Syngnathoides biaculeatus (alligator pipefish): 133515146
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Entry
133515146 CDS
T09681
Symbol
ccdc187
Name
(RefSeq) coiled-coil domain-containing protein 187 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133515146 (ccdc187)
Membrane trafficking [BR:
sbia04131
]
Autophagy
Other autophagy associated proteins
Others
133515146 (ccdc187)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
PEX6_4th
Motif
Other DBs
NCBI-GeneID:
133515146
NCBI-ProteinID:
XP_061703461
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All DBs
Position
2:31086196..31101248
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AA seq
776 aa
AA seq
DB search
MAELQIDQSNLPRVQEVCQSFAVLEDGALAQSLQAQETARYNKALTTTDGDGRWQTIFRI
GPELSNVEQYYTTNVQKSRLVQNDIRVAKRLQDEEEAQRTLQRDLLRQESRELEEQDLEY
ARVIQEEIRRRAEEARRRERDDEEMAKRMQEEEELRMRRSRTEEERHRRREGSAGGSAPP
SPNRHPLGGQHPGAAAARWRSSNTWNPPDYSWPPPPPYYPAGVADNQSPTWWSSEGHTHS
RRQLRRESQASPRAHADFFERRPNTRNNTPPLRRRLSLRLPRERDRTSLYTANGVRETFY
DDNERQEKRSARDRERELDHRAQNTTRSHQDGAPRSPEARERRCRRGESLRIHDRPGPGR
GDASGTWSTRDDSDKRVRFAPGDGGSGGRSDPGARVWEMLGHVLRERGVAVTLGGRGAPL
KIGPQRPDGQASPRPHQRAAAGHSFHGDRRASSRRDDSEPDCGTSEGDAPSQTRGTRRRR
PDRGSVASQETLARTPGGGGQREGEAEPEPERRLRRSLSSPWVRWRRAAAGASLPPKKRQ
TGLDLGDLQQVLLDEELARELQEQEQEQETETTTSERVRKGSQPRPRSPDSTGDFRVAQV
AQDEEIARYMQKQEIQLDRTSRESEGAAEAWREHRAVVGHCDRRTARDKQAPRQRQRLDS
EGLPSPAEDSSPENGPPDRADPPSLVSGQSQRVQNVAEELDPTFQAKRQGADVLGTGQSG
GAGCQSLPEAPTFIPPTKRQKDKDGRAKPKEKKESFGPPALYSRKAQEPIPFLFFL
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctccagattgaccagtccaacctcccccgtgttcaggaagtgtgccagagt
tttgccgttttagaagacggcgcgctggcacaaagtcttcaggcccaggaaactgcccgt
tacaataaagctttgacgacgactgacggggatgggcgatggcagacgatatttcgtatc
gggccggaactctctaacgtcgagcagtactacaccaccaacgtccagaagagccgactg
gtgcagaacgacatccgcgtggccaagcggctccaggatgaggaggaggcgcagcggacc
ctgcaaagggacctgctcagacaagagtccagagaactggaagaacaggacctggagtac
gcccgcgtaatccaggaggagatccggcggcgggccgaagaggcccggaggagggagcgg
gatgacgaggaaatggcgaaacggatgcaggaggaggaagagctgaggatgaggaggtcc
agaacagaggaggagcgccaccgccgccgtgaaggcagcgccggcggttctgcaccgccg
tcaccaaatcgacacccgctcggcggacagcatccgggcgcggccgccgccaggtggcgc
tcttctaacacttggaaccctccagattacagctggccccctcctccgccttactaccct
gccggggtagcagacaaccaaagtccaacttggtggtcaagtgaaggccacacgcattcc
cgccggcaactcaggagggaaagccaagcgtcgccgcgcgcacacgccgatttctttgaa
cggagaccgaatacgaggaacaacacgccgcctctccgtcgccgcttgtctttacgcttg
cctcgcgagagagaccgcacgagtctttacaccgccaacggcgtccgagagaccttctac
gatgacaacgagcgtcaagaaaagaggagcgcacgggaccgggaacgggaactggaccac
cgagcgcaaaacaccacgcggagccatcaggatggagccccgagatcacccgaggcccga
gaacggcgctgcaggcgcggtgaatctttgcggattcacgaccggcccggaccgggcaga
ggggacgcgtccgggacgtggagcaccagagacgactccgacaaacgcgtccgcttcgcg
ccaggcgacgggggctccggcggacgctcggaccccggcgcgcgggtctgggagatgctc
ggccacgtcctcagggagcggggtgtcgccgtcacgttgggggggcgcggcgccccgctg
aaaataggaccccaaaggccggacggccaagcctccccgagaccacatcagagagccgca
gccgggcacagtttccacggcgacaggagggcgtcatctcgccgggacgacagcgagcca
gattgcggaacatccgaaggcgacgctccttctcagacccgcggcacaaggcggcggcgg
cccgaccgcggaagcgtcgcaagccaggagacgctcgcgaggacccccggcggcggcggc
cagcgggaaggagaagcggaaccggagccggagcggcgacttcggagaagcctcagcagc
ccctgggtcaggtggagacgcgcggcagcaggagcgtcgctgccccccaagaagaggcag
accggcctggatctgggggacctgcagcaagttctacttgatgaggagctggcccgcgag
ctgcaggagcaggagcaggagcaggagaccgagaccaccacttcggaaagagtccgcaaa
ggctcacagcccaggccacgtagccctgactccacgggagacttccgggtcgcgcaggtg
gcccaggatgaggaaatcgctcgctatatgcaaaagcaggaaatccagttggatcgcacg
tcacgggagtcggaaggagcggcggaggcgtggcgggagcaccgagccgtggtgggccac
tgcgaccggagaacggcgcgagacaaacaggcgccgaggcagaggcagaggctggattcc
gagggcctcccttcccccgccgaggactccagtccggagaatggacctcccgaccgcgcc
gacccgccgagtcttgtttccggccaatcccagcgggtccagaacgttgcggaggagctg
gacccgaccttccaggccaagaggcaaggagcggacgtcctcggaacgggacaaagcggc
ggtgccggttgtcagtcgcttcctgaggcgccgaccttcatcccgcccaccaagcgtcaa
aaggacaaagacggccgggctaaacccaaagaaaagaaggaaagtttcggcccaccagca
ctttacagcagaaaagctcaagagccaattccgtttttattcttcctgtaa
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