Syngnathoides biaculeatus (alligator pipefish): 133514668
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Entry
133514668 CDS
T09681
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04020
Calcium signaling pathway
sbia04080
Neuroactive ligand-receptor interaction
sbia04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
133514668
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133514668
04082 Neuroactive ligand signaling
133514668
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133514668
Ion channels [BR:
sbia04040
]
Ligand-gated channels
Glutamate (ionotropic)
133514668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
133514668
NCBI-ProteinID:
XP_061702487
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All DBs
Position
16:complement(12015613..12141780)
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AA seq
1699 aa
AA seq
DB search
MRVWPTKRKVFLSHTSAMPVSGCPSPLRIHAGVCTYTPSQGRRVRHLHPALPPLLHCHPV
SLGVLLLLLCLLHLPPTCHSRREKGGGGGGGHYIPIPPPPPHHMALPNILRGLSIAVVLV
GNSSEMALAGAREKEDFLHMAPNVEILTMNETDPKSIIKSICDLMTQHWLQGVVFGDDTD
QEAIAQILDFISAQTHIPILGVRGGSSMIMAAKDDDSMFFQFGPSIEQQASVMLNIMEEY
DWYIFSIVTTYYPGYQDFVTKIRSTIENSFVGWELEEVLLLDMSVDDGDSKIQNQLKKLQ
SPVILLYCTKEEANTIFEVAHSVGITGYGYTWIVPSLIAGDTDVVPAEFPTGLLSVSYDE
WDYGLEARVRDGVAIITMATSTMMMDRGPHTLLKSECHGAPDKKTPISGNPNEVLRYLMN
VTFEGRNLSFSEDGYQMHPKLVIILLNKDRQWDRVGKWENGSLSMKYHVWPRYELYGGVA
AREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQIKTLNQTKESGIYIKRCCKG
FCIDILKKIAKSVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTINEER
SEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLLVSAFAVFIFEY
FSPVGYNRCLADGREPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFA
VIFLASYTANLAAFMIQEEYVDQVTGLSDKKFQSPNDFSPPFRFGTVPNGSTERNIRNNY
AEMHSYMTKFHQRNVNEALQSLKAGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFAT
TGYGIAIQKESLWKRHVDLAILQLFGDGEMEELESLWLTGICHHEKNEVMSSQLDVDNMA
GVFYMLGAAMALSLITFICEHWFYWQLRFCFMGVCSGRPGFVFSISRGIYSCIHGVQIEE
KSSSALNSPSATMNNTHSNILRLLRTAKNMASGVNGSPHSALDFIRRESSVYDISEHRRS
LAGHSDCKPPYLPEDNMFSDYISEVERTFGSVHMKDSNLYQDHYLHHHGSTLGLSGPPPN
RPHSLGSASSLEGGMFDCDSLGGGVPPIFTTQPCSALTHRNMSKFDLLSGQTPPTGQGFK
SGLPDLYGKFSFKGGASSSTYIPGPSYCGGRGDDDGNIRSDVSDISTHTVTYGNLEGNAK
KRKQYRDSLKKRPASAKSRRELDEIELGYRRKPYHISHHHYHNHRSASPPLLPSERKRGG
GVNNDTNYLFREKESVRDFYLDQFRPKEGVPQWEHVDLTEGPGNRDSGVPTCTSLVPVED
FLKSKPKKSDSKSVGGSGLAGGDWECRNCRSGGGVKQMSMHGAGIGGGYGGGISCGSSGG
GGSSRPSSATCMRCEGCKKTGNLYDISEDNNHLLEQIGGGKGVGGGGMGAILQPQSQAQQ
RRKGGGFGKPLRRQHSYDAFVDLQKDDSSGIGSVMGGMGGVGGMSGPGMGGMLPPPRSVS
LKEKERYMEGTSPFAHIFERHGGSERERERDRDPSFYGGEGRFGGLFRGGEGLHRRSVGE
RDMRDRERSLMEGGGGASFSLSKSLYPDRVNQNPFIPTFDDDQCLMHGAKQYYMKKQQQQ
QQVAKNSRSDFRSQMSTTSYLPVSATAGVMSNVSPRFPKELSLGGLNHHGSMLGVGPPRP
FDGSNGHVYEKLSSIESDV
