgcccgcggtgacaaccgccagcgaccacatcaaaggaagccccgaggtcggc
cggaaagccaagagggggaggaaaccggccgcaaatccggctcagcgccgaccggggaaa
gcctcgtccggggagatttccgacaagccgctgaaagtctacaaaaagccggggcccaaa
cctgggatgaaagatgccatggaggtcatagaggcggtggtgagggccgccggctgtgaa
gcggaacgagcggagcggcgaaaacccgagacggaagcggagccggaggaaaagcgccgc
gccgtctcggaacaacggacgcagaccatttccggcaagagattcagaaacgagccggtc
caacggagccttcgctctttttgtccctacgtgcgaatgaacaactccagagacttttcc
tcttggtgcgccgtcgtcaacaagcccgaggatgtgcaagtctttcagagacgcagaaaa
aagggaattctccgaatgaagaaccctttcaccgttgccaaggtggtgccgcgcaccgcc
gccatgctgcaaggagccgcggtcgacgcggctctcgccgggcggccgctcgcgtgctgc
ctgtgccgaaaaccgccaaactaccgagatttgggcgatctgtgcggaccctactacacg
gaagaccgacttcctcggaaactgttggccgtccagccggcgccttccccgccccgtgtc
cgaggggagagcgacgaggatcgagcgcgcgcgtcaaagtggaaggctgaaggcgaggcg
ccagaatctcctcaagcgggcgccggcggcaggcggcaccggcggccgtacgggcgggcc
gaaagaagagacgggatgtcgcggaaggacgttcctccgaggctgccgctgcgacagagg
ctcaggaggatccggcagatccgggccgggctcgccgacgaccgagcgggcccgttccgg
aggcggcgggaagaagcgcaggccgacgagcactgggcccacgaaaactgcgccatctgg
accaagggcgtgatcatggtggccggacgcttatacggactgaaggaagccgccgacaac
tcggcccaaacgaactgccgcaagtgccggactgccggggcgtccctcagttgctgttgg
aggagctgctctcgtaaatatcactacgtctgcgccaaagagatcggctgcacattccac
gaagatgacttctccatcaaatgtcccaaacatgaggatttgtaa
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