Syngnathoides biaculeatus (alligator pipefish): 133514433
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Entry
133514433 CDS
T09681
Symbol
coro1a
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133514433 (coro1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133514433 (coro1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133514433 (coro1a)
04147 Exosome [BR:
sbia04147
]
133514433 (coro1a)
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Phagocytosis
Coronins
133514433 (coro1a)
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133514433 (coro1a)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133514433 (coro1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
EIF3I
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WDCP
WDR90_beta-prop_4th
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
WD40_RFWD3
NBCH_WD40
Beta-prop_SCAP
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
133514433
NCBI-ProteinID:
XP_061702102
LinkDB
All DBs
Position
16:6090533..6108903
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AA seq
457 aa
AA seq
DB search
MSRQVVRSSKFRHVFGQAAKSDHCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFM
VLPLNKTGRIDMSYPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPDSGLISPL
TLPVVKLDGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVARGEEVIRIDDVHSDLIYS
ACWNRDGSKILTSCKDKMMRVIDPRKGTVLSEKEKPHEGSRPVRAVWVSDRRILTTGFSR
RSERQVALWDPEDFGSPLTLEELDTSSGVLLPFFDPDTSMVYLCGKGDSSIRYFEVTEEA
PYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIIMTVPRKSDLFQE
DLYPDTVGPEPSAEADDWFGGKDAPPILISLKDGFVATTKAKEFKVHKSLLKTTVAPTGI
TNVDGGGDVSALRRELKALKASLEELSIRVSSLESKH
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcaggtggtgcggagcagcaagttccgacacgtcttcggccaggcggccaag
tctgatcactgctatgacgacatccgcatctcccagatgacatgggacagcaacttttgc
tctgtcaaccctaagttcgtggccatgatcgtggacgccagcggtggtggggcattcatg
gtgctgcccctcaacaagaccggtcgtatcgatatgtcctacccaaccgtgtgtggccac
acgggtcccgttctggacatcgagttttgcccccacaatgacaacatcatcgccagcggc
tctgaggactgcagtgtcatgatttgggagatcccggactctgggctgatctcaccactc
acgctgccagtggtgaagctggatggccactccaagcgtgtgggcatccttagctggcac
cccactgcccacaatgtcctcatgagtgcaggctgcgacaacgtggtgattctgtggaat
gtcgctcgcggcgaggaggtcatcaggattgatgatgttcactctgacctgatctacagt
gcctgctggaaccgggacggctccaagatcctgacctcctgcaaggacaagatgatgcgg
gtgatagaccctcgcaagggcaccgtcctctccgagaaggagaaaccacatgagggctcc
aggccggtccgggctgtgtgggtttctgacaggaggatccttaccaccggatttagtcgc
aggagcgagaggcaggtggcgctatgggacccggaggactttggctcaccactgaccctg
gaggaactggacaccagcagcggcgtccttctaccattcttcgacccggacacaagtatg
gtctacttgtgcggcaagggcgacagcagcatccggtacttcgaggtgacggaggaggca
ccctacgtgcactacctgtccatgtacagcagcaaggagagccagaagggcatgggctac
atgcccaagaggggcctggaggtgaacaagtgcgagatagccaggttctacaaactccat
gagaggaagtgtgagcccatcatcatgacggtgcccaggaagtccgacctgttccaggaa
gacctataccccgacactgtaggtccagaaccatcggctgaagctgatgattggtttgga
ggcaaagatgctccccccatcctcatctcactcaaagatggcttcgtcgctaccaccaag
gccaaagagttcaaagttcataagagcctcctcaagaccactgtggcccccaccggcatc
actaacgtagatgggggaggggatgtgtcggctctgaggcgggagttgaaggctttgaaa
gcgtcactggaggagcttagcattcgtgtgagctcactagagagcaaacattaa
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