KEGG   Syngnathoides biaculeatus (alligator pipefish): 133514843
Entry
133514843         CDS       T09681                                 
Symbol
kdm5bb
Name
(RefSeq) lysine-specific demethylase 5B-B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sbia01009]
    133514843 (kdm5bb)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sbia03036]
    133514843 (kdm5bb)
Enzymes [BR:sbia01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     133514843 (kdm5bb)
Protein phosphatases and associated proteins [BR:sbia01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     133514843 (kdm5bb)
Chromosome and associated proteins [BR:sbia03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    133514843 (kdm5bb)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHDvar_NSD PHD-1st_NSD PHD_2
Other DBs
NCBI-GeneID: 133514843
NCBI-ProteinID: XP_061702851
LinkDB
Position
2:complement(30287995..30310068)
AA seq 1545 aa
MSQPRPDEFKPPPECPVFEPSWEEFADPYAFINKIRPIAEKTGICKVRPPQGWQPPFACD
VDRLHFVPRIQRLNELEAQTRVKLNFLDQIAKFWDLQGCSLKIPHVERKILDLYQLNKLV
AEEGGFNIVCRDRRWTKIAMQMGFAPGKAVGSHLRGHYEKTLYPYNLFQSGANLLTPEAS
SKLMCLEAYPDLQKCVQKAAHPEDSPGNVDHVDNAEPKLQEALQRQPLQTADSCPNARRG
KRTKYESVSVKPEPGEPGENRPNLRRRMGSFVAKPEPEKEIPIQVKQEPAEVKEAVVEED
KFKQRYKKYIPSLPPNPVDLVVCLVCGSGGDEDRLLLCDGCDDSYHTFCLIPPLTDVPRG
DWRCPKCLAQECSKPHEAFGFEQAYRDYSLRAFGQMADAFKSDYFNMPVHMVPTELVEKE
FWRLVGAIEEDVTVEYGADIASKEFGSGFPIPNGKFKVSPDDEKYLKCGWNLNNMAMMNP
SVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQ
LEEVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVVTFPRAYHSG
FNQGFNFAEAVNFCTVDWMSLGRQCVNHYRILHRYNVFSHDEMVCNMAAKAEALDVVLAS
AVHKDMAAMILEEQELREKVSKMGLVHWQEAKYDHLQDDERQCAKCRTTCYLSAITCPCS
PGVLVCLHHISDLCSCPVTNYTLNYRYTLEDLLPMMNASKQRAEQYDAWASRVSETLEAK
LEKKKGLPVLRSLLAESESERFPENDLLRRLRLVTQDAERCSSLAQQLLNRKRQTRYQCG
IGKSRSQLTVEELSSFVRQLYNLSCSLTQAPLLKELLNRIEDFQQHSEKLLADESPSVAE
IQSLLDVSFEFDVDLPELPRLRERLEQARWLEGVEQAFIQPGTLTLETMRRLIDQGVGLA
PHSSVEKALAHLQELLTVSEHWEDKASSLLKARPPHSIETLSAAADEVSGISSHLPNCLL
LKDTIRKALEWLQEAEEFQANDCVLMVDNLSDMVLRGQAIQVHLEPLDRLEYLMAEVRGW
KESAASVFLQKDTACTLLETLCPRCEVGNEGSPKRKAKKGKELPKNNKKKTTRLNTASDV
EKALSEAKDSASVNATLEALRVREMEAFCHLRVANESKLLPTADCTDLKVCVCQKALMGA
MVQCELCRDAFHSVCVRDWSDLGDAPPWLCPRCQRSRKPPLNKVQPLLASLRRIRVRLPE
GDAMHHLVERTLNWQRRAQQILQSCHLTELENGAETPPTLTRCASDCSETYTNTQAPCLT
PEWNKTNHAQTVFYTEHRCIPLQGLNRDLEELMVEGLLLQVSLPEVQTLHRVLLDRVASQ
HEASACVSPPRDDSADYDTHVRFYSQGKKLKQNTKMRDALMAPEKKAKRHLEREALSGDR
RPRDTKHSHKRQKMDKKESQHRAASNLSSPRSDVSQSDDSDDDMAVCPAERCQLPEGDEV
