Syngnathoides biaculeatus (alligator pipefish): 133514297
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Entry
133514297 CDS
T09681
Name
(RefSeq) integrin alpha-3-like isoform X1
KO
K06482
integrin alpha 3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
sbia04810
Regulation of actin cytoskeleton
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133514297
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133514297
09142 Cell motility
04820 Cytoskeleton in muscle cells
133514297
04810 Regulation of actin cytoskeleton
133514297
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133514297
04515 Cell adhesion molecules [BR:
sbia04515
]
133514297
04090 CD molecules [BR:
sbia04090
]
133514297
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133514297
Cell adhesion molecules [BR:
sbia04515
]
Integrins
Integrin alpha subunits
133514297
CD molecules [BR:
sbia04090
]
Proteins
133514297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
133514297
NCBI-ProteinID:
XP_061701837
LinkDB
All DBs
Position
16:complement(25168128..25180294)
Genome browser
AA seq
1066 aa
AA seq
DB search
MQCSLYGPLYFCVHSFCKECVCARLSFVFQAMSACVSVSVATCVCLLVSSCAASNVDTRF
PLVKTGADGTFFGLSVALHSDLKSRTHLLLVGAPRERAEPDVPANRTGGVYSCPITADPS
DCRRLSLIDRDLDLSEDLVEDMWLGVSLASQGPPGGRVLVSPRVADGMSIYGPACGHRFV
KVYGASKLRHMIGRCYLRDGADDQWRSLEQLCSHLGDVSREVMCNSGMSAAIFRRDLIVG
SPGSYQWQGNVHVTWTNPRVIFDTGRSSFPNLQRRNIYLGYSVTQAAGLLSRDDVTIVTG
APKDTKEDARGSVLLAVKGAGAELTVRQTLRGEQTGSYFGNAVAAADLDNDGWQDLLVGA
PFYFQRQRGVGGAVYVYMNAGGRFRSTATSALKGPPASAFGMAVAHAGDLDGDGFQDFAV
GAPFHGTGSVMIWRGSGSGVSARPGQVISGSSLSPRLSTFGFSLSGGLDVDGNGHPDLLV
GSLDDTAVLLRSRPVIHLNKTIRVSPNIVEPNTCDFCISVEVCFSYTWSSGDERRPDNIT
VHFSVAADVGSPKPRLRFRGNAQSTYSASVLVPRQRCRTLIVGLPAPVRDRVAALVFSLD
ASVNQKIPKNKDPLQDLGSFPVLSQRSQPVRTQVHIQKSCGSDNRCRSNLQMAAHFTDAE
RQPLSMRSGRQVWSYGGGADRLLLWVNVSNTAEDAHLAVLNVTVPPALVYSGVRTKGGGI
HKVQCSVEGSVVLCELGNPFQSNRMVEVWIIFEASELSCDNREAETLLQMSTLSEQTDLS
PISLSLIIKYSVDMSLTLTHRPGPVPFGGHVPGESAVRTTEDVGPLLIFTFQVHLGGSRR
GDPELTFDWPSQLSNGKRLLYLTEISLNGSAESRCVPPGDVVDPLRLKMGGRRERRSLVQ
EEEVQEDEGAGPGAPVRHFQTNDDKSYVLDCVNGGAKCVRFTCPLPNVKKRASVTLRARL
WKATMLEHYLDARGVLVRGQATLRLGAFNTEAPNTRMEVHVYPYPERRVGSDAPPWIIGV
SVLAGLVLLALICALLWKSGFFVRGDARHRGPIAAPEERDGVSAET
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgttcactttacggtccactttacttttgtgtccattcattctgcaaggagtgt
gtgtgtgcgcgtttgtcttttgtctttcaggccatgtctgcgtgtgtcagcgtctccgtg
gcgacatgcgtgtgtttgttggtgagctcgtgcgcggcgtccaacgtggacacgcgcttc
ccgctggtgaagacgggagcggacggaactttctttggactttccgtggctttgcattct
gacctcaagtcgcgcacgcacctcttattggtcggagctcccagagagcgggcggagccc
gacgtcccggccaatcgaacagggggcgtgtacagctgcccaatcaccgccgacccgtcg
gattgcaggaggctgtcgctcattgaccgagacttggacctgtccgaggacctggttgag
gacatgtggctgggcgtgtcgctcgccagtcaggggccacccgggggacgggtcctggtg
agtccacgcgtggctgacgggatgtcaatttacggcccggcgtgcggtcatcgcttcgtg
