Syngnathoides biaculeatus (alligator pipefish): 133514240
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Entry
133514240 CDS
T09681
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04010
MAPK signaling pathway
sbia04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133514240 (cacna1ha)
04020 Calcium signaling pathway
133514240 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133514240 (cacna1ha)
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133514240 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
133514240
NCBI-ProteinID:
XP_061701743
LinkDB
All DBs
Position
16:13481850..13606680
Genome browser
AA seq
2339 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVTCLSEWCRILQVLDDCIFAFFAVEMIIKMVALGIFGSNCY
LGDKWNQLDFVIVMAGVLEYSLDGQNASFSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLGADIRTKYNFSISPYYMSEDGEDS
PFICSAARENGMLRCHDVPAYTEAKTQCQLPAPHQSSDLIGATPAVGGASVNGCVNWNQY
YNVCRAGDHNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLI
IVGSFFMINLCLVVIATQFSETKQRENALMREQRARYMSNDSTLASYSEPGSCYEEMLRY
ISHLYRKFTRRLQRMYSGWHSKMRKKVNPNSSGGGSNGGGNGHGHGSSRASGPRSALWLR
PIHNLLQHHQHQHCRLPNGGQHMSSVASTEHLAGEGGVGAVELEMKSLPASQGSTNGNSG
GNQSAVTQGMGALLRRLNGGMNYPTILPSFVCSYSSKTPPPHSQQGGCSPDQHPPNHSTS
EHSDKVNKLYQLVGQHSHQSVLYQLAGVVPSPLLLELLSCPLCARSLETLELELGDLEGC
KGEADGLHEFVQGGDLRGGRSRGRRHGAVVYKNGALRAWMNFREKLKRIVESKYFNRGIM
IAILVNTLSMGIEYHEQPEELTDVLEISNIVFTSMFVLEMGFMLLAFGLFGYIKNPYNIF
DSIIVIISVWEIIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCM
LLMLFIFTFSILGMHLFGCKFSLQTDDGDTIPDRKNFDTLLWAIVTVFQILTQEDWNVVL
YNGMASTSPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSESDDDKKSDNFEE
DEKVEQLRDTELKMYTLMMTTNGHVDPRGSMAPPIIMRTAATPMPTPKSSLGPESYLEEE
VMVREGVLQYGEAGLSEPGTGYQEARRGSSTSMDALTCDQRSLSLSSPARRSPLLTRGSS
SWGSRRSSWNSLGRAPSLKRRDASGERESLLSAERGEEENGGDDSTNAGGYDNRIQPEPL
ELLQASTLCPSIVAQYGDCNGRSMTFNSNVNTDSKDESLPEDDMDDDSSLCYMIKKELRN
MKPRWCKEHEEWTLYLFSPENSFRVWCQSVSSHKMFDHVVLVFIFLNCITIALERPNIQP
HSTERIFLGVSNYVFTVIFLAEMTIKVVALGFGFGKQSYLQSSWNVLDGVLVFVSLVDIL
VSLAYSGGNRILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAF
FIVFGILGVQLFKGKFYHCEGLNTKNITNKSDCLHANYSWIRRKYNFDNLVQALMSLFVL
SCKDGWVNIMYDGLDAVGVDQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHK
CRQDQEEEEARLREEKRLKIIEKKRRKAKQRPYYADYSTPRLTIHTLCTSHYLDLFITFI
ICINVFTMSIEHYNQPQYLEEVLKYCNYVFTFIFVIEALLKLVAFGIHRFFKDRWNQLDI
AIVALSIMGIILEELKMSAALPINPTIIRIMRVLRIARVLKLLKMATGMRSLLDTVMQAL
PQVGNLGLLFMLLFFIYAALGVELFGKLECNDNNPCEGLSRHATFENFGMAFLTLFRVST
GDNWNGIMKDTLRECHPEERHCLSYLPWVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEES
NKEAKEDAEMDAEIAMEMAMEQQRRFSRTSSNSSEAGTFVGPCPQSPGQEEEEVRCSEDP