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgagagtttggccgacaaaacgcaaggtatttctctcacacacctccgccatgcctgtc
agcggctgcccttccccccttcggatccatgcaggggtctgtacctacaccccctcgcaa
gggaggcgagtccgacacctccatccagccctgcccccgttgctgcactgccaccctgtc
tcactcggtgtccttctcctgctgctctgccttcttcacctgccccccacctgccactcc
cggagagagaagggaggcggaggaggtggcggccactacattcccatccctccgccccct
ccccaccacatggctctgcccaacatcctgcgtggcctaagcatcgccgttgtcctggtg
ggcaactccagtgagatggcactggcgggtgctcgggagaaggaagactttctacacatg
gcgcccaacgtagagatcctgaccatgaatgagacggaccctaaaagcatcataaaaagc
atctgcgacctaatgacgcagcactggctacaaggcgtggtgtttggagatgacaccgac
caggaggccatcgcgcagatcctggacttcatttcggcccagacccacatccccatcctc
ggagtccgcgggggttcgtccatgatcatggctgctaaggacgacgactccatgttcttt
cagtttggcccctccattgagcagcaagcctcagtcatgctcaacataatggaggaatat
gactggtacatcttctccatcgtcaccacatattacccggggtaccaggactttgtcacc
aagatccggagcaccatcgagaacagttttgtgggctgggaactggaggaggtgttgctt
cttgacatgtctgtagacgacggcgattcaaagattcaaaaccagctaaagaagctccag
agtcccgttattcttttgtactgcacaaaagaagaggccaacaccatttttgaagtggcc
cattctgtcgggattactggttatggctacacgtggatagtgccctcactcatcgctgga
gacactgacgtagtacctgcagagttcccaacagggctgctgtcagtttcctacgacgag
tgggactacggcctggaggcccgcgttcgcgatggagtggccattataaccatggcaaca
tccaccatgatgatggaccgaggacctcacaccttgctcaagtccgagtgccacggagct
cctgacaagaagacccctatttcgggcaatcccaatgaagtcctcaggtacctaatgaat
gtaacgttcgagggtcgtaatctttcgttcagtgaggacggctaccagatgcaccccaaa
ctggtcatcattctgctcaacaaggacagacagtgggacagggtgggcaaatgggagaac
ggttcgctttccatgaagtaccacgtgtggcctcgctatgaactctacggtggggttgca
gccagggaggatgaccacctgtccattgtgacgctggaggaggcccctttcgtcatcgtg
gaagacgtggacccgcttagtggcacttgcatgaggaacaccgtgccctgccgcaagcag
atcaaaacattgaatcagacaaaggagtcagggatctacatcaagcgttgctgtaagggc
ttctgcattgacatcctgaagaagatcgccaagtcagtcaagttcacatatgacttgtac
ctcgttacgaatggcaaacatggcaagaagatcaatggaacctggaacggcatggtggga
gaggtggtgttaaaaaatgcccacatggccgttggttctttgaccatcaacgaggaaagg
tcagaggtcatcgacttctccgtccccttcatcgagaccggcatcagcgtcatggtctca
cgtagcaacggcaccgtttcaccctctgccttcttagagcccttcagtgcggatgtgtgg
gtgatgatgttcgtgatgctgttgctggtgtcagcatttgccgtgttcatatttgagtac
ttcagccctgtgggctacaaccgttgtctggctgacggcagagagccacatggtccgtcc
ttcaccattggcaaagccatctggttgttgtggggtctggtgttcaacaactctgtgccg
gtgcagaaccccaaaggtaccaccagtaagatcatggtgtcagtgtgggccttctttgcc
gtcatctttttggcctcctacactgcaaacttggctgccttcatgatccaggaggaatac
gtggaccaggtaacgggactgtcggataaaaagttccaaagtcccaacgacttctcgcct
ccttttcggtttggcacggtcccaaacgggagcacagagagaaacataaggaacaactat
gcagagatgcactcctacatgaccaagtttcatcagagaaatgtcaacgaggctcttcag
agcctcaaagctggtaaactagacgctttcatttatgacgcggccgtgctgaactacatg
gctggcagggacgagggctgcaagctggtgaccatcggcagtggctacatcttcgccacc
accggctacggcatcgccatccagaaggagtctctctggaagaggcacgtggacctggcc
