Syngnathoides biaculeatus (alligator pipefish): 133514322
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Entry
133514322 CDS
T09681
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04144
Endocytosis
sbia04517
IgSF CAM signaling
sbia04530
Tight junction
sbia04810
Regulation of actin cytoskeleton
sbia05100
Bacterial invasion of epithelial cells
sbia05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133514322 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133514322 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
133514322 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
133514322 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133514322 (zgc:86896)
05100 Bacterial invasion of epithelial cells
133514322 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133514322 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133514322 (zgc:86896)
Membrane trafficking [BR:
sbia04131
]
Others
Actin-binding proteins
Arp2/3 complex
133514322 (zgc:86896)
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
133514322 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_HPS5
Rax2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
DUF2694
Beta-prop_IFT122_1st
SH3_3
Motif
Other DBs
NCBI-GeneID:
133514322
NCBI-ProteinID:
XP_061701904
LinkDB
All DBs
Position
16:3052767..3078378
Genome browser
AA seq
355 aa
AA seq
DB search
MSRYTFGLEPLSCHTWNKDRTQIAVSPNNNVVNIYEKKARDWIKIHELTEHSGRITGIDW
AHESNRIVTCASDRNAYVWTLKDGSWKPTLVLVRINRAATCVKWSPLENKFALGSGARLI
SVCYFEKENDWWLSKHIKKPIRSTILSLDWHPNNILLAAGSADLHCRIFSAYIKDIEDKP
GPTAWGAKMPFGEVMFENKDCGGWVHSVSFSPSGDQLAWVAHNSSITVADAALGNEATQL
TIDSLPLLSVLYVSPTEIVAAGHDCCPYQFSYKGPGSLAFVKKLDIPKQSSKSGMSAMQH
FRNLDKKATDDDSNELDTLHQNSITQLCAVKGTDKVEKYSSVGLDGAMVMWEFKH
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggtatacttttggtctagagccactgtcttgccacacctggaataaagacagg
acacaaattgcagtgagtcccaacaacaatgtggtgaacatttatgaaaagaaagccaga
gactggatcaagatccatgagcttactgaacacagtgggcgtatcacaggaattgactgg
gcacatgagtctaatcgcatcgtcacctgtgcttctgaccgcaatgcctacgtgtggact
ctaaaagatggctcgtggaagcccactctggtcctcgtgcgaatcaaccgtgcggcaacc
tgtgtaaaatggtcacctctggaaaacaagtttgcccttgggagtggagctcgactcatc
tctgtctgctattttgagaaggaaaatgattggtggctaagtaagcacatcaaaaagccc
atccgctccaccattctgagcctggattggcatcctaataacattcttttggcagctggt
tctgcggatctccactgcaggattttctcagcctacataaaagacatcgaggacaagcct
ggacccactgcttggggggctaaaatgccttttggggaggtaatgtttgagaataaggac
tgtggaggctgggtgcacagtgtctccttctcccccagtggagaccaactggcctgggta
gcccacaatagcagcatcactgtagctgatgctgcactgggaaatgaggcaacacaactg
accattgacagtcttcccctcctgagtgtcctatatgtgagccctacggagattgttgcc
gcagggcatgactgttgtccctaccaattcagctataagggacccggctctctggcattt
gtaaagaagcttgacattcctaagcagtcttccaagagtggcatgtcagccatgcagcac
ttccgtaacttggataagaaggctaccgatgatgacagcaatgagctggacacactacac
cagaacagcataacgcaattgtgtgctgttaagggaacagataaagtggagaagtacagt
agtgtgggactggatggagccatggtaatgtgggaatttaagcactga
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