Syngnathoides biaculeatus (alligator pipefish): 133515120
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Entry
133515120 CDS
T09681
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03440
Homologous recombination
sbia03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133515120 (top3a)
03460 Fanconi anemia pathway
133515120 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbia03032
]
133515120 (top3a)
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133515120 (top3a)
Enzymes [BR:
sbia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
133515120 (top3a)
DNA replication proteins [BR:
sbia03032
]
Eukaryotic type
DNA Topoisomerases
133515120 (top3a)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
133515120 (top3a)
FA (Fanconi anemia) pathway
133515120 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Lar_restr_allev
HisG
T6SS_TssG
DUF2256
Motif
Other DBs
NCBI-GeneID:
133515120
NCBI-ProteinID:
XP_061703408
LinkDB
All DBs
Position
16:15141789..15156739
Genome browser
AA seq
1015 aa
AA seq
DB search
MQVVKLLGKQLLRLGQRRPGIQLRCCSAAKDSETLNVMPRGQIKRVLCVAEKNDAAKGIS
EIMSNGRSMRREGLSKFNKIYEYECHLFGQNVTVAMTSVSGHLLALEFKAPYNKWLSCNP
VLLFDAEVEKYCPDGMIKIKHTLEKEVRQCQALIIWTDCDREGENIGFEIINVCKAVKPN
LPVFRAKFSEITPNSIRRACETLSQPDINVSDAVDVRQELDLRIGASFTRFQTLRLQKIF
PLSLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIRVLHDVEGDTVEFGWKRHRL
FNHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVELEKLASRKLRISAKEAMKT
AEKLYTQGFISYPRTETNIFPESLALAPLVEQQMQSPDWGAFAQRVLDQPGGPNPRRGKN
SDQAHPPIHPTKYTNTLQGNEGRLYEFIVRHFLACVSQDALGQETIVDIDIARETFSTSG
LMIIAKNYLDVYPYDKWSAKVIPVYEQGSQFQPSAIEMVDGETSPPQLLTEADLISLMEK
HGIGTDATHAEHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNAMGYEMSKPHLRAELE
ADLKLVSEGRKDRGSVLQHHIQKYKAVFVESVRKAKKLDEALSPYLGAAQEIHETEQQDM
EVPLPVRKCPHCGRDMLLRKRKEGNGKFLSCVGFPTCKAAVWFPDTVLEVSRDDSICSTC
QPQPVHMLKFKFRRGSIPAILPLEFVGCIGGCDETLREVLDLKYLRGAGQGGVAAREDPH
QNALRPPQPWASSSNPTPSAPPSAPSWNPQPRPPPGGNSISAHNNSDGIVCNCGNDAILL
TVRKEGPNQGRQFYKCNSGACNFFLWKDEPMQQGPLQNHWPPPPPAPPRISQLPQQSLGC
RNTRVGSGPQGGTEGMMCNCNEATVTRVVQKDGPNKGRLFHTCGKPRDQQCNFFQWADEN
VSPQGAFGGGELNSNRNGVKKGRKITGDKPTVAKKPRSCGICHMPGHTRVTCPQR
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtagtgaagctcctgggaaaacaactgcttcgactgggacaacggaggccgggt
atccagctgaggtgttgttctgcggcgaaggactcggaaacattaaacgtgatgcccagg
ggtcagatcaagcgggttctctgcgtagccgagaagaatgatgctgccaaaggaatctcc
gaaatcatgtccaatggcaggtccatgaggagggaaggactgtccaagtttaataagatc
tatgagtatgagtgccatctctttggtcaaaatgtgacggtagcaatgacatcagtctca
ggccatttactggctcttgaattcaaagctccttataacaaatggctcagctgcaatcca
gtactgttgtttgatgctgaagttgagaagtattgtccagatggcatgataaaaattaag
catacattggaaaaggaggtgagacagtgccaggccttaattatctggactgactgtgac