QQISEKMSVSRMHSLPNDSYMFRPVRPASAPDPLEEVDVSAQDQHSGSLTSVRSQPCESR
ALLQVPDISPVHPRLLASINLPRIAPPTPHPSPRALRRQVAVKVDSVEAQSCEQEERPNA
VHLPLPSPSLHSPLPPPTPSSPSVLSIPPCSPSPFPPSSLSSSPLPPLRSSPASLPPPPS
SPSLLLPPPRSPRFPPRTASLHRPRPPSTASLFDLADEEVCHITSLARHRQIGELGIRQE
SRTKAGRSHSLSPYTDSTSPPPPSSFPRPSSRSLLGADLKDRDFRKGFSVDTQGFLRKPS
LLSAGYLDDHRRHSIEVCLPQDGVASDDQHFKGGLHKEKGSFPMRVQSVGGGHRKKKTSP
PCISIHPPSEREHPPSPPKLADCSMMLRRRTPSYDLTAHTQDIFVDTQAHSSMHQALKPV
HVSPQTHSPTQTLTPSATSTPTHAYTPPLPSTPTHPPIPISPNIFIQPHAPLVPRPFSQT
RPISPAPRHAARDCIPLPQFTFEQPQSRYLADADPAPCTSPFDNKLASGFSAKNRRTAQ
NT seq
7020 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgatcctcctcaactgcgtcaccttggggatgttccagccctgcgaagatgtc
acctgcttgtcagagtggtgtcgcatactccaggttttggatgactgtatatttgctttc
tttgcggtggaaatgatcatcaagatggtggccctggggatttttggcagcaactgttac
cttggcgacaagtggaaccagctggactttgtcatcgtgatggcgggggtgttggagtac
tctctggatggacagaatgccagtttctcagcaattcgtactgtacgagtactgaggcct
ctacgagccatcaatagagtaccaagtatgagaatcctggtgacgcttctgttggacact
cttcctatgttgggaaatgtcctcctcctctgcttctttgtctttttcatctttgggatc
gttggggtccagctgtgggcggggcttctgcgaaaccgctgctttctgggagctgatatc
agaacaaaatacaacttctcaatcagtccctactacatgtcggaggatggtgaagatagc
ccatttatctgctcagcggctcgtgagaacggtatgctccgctgccatgatgttcccgcg
tacaccgaagccaagactcagtgccagttaccggcacctcaccaaagttcagatctgatt
ggagcgacccctgcagtgggcggggcaagcgtaaatggatgtgttaattggaaccagtac
tacaatgtgtgtcgcgcgggagatcacaaccctcacaagggagctgtcaactttgacaac
attggctatgcttggattgctattttccaggtcatcacacttgaaggatgggtggatatc
atgtactatgtcatggatgctcattcattctacaattttatatattttatactactcatt
attgtgggatctttcttcatgatcaacttgtgcctcgtggtcatcgccacccagttctca
gagacaaagcaacgggagaacgctcttatgagggaacagcgtgctcgctacatgtccaat
gattccacacttgccagttacagtgaaccaggctcgtgctatgaggaaatgctgcgctac
atcagtcacctttaccggaagttcacacgcagactccagaggatgtactctggatggcac
agtaaaatgcgtaaaaaggtgaatcctaacagcagtggtggaggcagtaatggtggaggt
aatggacatggccatggctctagcagggcttccggtccacgtagcgctttgtggttgagg
ccaatacacaacctgttgcagcaccatcagcaccagcactgtcgactccccaacgggggg
cagcacatgagcagtgtggcaagcactgaacacctggctggagaaggaggtgtgggtgcc
gtggaactggagatgaagtcacttcctgctagtcaagggagtacaaatggaaatagcggc
ggcaatcaatcagctgttacccaaggcatgggggccttgctcaggagactcaatggaggg
atgaactacccaaccattctgccatcatttgtatgcagctacagcagcaagacaccaccg
cctcactcccagcaaggtggttgcagtccagatcagcatccgccgaaccactccacttct
gaacactcagacaaagtgaacaaactctaccagcttgtgggacagcacagtcaccagagt
gtgctgtaccagctggcaggcgtggtacccagtccactgctcctggaactactgagctgc
cctctctgtgctcgcagcctggagaccttggagctggagttgggtgacttggagggttgc
aagggagaagccgatggactgcacgaatttgtccagggaggagatctgagaggtgggaga
agtcggggcagacgacatggggctgtggtgtacaagaacggagcacttcgggcatggatg
aacttcagggagaaattgaagagaatagtggagagcaaatattttaacagagggatcatg
