KEGG   Syngnathoides biaculeatus (alligator pipefish): 133514091
Entry
133514091         CDS       T09681                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04137  Mitophagy - animal
sbia04144  Endocytosis
sbia04145  Phagosome
sbia04148  Efferocytosis
sbia05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133514091 (rab5c)
   04145 Phagosome
    133514091 (rab5c)
   04137 Mitophagy - animal
    133514091 (rab5c)
   04148 Efferocytosis
    133514091 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    133514091 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sbia04131]
    133514091 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sbia04147]
    133514091 (rab5c)
   04031 GTP-binding proteins [BR:sbia04031]
    133514091 (rab5c)
Membrane trafficking [BR:sbia04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    133514091 (rab5c)
 Endosome - Lysosome transport
    133514091 (rab5c)
Exosome [BR:sbia04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133514091 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   133514091 (rab5c)
  Exosomal proteins of colorectal cancer cells
   133514091 (rab5c)
  Exosomal proteins of bladder cancer cells
   133514091 (rab5c)
GTP-binding proteins [BR:sbia04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    133514091 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 133514091
NCBI-ProteinID: XP_061701386
LinkDB
Position
16:17566971..17581290
AA seq 220 aa
MAGRGGPARTNGAAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKEL
QRQASPNIVIALSGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKNEPQGGAGAGSRARGGVDLQEAAPQGRSSQCCGGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggccggacgaggcggaccggcgcggaccaatggcgccgcagcggccagcaacaagatc
tgccagttcaagctggtgctgttgggtgagtcggcggtgggcaagtccagcctggtgctc
cgctttgtcaaaggccagttccacgagtaccaggagagcaccatcggagcggccttcctc
acacagacagtatgcctggatgacacaacggtgaagtttgaaatctgggacactgcgggc
caggagcgctatcacagtttggcgcccatgtactatcgaggtgcccaggcagccattgtc
gtgtatgacatcaccaacacggacactttcgcacgtgcaaagaactgggtgaaggagctg
cagcgacaagctagcccaaacattgttattgctttgtctgggaataaagctgacctagcc
aacaagagagctgtcgatttccaagaggcgcaagcatacgccgatgacaacagtttgctc
ttcatggagacatctgccaagactgccatgaatgtgaatgagatctttatggctatagct
aagaagctccctaagaacgagccgcagggcggcgcaggagccggcagccgcgcccgggga
ggcgtggaccttcaggaggcagccccccagggccgcagcagccagtgctgcgggggcaac
taa

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