agagagggagagaacattggttttgaaataatcaatgtctgtaaagccgtgaagcctaat
ttgccagtgtttcgagcgaagttttctgaaatcacccccaactccattcggagagcatgt
gagacactatcacagccagacatcaacgtcagtgatgctgttgatgtccgccaagaactc
gaccttaggataggtgcatccttcacccgcttccagactcttcgcctacagaagatcttc
ccattgtctctggccaatcagctcatttcttatggcagctgccagtttcccactttgggc
ttcgtggttgaacgtttcaaagccatccaggctttcattcctgagacattctacaagatc
agggtcctacatgatgtggagggggacacggtagagtttggatggaaaagacaccgtctc
ttcaaccacaccgcttgtctagtgctctaccaaatctgcatggaggatcccatagcaacc
gtcacctcagtaaccagtaagcctaagagcaaatggaggccgctgcctttggacactgtg
gaattggaaaaactggcttctcgaaagctgcgcataagtgctaaagaggcaatgaaaact
gccgaaaaactttacacacaggggtttatcagctaccctcgcacggaaacaaatattttc
ccagaatcccttgctcttgcccccttggtggagcaacagatgcagagtcctgactggggg
gcattcgcccagcgagtgcttgaccagcctgggggtcccaacccgcgacggggcaaaaat
tctgaccaagcccatccccctatccaccccactaaatacacaaacacattgcagggaaat
gaagggcgtctgtatgagttcattgtccgtcacttcctggcttgcgtatcccaggatgct
ttgggtcaggagactattgtggatatagacattgctcgagagacgttttccacttcggga
ctcatgatcattgcaaaaaattatcttgatgtttatccctatgacaaatggagcgctaag
gtgattccagtatatgaacaaggctcccagttccaaccctctgccatcgagatggtggac
ggtgagacgagtcctccacagctgctcactgaagccgacctcatatcattgatggagaag
cacggcattggcacagatgcaacacatgcagaacacatcgaaaccataaaaagtcgcatg
tacgtgggcttgacagctgaccaacggtttctccccggggagctcggcatgggactggtg
gaaggttacaacgccatgggctatgagatgtcaaaaccccacctgcgcgctgaactggag
gcagacctgaagctcgtgtcagaggggaggaaggaccgagggagcgtgttgcagcaccac
atccaaaaatacaaggctgtcttcgttgagtcggtccggaaggcaaagaagttagatgaa
gctctgtcgccgtatttgggtgctgctcaggagatccatgaaaccgagcagcaagacatg
gaggttccactccctgtcaggaagtgcccccactgtggtcgtgacatgttgctgaggaag
cggaaggaaggaaacggtaagttcctgtcctgtgtgggcttcccaacctgcaaagcagct
gtatggtttcctgacacggtgctggaggtcagccgagacgacagcatttgttccacctgc
cagccgcagcccgttcacatgttaaagttcaagttccgtcggggcagcattcccgccatc
ttgcctttagagtttgtcggctgcatcggcggatgtgacgagactctccgagaggtgctg
gaccttaaatacctcagaggagcaggacaaggaggagtggcagcaagagaggacccccat
caaaatgccttgaggccaccacaaccttgggcgtcgagttcaaacccgacgccgtccgct
ccgccctccgctccttcttggaacccacaacctcgtccaccaccagggggcaatagtatc
agtgcacacaacaacagcgatggcattgtgtgtaactgtggtaacgatgcaatcctgcta
actgtgcgcaaagaagggcccaaccaaggacggcaattctataaatgcaattcaggagct
tgtaatttttttctgtggaaggatgagccgatgcagcaggggccgctgcagaatcattgg
cctccaccgccacctgcgccaccgagaatctcccagcttccccagcaatccctggggtgt
aggaacaccagagttggcagtgggcctcaggggggcacagaaggtatgatgtgtaactgt
aatgaggccacagtgacccgcgttgtgcagaaggatggaccgaacaaggggcggctgttt
cacacgtgcgggaaaccaagagaccagcagtgtaacttcttccagtgggcggatgaaaac
gtctcaccacaaggtgccttcggaggcggcgagttgaacagcaacagaaacggcgtaaag
aagggaagaaagataacgggggacaaaccaaccgttgccaagaaacctcgctcctgcgga
atctgccacatgccaggacacacacgggtcacttgtcctcagcggtga
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