attgccatccttgtcaacactctcagcatggggatagagtaccatgagcagccagaggag
ttgacggatgtgttggagatcagcaacatcgtcttcacgagcatgtttgtgttggagatg
ggcttcatgctgctggctttcggcctgttcggatacatcaaaaatccatacaacatattt
gacagcatcattgttatcatcagtgtgtgggagattattggtcaagctgacggcgggttg
tcggtcctacgtactttccgtctgcttcgggttctgaagttggttcgcttccttcctgca
ttgaggagacaacttgtagtcctgatgaagacgatggataatgtggccaccttctgcatg
cttctgatgctcttcatcttcaccttcagcatattgggcatgcatctgtttggttgcaaa
tttagtcttcagacagatgatggagacaccattcctgaccgcaagaactttgacactcta
ctgtgggccatcgtcaccgtatttcagattctaacccaggaggactggaatgtggtgctg
tataatggtatggcttccacctccccatgggcagctctctactttgttgccctgatgaca
tttggaaactacgtgcttttcaacttgctggtggccatcttggttgagggtttccaggct
gagggtgatgcaaatcgctccgagtcagatgatgacaaaaagtcagacaactttgaggag
gatgagaaagtagaacagctcagagacaccgagctaaagatgtatacgctaatgatgacg
accaatggtcacgtcgaccctcgtggttcgatggctcctcccataatcatgcgaacggca
gccacccccatgcccactccaaagagttcgctgggcccagagtcctacctggaggaggag
gtcatggtgagagagggagttctgcaatatggagaggccggactttccgaaccagggact
gggtaccaagaggctcgccgtggaagctctacctccatggatgccttaacatgtgatcag
agatcattgagcctctccagtcctgcacgccgctcccctcttctaactcgtggttccagc
tcctggggaagccgtcgctctagctggaatagcttgggaagagcgccgagcctcaaaagg
cgagatgctagcggcgaaagagagagcctgttgtcggcagaaagaggagaggaggaaaat
ggtggtgatgacagtaccaatgctggcgggtatgacaatagaatccagccggagcccttg
gagctgctgcaggcatccactctctgcccttccattgtggcccagtatggtgactgtaat
gggaggagcatgactttcaattccaatgtaaacactgactccaaagatgaatctttgcct
gaagatgacatggatgatgatagttccctttgctacatgatcaagaaagagcttcgcaat
atgaaacctcgctggtgcaaagaacatgaagaatggacgctgtacttgttttcaccggag
aactcatttcgtgtgtggtgccaaagtgtgagctctcacaaaatgtttgaccatgtggtt
ctggttttcatcttcctcaactgcatcaccatcgctcttgaaagacctaatatacagcct
catagcacggagcgaatatttcttggagtgtccaactatgttttcactgtgatcttccta
gcagagatgaccattaaggtggtagcgctcgggttcggcttcgggaagcagagctacctt
cagtccagttggaacgttctggatggtgtgttggtttttgtatctctggtcgacattctg
gtctcactggcatattctggtggtaaccggatcctgggcatcctccgagttctacgcctg
ctccgcacattgcgcccactcagggtgatcagtcgggcaccggggttaaaattagttgtg
gagactctcatcacttcgcttcggcccatcggcaacattgtcctgatctgctgtgctttc
ttcattgtttttggcatcttgggggtgcagttattcaaaggaaagttctaccactgtgaa
ggtctcaacaccaaaaatatcaccaacaaatctgactgtctgcacgctaactacagctgg
atacgaaggaagtataactttgacaacctggttcaggctctgatgtctttgtttgtcctg
tcatgtaaggacggctgggtcaatattatgtacgacggtctggatgctgtgggagtggac
caacagcctgtgaggaaccacaacccatggatgctgctctacttcatctcctttctcctc
atcgtcagcttttttgtcctgaacatgttcgttggggttgttgtggagaatttccacaag
tgccggcaggaccaagaagaggaggaggcccgcttaagggaggagaagaggctcaaaatc
atagaaaaaaagcgcaggaaggccaaacagaggccctactatgctgattactccacacca
cgcttgaccatccatacactgtgcaccagtcactacctggacctgttcatcaccttcatc
atatgcatcaatgtcttcaccatgagcatcgagcactacaatcaaccgcagtatttggag