DWVQCDGSCNQWFHQMCVGVTAETAEKEDYICVRCALSNNAHVGK
NT seq 4638 nt   +upstreamnt  +downstreamnt
atgagccagcctcggccggacgagttcaagcctccaccggagtgcccggtgttcgagccc
agctgggaagaattcgccgacccgtacgccttcatcaacaagatccgtcccatcgccgag
aaaacgggcatttgcaaagtccgaccgcctcagggttggcagcctccatttgcttgcgac
gttgacagacttcactttgttcctcggatccagaggctcaatgaattggaggcccagact
agagtcaagctgaactttttggatcagattgccaaattctgggatttgcaaggatgttcc
ttgaagattccgcacgtggaaaggaagattttggatttataccagctgaacaagttagtc
gcggaggaaggcgggttcaacattgtctgtcgggacagaaggtggaccaagatcgcgatg
cagatgggcttcgcccccggcaaagcggtcggctcacacctgcgaggacattacgaaaaa
accctctacccttacaatctctttcaaagtggcgcaaacctgctgacaccagaggcatct
tccaaactgatgtgtttggaggcttatcccgacctccaaaagtgtgttcaaaaggcagcc
cacccagaggacagtcccggaaatgtggatcacgtcgacaacgcggagcccaaactgcag
gaggcgcttcagaggcaacccctccagacggctgattcctgccccaacgctcgcagaggg
aaacgcaccaagtatgagtcggtcagcgtgaagcccgaaccgggcgagccaggtgagaat
cgtccgaacttgcggaggaggatgggctcgttcgtcgccaagccagaaccggagaaagag
attcccattcaagtaaaacaggagccggcggaagtcaaagaagcggtcgtcgaggaggac
aagttcaagcaacgctacaagaagtacattccatctcttcctccaaatccagtggatctg
gtcgtgtgtctggtttgcggtagtgggggggacgaagaccgcctgttgctatgcgacggc
tgtgacgacagctaccataccttctgcctcattccccctttgacggacgtccccagggga
gactggaggtgccccaagtgtctggctcaggaatgtagcaagcctcatgaagcttttggg
tttgagcaggcttaccgagactactccctgcgtgcttttggtcaaatggcagatgcgttc
aaatcagattattttaacatgccagttcatatggttccgacagagttggtggaaaaagag
ttttggcgcttggtgggagccatcgaggaggacgttaccgtcgagtatggagcagatatt
gcgtcgaaggagtttgggagcgggttccccatcccgaacgggaaatttaaggtctcgcct
gatgatgagaaatacctgaagtgcgggtggaacctcaacaacatggcgatgatgaatccg
tccgtcctcacgcacgtgacggcggacatctgcggaatgacgttgccgtggctttacgtt
ggcatgtgcttctcgtctttctgttggcacatcgaggaccactggagctactctatcaac
tacctgcactggggggaacccaaaacctggtacggagctcccgggttcgctgcagagcag
ctagaggaggtgatgaagaagttggccccggagctgtttgaatctcagcccgaccttttg
caccagctggtcaccatcatgaaccccaatacgctaatggctcacggtgtccccatttac
agaacaaatcagtgcgctggtgagtttgttgtcacctttcccagagcttaccacagtggc
ttcaaccaaggcttcaactttgcagaggcagtcaacttttgtactgttgactggatgtct
ctcggtcggcagtgtgtcaatcactatcgcatcctccaccggtacaatgtcttctcccac
gatgaaatggtgtgcaacatggcagcgaaagcggaggccctcgacgtggtcctggcatct
gctgtccacaaagacatggccgccatgatcctggaagagcaggaactaagggaaaaagtt
tccaagatgggattagtccattggcaggaggcaaaatatgatcacctgcaggatgacgag
cgacagtgtgccaagtgccggaccacctgttacctgtccgccatcacctgcccctgcagc
ccaggagtgctggtctgtctgcatcacatcagcgacctgtgctcctgcccagtcacaaac
tacacactgaattacagatacacactggaggacctgttacccatgatgaacgcttcgaag