aaggtttacggcgcatccaagctcagacacatgataggtcgctgttatctccgtgacggc
gcggacgaccagtggcggtccctcgagcagttgtgcagtcacctgggggacgtgagcaga
gaggtcatgtgcaactcgggaatgtccgctgccatctttcggcgtgacctcattgtcgga
tcgccgggaagttaccaatggcaaggaaacgtccacgtgacctggaccaatcctcgtgtc
atctttgacaccggaaggagttccttcccgaacctccagcgcaggaacatctacttgggc
tattccgtcactcaggctgccggtcttctctctcgggatgacgtcaccatagtaacaggt
gctcccaaggacaccaaagaggacgcccgcggttccgtgctgctggcagtcaaaggcgcc
ggcgccgagctgacggtccggcaaacgctgcgaggagagcagacgggctcgtacttcggg
aacgccgtggctgccgcggacctggataacgacgggtggcaagacctgctggtgggcgcg
cctttttacttccagaggcagcgcggagtgggcggggccgtttacgtatacatgaatgcg
ggggggcgcttccgctcaacggccacgtcggcgctgaaggggccgcccgcttcggcgttc
ggaatggccgtcgcgcacgccggcgacctggacggcgacggcttccaggactttgcggtg
ggcgctccgtttcacggaacgggaagcgtgatgatctggcgcgggagcggcagcggagtc
tccgcccggcccggccaggtgatcagcggaagcagcttgtctcctcgcttgtccactttc
ggcttctccttgtccggcggactggacgtggacgggaacggacatccggaccttctagtc
ggctcgctggacgacaccgccgtcctcctgaggtctcgtccggtgatccacctcaacaaa
accatcagagtgtccccaaatatcgtggagcccaacacttgcgacttttgcatttcggtg
gaggtgtgtttctcgtacacgtggagcagcggcgacgagcgtcggccagacaacatcacc
gtccacttcagcgtggccgccgacgtcggcagcccgaagccccggttgcgtttccgtggc
aatgctcagagcacgtactcggcctccgtgctggttccgcggcagcgctgcagaactctg
atcgtcggactgccggctcctgtccgagaccgcgtggcagccttggtgttctcactggac
gcgtccgtgaaccagaagatacccaagaacaaagaccccctccaggacctggggtccttc
ccggtgctgagccaaagatcccaacccgtcaggacccaggtccacatccagaagtcatgt
ggttccgataaccgttgccgcagtaacctgcagatggcagcccacttcacggacgccgag
cggcagccgctgagcatgcggtctggccgtcaggtgtggtcctacgggggcggtgcggac
cgacttctgctgtgggtcaatgtcagcaacacagcggaggatgctcacttggctgttctt
aacgttacggtcccgccggcactggtgtactcgggagtccggactaagggcggcggcatc
cacaaagttcaatgttccgtggaaggttccgtggttctctgtgagctaggaaaccctttc
caaagtaacaggatggtcgaagtgtggatcattttcgaggcttcagagctcagctgcgac
aatcgggaggcggagacgctgctgcagatgtctacgctcagcgagcagacagacttgtct
ccgatctcgctgtccttgataatcaagtattcggtggacatgtccctgaccttgacccac
cgaccgggccccgtcccctttggcggtcacgtgccgggggagtcggccgtgaggacgacg
gaggatgtgggccctctgctcatcttcaccttccaggtgcacctgggggggagtcgccga
ggagacccggagctgacgttcgattggccgagccagctgtccaacgggaagcggctgctg
tacctgacggagatctcgctcaacgggagcgcagaatcgcgatgcgttccgcccggcgat
gtggtcgaccctctccgcctcaagatgggggggaggagggagaggcggagtctggtgcag
gaagaggaagtgcaggaggacgagggggcgggacccggcgcgcccgtccgtcactttcag
accaacgacgacaagtcttacgttctggactgcgtgaacggcggcgccaagtgcgtgcgc
ttcacgtgcccgctgccgaacgtgaagaaacgcgccagcgtcacgctacgagcgcgattg
tggaaggccaccatgttggagcactacctggacgccagaggcgtcctggtgcggggacag
gccacgctcaggctgggcgccttcaacacagaagcccccaacacacggatggaggtccac
gtttatccctacccggagcgacgggtgggcagcgacgcccccccgtggatcattggggtg
tccgtcttggccggactggtcctgctggccctcatctgtgcgctgttgtggaagagcgga
ttcttcgtgcgcggcgacgcacggcaccggggtcccattgcggcgccggaggagcgggac
ggcgtctccgccgagacctga
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