gaggttttgaagtactgtaattacgtgtttaccttcatcttcgtcatcgaagccctgctt
aaactcgtggcatttgggatccaccgatttttcaaagacaggtggaaccagttggacatt
gcaattgtggcactgtccatcatgggcatcattctagaggagctaaaaatgagtgcagct
cttcctataaatcctacaatcatcaggattatgagagtgctcaggatagcaagagtactt
aaactccttaagatggccacaggcatgagatctctgctggacactgtcatgcaagccctg
ccacaggtgggaaatcttggtctcctcttcatgctgcttttcttcatctatgccgccctg
ggagtggagctctttggcaagcttgaatgcaatgacaacaatccctgtgagggcctgagt
cgtcatgccacctttgaaaattttgggatggcctttctcacactgtttcgagtgtccacc
ggagacaactggaacggcattatgaaagacacattacgagagtgtcatccagaggagcgc
cattgtctctcctacctgccatgggtctctcccatttactttgtcacctttgtgctcatg
gcccagtttgtgcttgtcaatgtggtcgtggctgtgctgatgaagcatctagaagagagc
aacaaggaggccaaagaggatgcagaaatggatgcggaaattgccatggaaatggctatg
gagcagcaacgcagatttagcaggacttccagcaacagctcagaggcgggaacctttgtt
gggccgtgcccacaatcgcctggccaggaggaagaagaggtgcgttgtagtgaggatcca
cagcagatatctgagaagatgtccgtatctaggatgcactccttgccgaacgacagctac
atgttccgacctgtgcgacccgctagtgctcctgaccctctggaggaggtggatgtcagt
gctcaggaccaacattcagggtcactgacgtcagtccgttcgcagccgtgtgagagtcgt
gctctgcttcaggttcctgatatttcccctgtccacccgcggttgcttgcttccatcaac
ctgccacgcattgccccgcctacgccccacccctctccacgggccctgcgcagacaggtg
gcagttaaagttgattctgtagaagcccaaagttgtgagcaagaagagaggccaaacgct
gtccatcttcctctgccgtctccttctctacattctcccctgcctccacccactccctca
tccccctcagttctctccatcccaccctgctccccttctccatttccaccctcttcgcta
tcttcatctcctctccctcctttaaggtcttccccagcctccctccctcctccaccttcc
tcaccctcgcttctcctcccaccacctcgctctccacgcttcccaccgcgcaccgcaagc
ctccaccggccgagaccaccctccactgcctccctgttcgacctggctgatgaggaggtg
tgtcacatcaccagcttggcccgccacaggcagattggcgaactgggaatccgacaggag
agcagaacgaaggcaggacgcagccactccctctctccatacactgactcgacctcccca
cctcctccgtcttcattcccgcggccatcctcaaggagcctgctcggagcagatttgaag
gaccgagactttagaaaaggctttagcgttgacacccaggggttcctgcgcaagccgtcg
ttgttgtccgccggttaccttgacgaccatcgccgccactccatagaggtgtgtctccca
caagatggcgtcgccagcgatgaccaacactttaagggggggctccacaaagagaagggc
agtttcccaatgagggtgcagtcagttggaggtgggcaccggaagaagaagacgagccct
ccgtgcatatccattcaccccccttccgagagggagcacccgccctcacccccaaaacta
gcggactgcagcatgatgctaagacgaaggacgccgtcttatgacttgactgcacacacg
caagacatctttgtggacacgcaggcgcattcatcaatgcatcaagctctcaagcctgtc
cacgtgtcaccccaaacacactcaccgacacaaaccctgacgccctcggcgacctcgaca
cccacacacgcatacacaccacccctgccgtcaacccctacgcacccgcccatcccgatc
agcccgaacatcttcatccagcctcacgcccctctcgtgccgaggcctttctcacagacg
cgccccatctcgcctgccccacggcacgctgcgagggactgtatccccttgccccagttc
actttcgagcaaccgcaatccagatacctggcggatgcagatcccgcaccgtgcacttca
ccttttgacaacaaactggcaagtggattcagcgcaaagaaccggaggaccgctcaatga
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integrated database retrieval system