atcctgcagctcttcggagacggtgagatggaggagctggagtcgctgtggctgacggga
atctgccaccacgagaagaacgaggtgatgtccagtcagctagacgtggacaacatggcg
ggggtcttctacatgctgggggccgccatggcgctgtcgctcatcacgttcatctgcgaa
cactggttctactggcagctgcgtttctgcttcatgggtgtctgctcgggtcgccctggc
tttgtcttttctatcagcaggggcatctacagctgtattcacggtgttcagattgaagag
aaaagcagctcagcattgaactccccatcagctaccatgaacaacactcattccaacatc
ttgcgcctcttacgtaccgccaagaacatggcctccggggtgaacggctcgccacatagc
gctctggacttcattcgacgcgaatcttccgtttatgacatctcggaacacagacgcagc
ctggcaggccactcggactgcaagccaccttacttaccagaagataacatgttcagtgac
tacatcagcgaggtggagaggacttttggcagtgttcacatgaaggacagtaatctgtac
caggaccactacctgcaccatcacggttccacacttgggctcagtggaccgcctcccaac
aggccccatagtttgggcagtgccagttccctggagggtggcatgtttgactgtgacagc
ctcggaggcggggtgccacccattttcaccactcagccatgctcagcactgacccacaga
aacatgagcaagtttgaccttctgtctggacagactccacccactggccaaggcttcaag
agtggcctgcctgacttgtatgggaagttttctttcaagggaggtgcttcaagttccacc
tacatccccgggcctagttattgtggagggagaggggatgacgatgggaatatacgatct
gatgtgtctgatatttccacacacacagtaacctatgggaacctggaaggtaatgcaaag
aagcgcaaacaataccgtgatagcctgaaaaagagaccagcctctgccaaatccagacgg
gagctggatgagattgagttgggctacaggagaaaaccttatcacatcagccaccaccac
taccacaaccatcgctctgcctcaccaccacttttgccatctgaacgtaaacgaggcgga
ggagtaaataatgacacaaactatctcttcagagaaaaggagagtgttagggacttttat
ttagaccagttccgcccaaaagagggtgtccctcagtgggaacatgtagatctgactgag
ggccctgggaacagagatagtggagtaccaacttgcacatctctggttccggtggaggac
tttctcaagagcaagcccaaaaagtctgactcaaaaagtgtcggaggttccggcttagcg
ggaggtgattgggagtgcaggaactgtcggtctggaggaggagtaaagcagatgtccatg
cacggagcagggattggtggtgggtatggtggtggtataagctgtgggtcctcggggggt
ggaggaagcagtcgcccaagctctgcaacctgtatgcgctgtgagggctgtaaaaagaca
ggaaacctctatgacatcagtgaggacaacaaccacctcttggaacagattggtggaggg
aaaggtgtggggggaggaggcatgggtgcaatcctccagccacaatctcaggcccagcag
aggagaaagggtggaggatttggaaagccactcaggcggcagcattcgtatgatgcgttt
gttgaccttcagaaagacgactcgagcggcatcgggagtgtgatgggaggaatgggtgga
gttggcggaatgagcggtccaggtatgggaggaatgctgccacctcccagaagtgttagt
ttgaaggagaaggagcgctacatggagggcaccagcccctttgcacacatatttgagcgt
cacggaggctctgagagagagagggaaagagacagggacccttcgttttatggaggtgag
ggccggttcgggggcctgttcagaggaggcgagggtctccatcgtcgctcagtaggggag
agagacatgagagacagggagaggtccttgatggaaggtggaggtggggcatcattctct
ttatccaaatctctttatcctgaccgtgtcaaccagaacccctttatacccacgtttgat
gacgaccagtgtctcatgcacggagccaaacaatattacatgaaaaagcaacagcagcag
caacaggttgccaaaaacagccgaagtgacttcaggagccagatgagcacgacttcttat
ctgccagtatctgccacggctggagtcatgtcaaacgtgtccccccgtttcccgaaagag
ctcagcctaggtgggctgaaccaccatggctccatgctcggggtcggcccgccgcgaccc
ttcgatggaagcaacggccacgtctacgagaaactgtccagtattgagtcggacgtgtga
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integrated database retrieval system
