Syngnathoides biaculeatus (alligator pipefish): 133514986
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Entry
133514986 CDS
T09681
Symbol
nfascb
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04514
Cell adhesion molecule (CAM) interaction
sbia04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133514986 (nfascb)
04517 IgSF CAM signaling
133514986 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133514986 (nfascb)
Cell adhesion molecules [BR:
sbia04515
]
Immunoglobulin superfamily
L1 family
133514986 (nfascb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
V-set
Bravo_FIGEY
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_PDGFR_d4
Pur_ac_phosph_N
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
133514986
NCBI-ProteinID:
XP_061703143
LinkDB
All DBs
Position
2:30678096..30693183
Genome browser
AA seq
1243 aa
AA seq
DB search
MSFSGTLEEMLNHAEDEKEGGFWFPRQLGERKRKEQQFATSRVKMGTSLRPALLMLFWQS
VWALDVPPEIRQPPSILKQSMKEHIVDPKDVMVIECEAKGNPHPIFSWRRNGKYFNVARD
PQTTMRRRSGTLDIAAWNNPEQYEAEYQCIASNEYGSAYSHRIRLQLYRAPVWPREIVEP
VVISAGSPLVLSCDPPAGPPKPETYWMSSCSYARPFNWPIQTAFPTMHAVRQDRRVSMGV
NGDLYFSNVLLDDSASDFCCSARFPYKNAIQQKMPVVVKVLTTQAVVEAAPTWLSPTGSS
SSVLVLLGEELLLECIAAGVPTPHISWTKDGEDLALTPRIQIKRFNKMLEIPKATFQDAG
EYVCTATNKIGSVQHTLSVTVKAAPFWLEKPENLVLAPEESGRLLCRSDGAPRPAISWFV
NGEPIEAATPQANRHVSGDTLTLSGVTATDTAVYQCNASNPFGYLLANAFVNVLHARARI
LGVKNELIKVVEGGRTFLDCRYFGSPVPDLRWSKHGQGNLEGNRFQTHSNGTLEIRRTNA
EDQGIYVCAVSNVAGRDESQVRVEVKEPTLITKRPQDTKVIRGSDVRLECGVKADVTTPV
TTDWLKDKKPLTLGRRISLDESNLVISNANGRDAGVYTCVIESELDQKTASARLTVMDYP
DPPSKLELSDPYERTVRLTWLPGDSNFSPITEYLVQYDDDDWLPGKWKNLSTYPGSLTSV
VLHLSPFTYYEFRVIAINEIGPSRPSRPSMRFQTSGARGFHAPPLGRVTPSPFTIATGFI
APDVIPKNVKGVGTWTNNMEISWEPLTYREWNGPHLKYLVWWRRRDSREEWKNGTTKWLK
YYIYDADTFTPYELKVQAVNDFGLGPESPVVIGYSGEDRPVSAPQNLRLSDIRSTRVTLH
WDPVAQSSIMGQLKEYKVYFWRDSSQLRRLRVNRAMRSQVFADAGPEPSGVLAELVPYSN
YKMYIVVANSRYEGPASNSVHFSTPEGVPSAPTSFRIQQRHLDSIYVDWELPAEPNGIIS
GYSLKYQTVNATKGEEQRVEEFLANVTSFSLRRYDRYTRYRFSVAARTRMGLGEWHTEES
PHYTTEIYAQDQVDISTKGWFIGIMCAVALIVLMLLVVCFIKRSRGGKYPVREKKDISLE
PTDDIDQEGSFDYRSLERITRVTTLPYPRWEDERSPPSKEDLTSRRSESDDSLVDYGDGG
DVPYSEDGSFIGQYTAQRRDVRDLDFGGGLEHHSPANAIYSLA
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttccggcacgctggaggagatgcttaaccacgctgaggatgagaaggaagga
gggttctggtttccacggcaactaggagaaaggaagcgaaaggagcagcagtttgcgacg
agccgagtaaagatgggcacgtcgctccgtccggcactgttgatgctcttctggcaaagc
gtttgggctttggacgtccctccggaaatccgacaaccgccgagcatcctaaagcagtca
atgaaggagcatattgttgaccccaaagacgtcatggtcatcgagtgcgaggccaaggga
aacccgcatccaattttctcatggaggcgcaacgggaagtatttcaacgtggcacgggac
ccgcagacaaccatgcgcaggcgctcggggacgctggacatcgccgcctggaacaatcca
gaacagtacgaggcagagtatcagtgcatcgcctccaatgagtacggctcggcgtactct
catcggatcagactccaactctacagggctcccgtgtggccgagggagatcgtggaaccg
gtggtgattagcgctggttcacctttggtcctgtcctgtgaccctccggcagggccacct
aaaccggaaacctactggatgtctagctgctcctacgccagacccttcaactggccgatt
caaacggcgttccccaccatgcacgccgtgcggcaggaccgtcgggtgtccatgggggtc
aacggggacctgtacttctccaacgtcctactcgacgactctgcctcggacttctgctgt
agcgcccgcttcccctacaagaatgcaatccagcaaaagatgccggtagtcgtcaaggtt
