KEGG   Syngnathoides biaculeatus (alligator pipefish): 133514568
Entry
133514568         CDS       T09681                                 
Symbol
kdm5c
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sbia01009]
    133514568 (kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sbia03036]
    133514568 (kdm5c)
Enzymes [BR:sbia01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     133514568 (kdm5c)
Protein phosphatases and associated proteins [BR:sbia01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     133514568 (kdm5c)
Chromosome and associated proteins [BR:sbia03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    133514568 (kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD BREX_BrxC_helical PHDvar_NSD
Other DBs
NCBI-GeneID: 133514568
NCBI-ProteinID: XP_061702363
LinkDB
Position
2:29827676..29850182
AA seq 1310 aa
MEGEEFIAPPECPVFEPSWEEFQDPLGYIAKIRPIAEKSGICKIRPPPDWQPPFSVELDT
FRFTPRIQRLNELEAETRVKLNYLDRIARFWEIQASSLKIPHIERRILDLFGLSKVVSDE
GGFEMVCKERRWARVAQRLGYPPGKNIGSLLRSHYERIVHPFEMFQSGASLPHCKPKHYD
GEDVDKEYKPHSIPLRQSVQPSKMSSYGRRANRCQPDGPEDLNPHPLTAGSQLISAPEPT
EEDIEKNPELKKLQIYGAGPKMMGLGLVARDRGFRKKDELPQTVTIKDSTASSPDVTSVN
GEPPVPLERQSDGRSASPQISPVSITVKTEVKTEIKTEVKAEGKTEVKKEELAEHLLKES
RQHLKDGPCTKMTMRLRRTLNNMQSVDSFVCRMCGRGDDDDKLLLCDGCDDNYHTFCLLP
PLTDPPKGNWRCPKCVAEECKKPSEAFGFEQATREYSLQSFGEMADAFKADYFNMPVHMV
PTELVEREFWRLVSSIEEDVTVEYGADIHSKEFGSGFPMNNGKRILTKEEEDYARSGWNL
NVMPVLEQSLLCHINGDISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYG
VPSVAAERLEEVMKKLTPELFEYQPDLLHQLVTIMNPNILMAHGVPVVRTNQCAGEFVIT
FPRAYHSGFNQGYNFAEAVNFCTADWLPAGRSCIEHYRRLRRYCVFSHEELTCKMAASPE
KLDLNLAAATHREMFIIVQEERKLRKALMERGISEAEREAFELLPDDERQCDKCKTTCFL
SALACSNCPERLVCLYHTQDLCNCPTDKLYLRYRYTLDELLAMLHRLKVRSESFDSWANK
VKEALEQEEGNKIGIDYLEVLKTEAAEKKFPDNELLRKLNTVLKDVEYCQRKSTELLTHS
TASDEKMTLVELKSLIEAMQNLPCVMTQLDEVQAVLQTVSEYQRRAQELVNERDWRRNAA
PTELLESLLEQGTKLPVVVPECNLLQGLQELGRWLAEVRHTLGTEGDERPEVTLAVLRKL
IEAGCDVPQSASVDTAMAELQELLTIAERWEEKAQICLEQRQKHPLSTLEAIVNEAQLIP
VKLPNIQALQGCLSRARAWVTDLEEIQNGEHYPCLDDLEGLVAVGRDLPVVMEELRQLEV
QVASAHSWRDKASKTFLKKTSQHSLLEVLCPCAKRRHDKTEDLDDCDTNTLGLSAQDLRD
PAAIVMAFKEGEHREKEALLRLQKVNMGKTGLNSGGYKEVMGTSDDRIKTDSENCVRENG
GHPSATFSQSVCVCAGQAGHAAVALPPLQGLVPRRLRFLPHAASALRTAN
NT seq 3933 nt   +upstreamnt  +downstreamnt
atggagggagaagagtttatagctcctccggagtgtccagtttttgagccgtcatgggag
gagttccaggatcctctgggctacattgccaaaatacgtccaattgcagagaagtctgga
atctgcaaaattcgccctccgccagactggcaaccaccattttcagtggagctggacaca
ttccgattcacgccgcgcatccagaggctgaatgagttggaggcggagaccagagtgaag
ctcaattatttggaccgcattgcaaggttctgggagattcaggcttcctccttgaagatc
ccgcacatcgaaaggcgtatccttgatcttttcggtctgtcaaaggtcgtgtccgacgaa
ggcggttttgagatggtctgcaaagaacgacgttgggcccgtgtggctcagaggcttggc
taccctccaggcaagaacatcggttctcttctgcgctcgcactacgagaggatcgtccac
ccttttgaaatgttccagtctggtgctagcttaccgcattgcaagccaaagcactacgac
ggcgaggatgtggataaggaatacaagccccactccatccccctgcgtcagtctgtgcag
ccatccaagatgagcagttacggccgtcgcgcaaaccgctgccagccagatggtccagag
gatctgaacccccatcctctcaccgctggctctcaactcatctcagcgcctgaacctact
gaggaagacattgagaagaacccagagttgaagaagttgcagatctatggcgcagggccc
aagatgatgggacttggactggtggcgcgggaccgaggctttaggaagaaggatgaactt
cctcagactgtgaccattaaggacagtacagcatcttctcccgatgtcacttctgtaaat