cagcgtgctgaacagtacgacgcgtgggcctctcgtgtgtccgagactctggaggctaaa
ctggaaaagaagaaaggcttgccggttcttcgctctcttcttgccgaatcggaatccgag
cgcttccctgaaaatgacctgctgcgccggctgcgcctcgtcacccaagatgcggagagg
tgctcctcgttggcgcagcagctgctgaacaggaaaaggcagacgaggtatcaatgtggt
attgggaaatcccgaagccagttgaccgtggaggagctgagttcctttgtaaggcagctg
tataacctctcgtgcagcctcactcaagcgcccttgttgaaggaactcttgaaccgcatt
gaagacttccagcagcacagcgagaagctcctagccgacgagtctcccagcgtagctgag
atccagagcctgttagacgtcagcttcgagtttgacgtggacctgcccgagctgccgcgt
ttaagggagcggctagaacaggctcgatggctggagggggtggagcaagccttcatccag
cctggaactttgactttggaaaccatgcgcaggctgattgaccagggcgtgggtctggca
ccgcactcgtctgtggagaaagcgctggcgcaccttcaggaacttctgaccgtgtcggag
cactgggaggacaaggccagcagtcttctcaaggccagaccacctcactccatcgagacc
ttgagtgcagctgctgacgaagtgtctggcatctcttctcacctccccaattgcctcctc
ctcaaggacaccatcagaaaagctcttgagtggcttcaggaagccgaggagtttcaggct
aacgactgcgttttaatggtggacaacttatcggatatggtgcttcgaggacaagccatt
caggtccatctggagcctttagacagactggagtatttaatggcggaagtaagaggctgg
aaagaatccgctgcttccgttttccttcagaaggacacggcctgtactctacttgagacc
ttgtgtccaagatgcgaggtgggaaatgaaggttcccctaagcggaaggccaagaaagga
aaggaattgccgaaaaataacaagaagaaaacgacgaggctcaacactgccagcgatgtg
gagaaagcgctttcggaggccaaggattcggcctctgttaatgcaactctggaggctctg
cgggtcagggagatggaggccttctgtcacctgagagtagcgaatgagtcgaagctcctc
cccaccgcagactgcacggatttgaaggtgtgcgtctgtcagaaggcgctcatgggcgcg
atggtgcagtgcgaactctgcagggacgcgttccacagcgtgtgcgtcagggactggtcc
gacctcggcgacgcgccgccgtggctctgcccccggtgtcagcgatccagaaaaccgcca
ctgaataaagttcaacctctgctggcgtccctaagacgaatcagagtgcgactgccggag
ggggacgccatgcaccacctggtcgagagaacgcttaactggcagcgtcgcgcccagcag
attcttcagtcttgtcatttgacagaactggaaaacggagcagaaacgcccccgactttg
actcgctgtgcgtcggattgctctgagacttacaccaacactcaggcaccttgtttgact
ccagagtggaacaagacaaatcacgctcagacggttttctacacagaacacagatgcatt
ccactgcaggggctgaatcgggacctggaggagctgatggtggaaggtctcctcctgcag
gtgtcactgccagaagtccagaccctccaccgggttttattggacagggtcgcgagccag
cacgaagccagcgcgtgcgtctctccgccgcgggacgactccgcagactacgatacacac
gtgcggttttactctcagggaaaaaaactcaagcagaatactaaaatgagggacgctctg
atggcgccggagaagaaagccaaaaggcatttggagagggaagcgctcagcggggaccgg
cggccgagggacacgaagcactctcacaaaaggcagaagatggacaaaaaggagtcgcag
cacagagcagcctccaatctgtcctcgccgcgttccgacgtctcgcagtccgacgattct
gatgacgacatggccgtgtgtcccgcggagaggtgtcagctccccgagggggatgaggtg
gactgggtccagtgcgacggcagctgcaaccagtggttccaccaaatgtgtgttggggtc
acagctgagacggcggagaaggaggactacatttgtgtccgatgtgcactgagcaacaac
gcacacgtggggaaatga

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