Syngnathoides biaculeatus (alligator pipefish): 133514804
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Entry
133514804 CDS
T09681
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04120
Ubiquitin mediated proteolysis
sbia04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133514804 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
133514804 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133514804 (mgrn1b)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133514804 (mgrn1b)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133514804 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
133514804
NCBI-ProteinID:
XP_061702764
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Position
16:20487911..20496233
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AA seq
546 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTPVEEGGKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKDASMASETVHYKRGVSQQFSMPSFKIDF
SEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSGTDSVPP
GFEPVSLLEALNGLRSVSPAVPSAPLYEDVNFSGSDGGRQLSSPEHLSDGGLQKGKVSKS
PDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTDATATEDVADSLSPDEEDRMH
AGDILQDCASERSSLTKTERDPSGELSLPGSSESTESLKSQSTNCSSQPLLCPSGSFHRE
DEHLLP
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgggctccatcctgagtcgcagaatcgccggggttgaggacatcgacatccaagctaat
tcggcttatcgcttccccccgaaatccggcaactattttgccagtcactttttcatggga
ggggagaagtttgacacgccacatcccgagggatacctctttggggagaatatggattta
aatttcctaggaaataggccagtgcagttcccctacgtcacgcccgcaccccacgaacct
gtgaaaacgctcaggagtctcgtgaacattcggaaggactcgttgcgtttggtcaggtat
aaagacgactctgacacgccggtggaggagggcggcaaaccaaaggttcagtacggcgtg
gagttcacctttgacgcagacgctcgcgtggccatcaccctctactgtcaggccttcgag
gaattctccaatgggatggctgtgtacagtccgaaggatgcgtccatggcatcggagacg
gtccactacaagaggggcgtcagccagcagttctccatgccctctttcaagatcgacttc
agcgagtggaaggaggaagacctcaactttgacctggaccgaggggtgttccccatggtg
atccaagccgtggtcgacgaaggggacgactgcctcggacacgcgcatgttcttttggca
gcctttgaacgacatgtcgacggcagtttctccgtcaagccactgaagcaaaagcaaatt
gtggaccgcgtgagctacctcttgcaggagatctacggcatcgagaacaagaacaaccaa
gagacaaagccgtccgacgacgagaacagcgacaacagcaacgagtgtgtggtgtgtttg
tcggacctgcgggacacgctcatcctgccctgcagacatctctgtctctgcaactcgtgc
gccgacaccttgcgctaccaagccaacaactgccccatctgcagactgcccttcagagcc
ttgttgcagatccgagctgtgcggaaaaagcccggggcgctctcacccgtctccttcagt
cctgttctggcgcagacgatggaccacgacgagcactctggcaccgactcggtcccgccc
ggcttcgagcccgtctctctgttggaggccctgaacgggcttcgctcggtgtcgcccgcc
gtaccctcggcgcccctctacgaggacgtcaacttctcgggcagcgacggcggccggcag
ctgagctcccccgagcatctcagcgacggcggtctgcagaaaggcaaagtcagcaaatca
cctgacagcacgctgaggtccccgtcgtctcccatccaggaagaggacgaagagaagctg
tcggagatgtcggacgctcagccgcacacgctcctgtccagcagtcccgcccccacggac
gccacagccaccgaggacgtagcagactcgctgtccccggatgaggaggacaggatgcac
gccggcgacatcctccaggactgcgccagcgaacgcagcagcttgaccaaaacggagcgc
gacccctcgggcgagctgtcgttgccagggtcgtccgagtccacggagagcctgaagagt
cagagcacaaactgctccagccagcctctcctgtgcccctccggcagcttccaccgagaa
gacgagcacctcctcccctga
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