ggggagcctcctgttcccctggagagacagagcgacgggcgctcagccagtccccaaatc
tcccccgtcagcatcaccgtcaagacggaggtcaaaacggaaatcaagacagaagtcaaa
gctgaagggaagactgaagtgaagaaggaagaattggctgagcatcttcttaaagaaagt
cgtcaacatcttaaagacggtccctgcacgaaaatgaccatgaggctacggcgcaccctc
aacaacatgcagagtgtggattcctttgtctgtcggatgtgcggccgcggagatgatgac
gacaaactcttgctatgcgacggttgtgacgacaactaccacacgttctgcctgctgccc
ccgctcactgatccacccaaaggcaattggcgatgcccgaagtgtgttgcagaagagtgt
aagaagccttctgaagcatttggtttcgaacaagcaacccgcgagtacagtttgcagagt
tttggggagatggccgacgcattcaaagcagattacttcaacatgcccgtccacatggtt
cccactgagcttgtggagagagagttctggaggttagttagcagcatcgaggaggacgtc
accgtggagtacggagcagacatccactccaaagagttcggcagcggcttcccaatgaac
aacggcaagaggattctgacaaaggaggaggaggactacgcccgcagtggctggaacctg
aacgtgatgcccgtgctggaacagtccctcctgtgccacatcaatggggatatctctggc
atgaaagtgccctggctttacgttggcatggtgttctccgctttctgctggcacattgag
gatcattggagctactccatcaactacctgcactggggcgaacccaaaacctggtacgga
gttccctcagtagctgccgagcgactagaggaggtgatgaagaaattgactccagagtta
tttgaatatcagcctgacctcttgcatcagttggtcacaatcatgaatccaaacatcctt
atggctcacggcgtacctgttgtgcggaccaaccagtgcgctggtgagtttgtcatcacc
ttccccagagcctaccacagtggcttcaaccagggatataattttgcagaagccgtcaac
ttctgtactgcagattggcttcctgccggtcgttcctgcattgagcactaccggcgtctg
cggcgatattgcgtcttctctcatgaagagctcacctgtaaaatggcagccagcccagag
aaactagacctcaatcttgcggcagcgacgcacagggaaatgtttataattgtccaggag
gagcgaaagctgcgtaaggctctgatggaaaggggcatcagcgaagcggagcgggaggcc
tttgagctgttacctgatgatgagagacagtgtgacaaatgcaagacgacttgtttcctc
tcggcactggcttgttcaaactgccctgagcgtctagtgtgtctctatcacactcaggat
ttgtgcaactgccccactgacaaactctacctcaggtatcgatataccctggatgagtta
ttggccatgttgcaccgcttaaaggtccgctcggagtctttcgattcgtgggccaacaaa
gtaaaagaggcacttgagcaagaggagggaaacaagatcggtattgattacttggaggtg
ctcaagaccgaagcagcggaaaagaagttccctgacaatgaacttctgcgtaaactcaac
actgttctcaaagacgtcgagtactgccaacggaagagcacagaactcctcactcactcg
acagccagtgatgagaaaatgactttggtggagctgaaatccttgatcgaggcaatgcaa
aatctgccctgtgtgatgactcaactggacgaagtgcaggcggttctgcagacggtgagc
gagtaccagaggcgagctcaggagctggtcaacgagcgcgactggaggaggaacgctgca
cccacagagctgctggagtccttgctggagcagggaactaagctccctgttgtggtgccg
gagtgtaacctgctccagggcctccaggagctgggccgctggctggcagaggtcaggcac
accttgggcacggagggggacgagaggccggaggtcacgttggcggtgttgaggaaactg
atcgaggcgggttgcgacgtgcctcagagcgcttccgtcgataccgccatggcagaactg
caggagctgctcacgattgcggaacgttgggaggagaaagcgcagatctgtcttgagcaa
aggcaaaagcaccctctctcaacactggaggcgattgttaatgaggcccagcttatccct
gtcaagttgcccaacattcaagctttgcagggctgcttaagccgcgcacgtgcttgggta
acagacctggaggaaattcagaatggggagcattatccatgtctggatgacctggagggg
ttggtggctgttggaagggacttgcccgtcgtcatggaggagctgcggcagctggaagtg
caggttgccagtgctcactcttggagggacaaggccagcaagaccttcttgaagaagacc
agtcagcacagtctgctcgaggtgttgtgtccatgcgctaaaaggagacatgacaagacc
gaggacctcgacgactgcgataccaacactctgggtctctctgctcaagacctccgggac
cctgcagctattgtcatggcgttcaaagaaggggagcaccgggagaaggaggccctgctg
aggttacagaaggtcaacatggggaagactggacttaattcgggaggttacaaagaggtg
atggggacatcggacgaccgtataaaaacagactctgaaaactgtgtcagagagaacggg
ggccaccccagcgctaccttttctcagtcggtgtgcgtgtgcgccggtcaggccgggcac
gccgcagttgcgctgccacctttgcaaggactggttccacggcggctgcgtttccttccc
cacgctgcttccgccttgcggaccgccaattaa

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