Syngnathoides biaculeatus (alligator pipefish): 133514737
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Entry
133514737 CDS
T09681
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04120
Ubiquitin mediated proteolysis
sbia04137
Mitophagy - animal
sbia04144
Endocytosis
sbia04340
Hedgehog signaling pathway
sbia04350
TGF-beta signaling pathway
sbia04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133514737 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
133514737 (smurf1)
04350 TGF-beta signaling pathway
133514737 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133514737 (smurf1)
04137 Mitophagy - animal
133514737 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
133514737 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133514737 (smurf1)
04121 Ubiquitin system [BR:
sbia04121
]
133514737 (smurf1)
03029 Mitochondrial biogenesis [BR:
sbia03029
]
133514737 (smurf1)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133514737 (smurf1)
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
133514737 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
133514737 (smurf1)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
HECT type E3
133514737 (smurf1)
Mitochondrial biogenesis [BR:
sbia03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
133514737 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
133514737
NCBI-ProteinID:
XP_061702631
LinkDB
All DBs
Position
16:14901959..14924416
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKADSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVLEGCFSEEPLPYSDPTGA
AGGGNCRLDSPSQENRLQSQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISQQSQVKESSQPPQMDVGVEEGGVGGMGGGVGGDGDVAARYERDLVHKLKLLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHGHYI
NGSFTLPFYKQLLGKPIQLNDLETTDPELHKSLIWILENDITSVLDHTFCVEHNAFGKFL
QHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFDHK
ELELIIGGLGKIDLADWKTNTRLKHCTSESNVVRWFWQAVEAFSEERRGRLLQFVTGSTR
VPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcggaggaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctagcaaagaaagacttctttcgtctccccgatccttttgccaaggtt
gtggtggacggatcaggtcaatgccactcgacagacacagtcaagagcacactggacccc
aaatggaatcagcactacgacctctacattggaaaagcagactcgatcaccatcagtata
tggaaccacaagaagatccataaacggcaaggggcaggcttcttagggtgcattagactt
ctttcaaacgccatcagcagactaaaagacacgggataccagcggctagatctttgtaaa
ctgaacccctcagacagtgacgcagtgcggggacagattgtagtgagcctgcagacacga
gaccgcataggtagcggaggccctgtggtggactgtcgaggtctattagaaaatgatggg
cctgtgttagagggatgtttcagtgaagaaccgctgccttattccgaccccactggtgcc
gcgggtggcgggaactgccgtctcgactcacccagtcaagaaaaccgtcttcagtcccag
cgaattcgggggcaggattcccgaggccatggccacacccctcagaacagacctcacggg
caccaaccgcctgacctgcctgaaggatatgagcagcgaacaacagtgcagggccaggtg
tacttccttcacacacagacaggtgtcagcacttggcatgaccctcggataccaagggac
ctggccagtgtaagctgtgaggagcttggtcccttgccagtgggctgggaggtccgaagc
accgtgtccggacgcatttactttgtggaccacaataaccgaaccacacagttcacagac
ccccgtctacataccatcatcagccagcaatcccaagtgaaggaatcctcacaacccccc
cagatggatgtgggggttgaggagggcggagttggtggaatgggcggtggtgtcggtggt
gacggggatgtggcggcgcgctatgaaagagatttggtccataaactgaagctgctacgt
cacgagctttccctgcagcagccccaagcgggacactgtcgcatcgaggtatctcgtgaa
gagatatttgaggagtcgtatcggcagataatgaagatgaggcccaaagatctgaagaag
cgtctcatggttaaattcagaggggaggaaggcctggactacggcggcgtggccagggag
tggctgtacctgctgtgtcatgaaatgttgaacccttattacggcctcttccaatactcc
actgacaatatctacacattacagatcaaccccgactcctccattaacccagatcaccta
tcatatttccactttgtgggccgcgtaatggggctggcagtttttcatggtcactacatc
aacgggagcttcacgctgcccttctacaaacagctgctcggcaaacccattcagctcaat
gacctggagaccaccgacccagagttgcacaagagtctcatctggatattagagaacgac
atcacttcggtcctggaccacacattctgtgtggagcataatgcctttggaaagttccta
caacatgaactcaaacctaatggccgtaacatccctgttactgaggagaacaagaaggaa
tatgtcaggctttatgtgaactggaggtttatgcgaggaattgaagcccagtttctggca
ctccagaagggatttagtgagcttatcccccaacatctcctcaaacctttcgaccataaa
gaacttgagctgatcatcggcggattggggaaaatcgacttggctgactggaagaccaac
acgcgccttaagcactgtacaagtgagagcaacgtggtgcggtggttctggcaggcggtg
gaggcgttcagtgaggagaggagaggacgcttgctgcaatttgtcacgggctccacccgg
gtccctttacagggcttcaaagcactgcagggctctacaggttctgcaggaccaagactt
tttaccatccatttgatagacgccaacactgacaacttgccgaaggcacacacatgtttt
aacaggatagacatccccccctacgagtcttacgagaaactttacgagaaactgctgact
gccgtggaggagacatgtggcttcgctgtggagtga
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