Syngnathoides biaculeatus (alligator pipefish): 133514157
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Entry
133514157 CDS
T09681
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133514157 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133514157 (mbd4)
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133514157 (mbd4)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
133514157 (mbd4)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
133514157 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
133514157
NCBI-ProteinID:
XP_061701567
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All DBs
Position
2:complement(28790571..28796328)
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AA seq
381 aa
AA seq
DB search
MDTDKSGHPAKMPPGWTREVRQRRAGKTVGKLDVYITSPHGRRFRSRASLRAYLVKNAQD
VDISRFDFKAAALECLPVREERTRGGQQPDVVEDASKLLQAPTSTRESTSSPREGLHAER
RNLVDLDSKTTPELASVACDDVTSDEDPRRLDRLRARRIPDAGEDELHVDGEPGRQQNVV
PDAEEDELPSQIAAGNLAPVANSRHKSKCSEDKRKTSPYFGRKPLADGPSPPRRKAFKKW
TPPRSPFNLVQETLFHDTWKLLVATIFLNKTSGKMAIPVLWKFFELYPCAEAARRADAEA
VSELLKPLGLFELRAKIIIRFSDEYLSKRWRYPIELHGIGKYGNDSYRIFCVEEWRRVTP
DDHMLNKYHAWLWENQQTLGI
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggacacggataagtcgggccaccccgccaaaatgcctcccggttggaccagagaggtt
cggcagcgacgggcggggaagacggtgggaaaactggacgtgtacatcaccagtccccac
gggaggaggttccgatccagagcttctctgcgggcgtacctggtgaaaaacgctcaagac
gtcgacatcagtcgcttcgattttaaagcggccgctctcgagtgtctccccgttcgggaa
gaacggacgagaggtggacagcagccggacgttgtggaagacgcgtcaaaactactgcaa
gcgcctacaagtacacgtgaaagtacaagctccccccgtgaaggcctgcatgcggagcgg
aggaacctcgtcgatctggacagcaaaacaactcctgaacttgcaagtgtggcgtgtgac
gacgtcacatcggatgaggaccctcgcaggctggaccggctacgggcgagacggattccg
gatgcgggcgaggatgagttgcacgtggacggcgaacccggtcgtcaacagaatgtcgtc
cccgatgccgaagaagacgagttgccgtctcaaatcgctgctggaaacctcgcaccagta
gcaaattccagacataagtccaaatgttcagaggacaaacggaaaacaagcccttatttt
ggcaggaagcccctggcagacggtcccagtccacctcgaagaaaagccttcaagaagtgg
accccacctcggtctcctttcaacctggtacaagaaacccttttccatgacacgtggaag
ctgctggtggccaccatttttcttaacaagacgagcggtaagatggccattccggtcctt
tggaagttcttcgagctgtacccgtgcgccgaagcggcccggcgagccgacgccgaggcc
gtgtccgaactcctcaagccgctcggcctctttgagctccgggccaaaatcatcatccgg
ttctcagatgaatatctgagcaagcgctggcgttaccccatcgagttgcacggcatcggc
aagtacggcaacgactcctatcggatcttctgcgtggaagagtggaggcgggtgacgccc
gacgatcacatgttgaacaaatatcacgcttggctttgggaaaaccagcagacgctcgga
atctga
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