ctcacgacccaggccgtggtggaggctgcccccacctggctgtctccaaccggatcgtcc
agttctgttctggtcctgctgggggaggaactactgctggagtgtattgctgcaggagtg
ccaactcctcatattagctggacaaaggatggcgaagacttggcactgaccccacgcatt
caaatcaaacgcttcaacaagatgcttgaaatcccgaaggcaactttccaggacgcgggc
gagtacgtctgcaccgcgaccaacaagatcggctccgttcagcacacgttaagcgtcaca
gtcaaagcggctccgttctggctagaaaagcctgaaaatttagttttggctccggaggaa
agcggccgcttgctgtgccgctctgacggcgctcctcgtcccgcaatcagctggttcgtc
aacggagaaccaattgaggctgccacgccacaagccaacagacacgtgtcgggggatacg
ctaaccctcagcggcgtgaccgccacggacacggccgtctaccagtgcaacgcctcaaat
ccgtttggctacttgttggccaatgcttttgtcaacgttttgcacgccagggcccgcatt
ctcggggtgaagaatgaactcatcaaggtggtggagggcggtcgcaccttcttggactgc
cgctacttcggctctccggtgcccgacctgcgatggtccaaacacgggcagggcaacctg
gagggaaatcgtttccagacgcacagcaacggcacgctggagattcggcgcacaaacgcg
gaggaccagggaatttacgtgtgtgccgtcagcaacgtggccggtcgcgacgagagtcaa
gttcgtgttgaggtcaaagaacctaccctgatcaccaaaagaccgcaggatacgaaagtc
atccgcggaagcgacgtgcgtctggaatgcggcgtgaaagccgacgtcacgactcccgtc
acgaccgactggttgaaagacaaaaaaccgctcacgttaggacggagaatatccctggat
gaatcgaatttggtcatcagcaacgcaaacgggcgcgacgccggcgtctacacgtgcgtc
atcgagagtgaactggaccaaaagacggcatcggcgcgcctcacggtgatggattatccg
gatcctcccagcaaactggagctgtcggatccgtacgagcgtaccgtcagactcacgtgg
ctccctggcgacagcaacttcagccccattacagaatacttggtccaatatgatgatgac
gactggttacccggaaagtggaagaacttgtccacataccccggaagcctgacctctgtc
gttctgcacctttcgccgttcacgtactacgagttccgagtcatcgccatcaacgaaatt
ggcccgagtcgcccgagtcgcccgtcgatgcgcttccagaccagcggtgcacgtgggttt
catgctcccccgctggggagagttacaccctcaccatttacaatcgctaccggttttatc
gctccagatgtcatcccgaagaatgtaaaaggagttggaacctggactaacaacatggag
atcagctgggagcctctaacttacagagagtggaacgggcctcacctcaagtatctggtc
tggtggcgaaggagagattccagagaggagtggaagaacggcaccaccaaatggctgaaa
tattatatttacgacgcggatacatttactccttacgagctcaaggtccaggccgtgaac
gacttcggtctcggtccggagtctcccgttgtcatcggttactcaggggaagatcgtccc
gttagtgcgccccaaaacctgcgactgtcagacattcggagcacacgggtgactctacac
tgggacccggtggcgcagagctccatcatgggacaactcaaagaatacaaggtctacttc
tggagggacagcagccagctgaggcggctgagagtcaacagagcgatgaggtcccaagtg
tttgcagacgccggtcccgagccttcgggggttctcgcggagctcgtcccttacagcaac
tacaagatgtacatcgtggtggccaacagtcgatacgaagggccggccagcaacagtgta
cacttttcgacacccgagggagtcccgtcggctcccacatccttcaggatccagcaacga
cacctcgacagcatttacgtggactgggagctgccggccgaacccaacgggattatcagc
ggatactccctcaagtaccagacagtgaacgccaccaagggagaggagcagagagtggag
gagttcctcgccaatgttacgagtttctcactgcgccgatacgaccgctacacccgatac
cgattctccgtagccgctcgaactcgaatgggtctgggggagtggcatacggaggagtcg
cctcactacaccaccgagatctacgcccaggatcaggtggacatctccactaagggctgg
ttcatcgggatcatgtgcgctgtggccctcatcgtcctcatgctcctcgtcgtgtgtttc
attaagagaagccgaggcggcaaatacccagtccgggaaaagaaagacatttccttagaa
cccacggatgacatcgatcaagagggttcctttgactatcggtctcttgaaaggataaca
cgcgtcacaaccttgccctacccgcgctgggaggacgaaagaagcccaccttctaaggaa
gatcttacctcgagaaggtcagagagtgacgacagtctggtggactacggggacggagga
gacgttccgtacagcgaggacggatccttcatcggccagtacacggcgcagaggagagac
gtgagggacttggactttggcgggggtctggagcatcactcgccagcgaacgccatctac
tcgctggcttga
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