Syngnathoides biaculeatus (alligator pipefish): 133514333
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Entry
133514333 CDS
T09681
Symbol
rangap1a
Name
(RefSeq) ran GTPase-activating protein 1a isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133514333 (rangap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133514333 (rangap1a)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
133514333 (rangap1a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
CDC45
SDA1_dom
YL1
BUD22
RNA_pol_Rpc4
Tim54
Merozoite_SPAM
Motif
Other DBs
NCBI-GeneID:
133514333
NCBI-ProteinID:
XP_061701939
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All DBs
Position
16:12644015..12654101
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AA seq
585 aa
AA seq
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MATDIVSQLADSLAKAGVEEGELSYKGQGRKLDDSKSVEEIVKEIKDFEGLQALRLEGNT
VGVEAAKAIAKALETKSQFKRCYWSDMFTGRLRSEIPPALNSLGDALMLASAKLTVLDLS
DNAFGPDGVKGIERLLKSPACYTLQELRLNNCGMGIGGGKILAASLIECHKRSRAEGPPL
SLKVFVAGRNRLENDGATALAESFQLMGSLEEIHMPQNGINHPGVTALATAVQDNPHLRT
LNLNDNTFTEKGAIAMAKALKDLQSIQVINFGDCLVRPLGATAIAQTVSEGLPILKELNL
SFGEISEEAALAVAHAVKNKKQLEKLDLNGNCLGEDGCIALKDLMKGMNMAELLASLSDD
EGEPGDEDEDDEDDDDEEDEEEEEDVDEEEVEEEEEEEEEEDEEEEQDENTGSKFSTPPS
APRPPDVSSFLTFPSPDKLLKLGAKRATLIEQQVDVADARKTAEAFLKIASVYKEDNHEV
KNAVMESVDALLKKAFSTSSFQGYNFVSSLLVLLGLIKSEDKVKPVLVVAGHLQVLEHVV
RQDYFPKESVAVLEAFMSRHNKSLEACGSSRHKLQSTLQRARTES
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagatattgtttcacagttggctgactccttggccaaagctggagttgaggaa
ggggagctgagttataaagggcagggaagaaagctcgatgattccaaatcagtcgaagag
attgtcaaggagatcaaggacttcgaaggtctccaagccctgcgattggagggaaacact
gtaggggtggaggcggcaaaagccatcgccaaggccctcgagacaaaaagccagttcaag
cgctgttactggagtgacatgtttaccggccgcctccgctctgagatcccacctgctctg
aattcactgggcgatgctctgatgttggcgtctgccaagctgaccgttttagacctaagt
gacaacgccttcggcccagacggggtgaagggtatcgagaggttgctgaaaagccccgcc
tgctacactctgcaggaactacggctcaacaactgtggcatgggcattggaggagggaag
atcttggccgcttcactcatcgagtgccacaaaaggtctcgtgcagaaggtccccctctc
agcctgaaagtgtttgtcgctggaaggaatcggctggagaacgacggagccaccgctctc
gcggaatcgttccagttgatgggcagcctggaggagatccatatgccccagaatggcatt
aatcacccaggtgtaacagccttagcaacagcggtgcaggacaatccacacctgcggact
ctcaacctcaatgacaacaccttcactgaaaaaggcgccattgccatggctaaggccttg
aaagatttacaaagcatccaagtgataaactttggcgactgtttggtgcgtccacttgga
gccacagcaattgctcaaactgtttcagaaggattaccaattttgaaggaacttaatctg
tcatttggagagatatctgaagaagcagctctagcggtggcccatgcagtcaagaacaag
aaacaactggaaaaactggatttaaatggtaactgtctgggagaggatgggtgcatagct
ctgaaagacttaatgaaaggcatgaacatggctgagcttctggcatcgctcagtgatgat
gagggtgaaccaggagatgaggacgaagatgatgaagatgatgatgacgaggaggatgag
gaggaagaggaggatgtggacgaagaggaggtagaggaggaggaggaggaggaggaggaa
gaagatgaggaagaggagcaagatgaaaacactggctccaagttttccacgccaccttca
gcgccgcgaccgcctgacgtatcgtcctttctcacctttccatccccggataaactgctc
aagttgggggccaaaagagcaacactaattgagcagcaggtggatgtggccgatgcaagg
aaaacagctgaggcctttctcaaaattgcatctgtgtacaaagaggacaaccatgaagtg
aagaatgcagtcatggaaagtgttgatgcccttctgaagaaagccttcagtacttcttct
ttccaaggctacaattttgtgtcgtctttgcttgtgttgctgggacttattaagagtgag
gacaaggtgaagccggtgctagtggtggctggtcacctgcaggtcttggagcatgttgtc
cgccaggactactttcccaaagagagcgtggctgtgctggaggccttcatgtcccgacac
aacaaatcattggaggcctgtgggtcttctcgacacaagcttcagtccaccttgcagagg
gcccgcaccgagagctga
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